CF833601

Overview
NameCF833601
Unique NameCF833601
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length418
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF833601 vs. ExPASy Swiss-Prot
Match: ELI_PEA (Early light-induced protein, chloroplastic OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.397e-17
Identity = 43/65 (66.15%), Postives = 49/65 (75.38%), Query Frame = -3 
Query:  222 GVAWFLGTXXXXXXXXXVPLFKGVSVESKSDGFMTSDAELWNGRFAMMGLVALAVTEFVKGSTLV 416
            GVAWFLGT         +P F+GVSVESKS   M+SDAE WNGR AM+GLVALA TEFVKG++LV
Sbjct:  132 GVAWFLGTSVLLSLASLIPFFQGVSVESKSKSIMSSDAEFWNGRIAMLGLVALAFTEFVKGTSLV 196
[Close]
BLAST of CF833601 vs. ExPASy Swiss-Prot
Match: ELI5_HORVU (High molecular mass early light-inducible protein HV58, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.527e-15
Identity = 38/65 (58.46%), Postives = 46/65 (70.77%), Query Frame = -3 
Query:  222 GVAWFLGTXXXXXXXXXVPLFKGVSVESKSDGFMTSDAELWNGRFAMMGLVALAVTEFVKGSTLV 416
            G+AWFL T         +PL +G SVESKS G  ++DAELWNGRFAM+GLVALA TEF+ G+  V
Sbjct:  165 GLAWFLATAGVFSVASLLPLLQGQSVESKSSGIWSADAELWNGRFAMLGLVALAATEFITGAPFV 229
[Close]
BLAST of CF833601 vs. ExPASy Swiss-Prot
Match: DS22_CRAPL (Desiccation stress protein DSP-22, chloroplastic OS=Craterostigma plantagineum GN=DSP-22 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.113e-14
Identity = 36/65 (55.38%), Postives = 48/65 (73.85%), Query Frame = -3 
Query:  222 GVAWFLGTXXXXXXXXXVPLFKGVSVESKSDGFMTSDAELWNGRFAMMGLVALAVTEFVKGSTLV 416
            GV WFL T         +P+++G+S E+K++GF  SDAE+WNGRFAM+GLVALA TE+VKG  L+
Sbjct:  133 GVMWFLLTSAVLVLATLIPIYRGLSPEAKNNGFWNSDAEIWNGRFAMIGLVALAFTEYVKGGPLI 197
The following BLAST results are available for this feature:
BLAST of CF833601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ELI_PEA2.397e-1766.15Early light-induced protein, chloroplastic OS=Pisu... [more]
ELI5_HORVU6.527e-1558.46High molecular mass early light-inducible protein ... [more]
DS22_CRAPL1.113e-1455.38Desiccation stress protein DSP-22, chloroplastic O... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_03O12_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa03O12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833601 ID=CF833601; Name=CF833601; organism=Citrus sinensis; type=EST; length=418bp
TTTTTTTTTTTTTTTTTCAAACGGAAAAAGGGGTGATTTATTTACCAGAA
TTNGGCATGGGGAAAACAGAAGATTTACATACAACACCACCATTAATTCA
TACACAATTAATTAGCCACGGAAAGAAACATGAACGTGCGCTTCAAGTAT
TAAGAATAGGGGTCTTGTTATCATTTCAAGACTCTGCAGTCCGCATATCA
CTGGAAAATTGGACTTAACTAAACAAGGGTACTGCCTTTAACAAACTCAG
TGACAGCCAAAGCAACAAGACCCATCATAGCGAACCTCCCATTCCACAAC
TCAGCATCCGAAGTCATGAACCCATCCGATTTAGACTCCACGCTGACACC
TTTAAACAAAGGAACCAGGGACGCAACCGAAAGCAGAACACTGGTCCCCA
AGAACCAGGCAACTCCAC
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