CF833475

Overview
NameCF833475
Unique NameCF833475
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length467
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF833475 vs. ExPASy Swiss-Prot
Match: SEP1_ARATH (Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana GN=SEP1 PE=1 SV=2)

HSP 1 Score: 59.3066 bits (142), Expect = 9.393e-11
Identity = 33/58 (56.90%), Postives = 40/58 (68.97%), Query Frame = -3 
Query:  310 EHQLETSLKHVRSTKTQCMVDQLSDLQKREQVLLELNKGLRKK------VQSYGFGGG 465
            E QL+ SLK VRS KTQ M+DQLSDLQ +EQ+LLE N+ L  K      V+S+  GGG
Sbjct:  129 ERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKLDDMIGVRSHHMGGG 186

HSP 2 Score: 28.1054 bits (61), Expect = 9.393e-11
Identity = 14/28 (50.00%), Postives = 17/28 (60.71%), Query Frame = -1 
Query:  255 NPMGSEE--AHIPVHAQNVTGFIPGWML 332
            NP+ SE+  A     AQ   G+IPGWML
Sbjct:  224 NPVCSEQITATTQAQAQQGNGYIPGWML 251
The following BLAST results are available for this feature:
BLAST of CF833475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
SEP1_ARATH9.393e-1156.90Developmental protein SEPALLATA 1 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_03L01_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa03L01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833475 ID=CF833475; Name=CF833475; organism=Citrus sinensis; type=EST; length=467bp
TTTTTTTTTTTTTTTTTGTTCGAGATAGCAGTTGTTCATATAAATACCAG
CCATACAACAACAAAAGAGCATTCCGTCATTTTCAAACATTACAAGTTGC
AACTTACAAACAACACTTATTACTGTTTGCAGCAAATAATAATTGCAGGT
TACATAAAGCAAAACAGATCAAATCACAACCATCAACAAGGAAATTAATT
AGAATGCCAATGATTAAGCTCATGTGAACTCATTTTATTATCCAATTATA
ATCAAAGCATCCAACCAGGGATGAATCCGGTGACATTTTGTGCATGGACT
GGAATATGTGCCTCCTCCGAACCCATAGGATTGTACCTTCTTCCTCAGGC
CTTTGTTAAGTTCAAGTAGCACTTGTTCTCTTTTTTGAAGATCGGAAAGC
TGATCAACCATACATTGAGTCTTTGTTGACCTAACATGCTTCAAGGATGT
CTCTAGCTGATGCTCAA
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