CF833604

Overview
NameCF833604
Unique NameCF833604
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833604 vs. ExPASy Swiss-Prot
Match: ACSL6_RAT (Long-chain-fatty-acid--CoA ligase 6 OS=Rattus norvegicus GN=Acsl6 PE=1 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 7.321e-51
Identity = 95/181 (52.49%), Postives = 128/181 (70.72%), Query Frame = 1
Query:    4 IFKAYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMYA 546
            +FK Y KDE +TKE +D DGW HTGDIG W+P G LKIIDRKK+IFKLAQGEY+A EKIEN+Y + + V Q +V+GDS  + LV IV  D + +  WA  +GI+  N ++LC     + A+L DM  LG+E+ L  FE VKA+ +  + F+V+NGLLTPT K KRP+ ++YF K I ++Y+
Sbjct:  515 VFKGYLKDEDRTKEALDSDGWLHTGDIGKWLPEGTLKIIDRKKHIFKLAQGEYVAPEKIENIYIRSEPVAQIYVHGDSLKAFLVGIVVPDPEVMPCWAQKKGIE-GNYQELCKSKELKKAILDDMVMLGKESGLHSFEQVKAIYIHCDMFSVQNGLLTPTLKAKRPELREYFKKQIEELYS 694          
BLAST of CF833604 vs. ExPASy Swiss-Prot
Match: ACSL6_MOUSE (Long-chain-fatty-acid--CoA ligase 6 OS=Mus musculus GN=Acsl6 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 8.094e-50
Identity = 94/180 (52.22%), Postives = 127/180 (70.56%), Query Frame = 1
Query:    4 IFKAYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMY 543
            +FK Y KDE +TKE +D DGW HTGDIG W+P G LKIIDRKK+IFKLAQGEY+A EKIEN+Y + + V Q +V+GDS  + LV IV  D + + +WA  +GI+    ++LC     + A+L DM  LG+E+ L  FE VKA+ +  + F+V+NGLLTPT K KRP+ ++YF K I ++Y
Sbjct:  515 VFKGYLKDEDRTKEALDSDGWLHTGDIGKWLPEGTLKIIDRKKHIFKLAQGEYVAPEKIENIYIRSEPVAQIYVHGDSLKAFLVGIVVPDPEVMPSWAQKKGIE-GTYQELCMKKELKKAILDDMVMLGKESGLHSFEQVKAIYIHCDMFSVQNGLLTPTLKAKRPELREYFKKQIEELY 693          
BLAST of CF833604 vs. ExPASy Swiss-Prot
Match: ACSL1_MOUSE (Long-chain-fatty-acid--CoA ligase 1 OS=Mus musculus GN=Acsl1 PE=1 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.803e-49
Identity = 93/183 (50.82%), Postives = 128/183 (69.95%), Query Frame = 1
Query:    4 IFKAYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMYAEL 552
            +FK Y KD  +T E +D+DGW HTGDIG W+P G LKIIDRKK+IFKLAQGEYIA EKIEN+Y + + V Q FV+G+S  + L+A+V  D ++L +WA   G+Q  + E+LC +     A+L D+  LG+EA L+ FE VK + +  E F+++NGLLTPT K KRP+ + YF   I ++YA +
Sbjct:  516 VFKGYLKDPARTAEALDKDGWLHTGDIGKWLPNGTLKIIDRKKHIFKLAQGEYIAPEKIENIYLRSEAVAQVFVHGESLQAFLIAVVVPDVESLPSWAQKRGLQ-GSFEELCRNKDINKAILDDLLKLGKEAGLKPFEQVKGIAVHPELFSIDNGLLTPTLKAKRPELRNYFRSQIDELYATI 697          
BLAST of CF833604 vs. ExPASy Swiss-Prot
Match: ACSL5_HUMAN (Long-chain-fatty-acid--CoA ligase 5 OS=Homo sapiens GN=ACSL5 PE=1 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.355e-49
Identity = 96/183 (52.46%), Postives = 128/183 (69.95%), Query Frame = 1
Query:    4 IFKAYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMYAEL 552
            +FK Y KD  +T+E +D DGW HTGDIG W+P G LKIIDRKKNIFKLAQGEYIA EKIEN+Y + + V Q FV+G+S  S+LV +V  D D L ++AA  G++  + E+LC +   R A+L D+  +G+E+ L+ FE VKA+ L  EPF++ENGLLTPT K KR +  +YF   I  +Y  +
Sbjct:  500 VFKGYLKDPEKTQEALDSDGWLHTGDIGRWLPNGTLKIIDRKKNIFKLAQGEYIAPEKIENIYNRSQPVLQIFVHGESLRSSLVGVVVPDTDVLPSFAAKLGVK-GSFEELCQNQVVREAILEDLQKIGKESGLKTFEQVKAIFLHPEPFSIENGLLTPTLKAKRGELSKYFRTQIDSLYEHI 681          
BLAST of CF833604 vs. ExPASy Swiss-Prot
Match: ACSL5_MOUSE (Long-chain-fatty-acid--CoA ligase 5 OS=Mus musculus GN=Acsl5 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 4.017e-49
Identity = 93/183 (50.82%), Postives = 130/183 (71.04%), Query Frame = 1
Query:    4 IFKAYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMYAEL 552
            +FK Y KD  +T+EV+D+DGW HTGDIG W+P G LKI+DRKKNIFKLAQGEYIA EKIENVY++ + V Q FV+G+S  S L+ +V  D D+L ++AA  G++  + E+LC +   + A+L D+  +G+E  L+ FE VK++ +  EPFT+ENGLLTPT K KR +  ++F   I  +Y  +
Sbjct:  500 VFKGYLKDPEKTQEVLDKDGWLHTGDIGRWLPNGTLKIVDRKKNIFKLAQGEYIAPEKIENVYSRSRPVLQVFVHGESLRSFLIGVVVPDPDSLPSFAAKIGVK-GSFEELCKNQCVKEAILEDLQKIGKEGGLKSFEQVKSIFVHPEPFTIENGLLTPTLKAKRVELAKFFQTQIKSLYESI 681          
BLAST of CF833604 vs. ExPASy Swiss-Prot
Match: ACSL1_HUMAN (Long-chain-fatty-acid--CoA ligase 1 OS=Homo sapiens GN=ACSL1 PE=1 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 4.017e-49
Identity = 93/183 (50.82%), Postives = 128/183 (69.95%), Query Frame = 1
Query:    4 IFKAYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMYAEL 552
            +F+ Y KD  +T E +D+DGW HTGDIG W+P G LKIIDRKK+IFKLAQGEYIA EKIEN+Y + + V Q FV+G+S  + L+AIV  D + L +WA   G +  + E+LC +   + A+L DM  LG+++ L+ FE VK +TL  E F+++NGLLTPT K KRP+ + YF   I D+Y+ +
Sbjct:  515 VFQGYLKDPAKTAEALDKDGWLHTGDIGKWLPNGTLKIIDRKKHIFKLAQGEYIAPEKIENIYMRSEPVAQVFVHGESLQAFLIAIVVPDVETLCSWAQKRGFE-GSFEELCRNKDVKKAILEDMVRLGKDSGLKPFEQVKGITLHPELFSIDNGLLTPTMKAKRPELRNYFRSQIDDLYSTI 696          
BLAST of CF833604 vs. ExPASy Swiss-Prot
Match: ACSL6_HUMAN (Long-chain-fatty-acid--CoA ligase 6 OS=Homo sapiens GN=ACSL6 PE=2 SV=4)

HSP 1 Score: 194.512 bits (493), Expect = 5.246e-49
Identity = 93/181 (51.38%), Postives = 125/181 (69.06%), Query Frame = 1
Query:    4 IFKAYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMYA 546
            +FK Y KD  +TKE +D DGW HTGDIG W+P G LKIIDRKK+IFKLAQGEY+A EKIEN+Y + + V Q +V+GDS  + LV IV  D + + +WA   GI+      LC +   + A+L DM  LG+E+ L  FE VKA+ +  + F+V+NGLLTPT K KRP+ ++YF K I ++Y+
Sbjct:  515 VFKGYLKDPDRTKEALDSDGWLHTGDIGKWLPAGTLKIIDRKKHIFKLAQGEYVAPEKIENIYIRSQPVAQIYVHGDSLKAFLVGIVVPDPEVMPSWAQKRGIE-GTYADLCTNKDLKKAILEDMVRLGKESGLHSFEQVKAIHIHSDMFSVQNGLLTPTLKAKRPELREYFKKQIEELYS 694          
BLAST of CF833604 vs. ExPASy Swiss-Prot
Match: ACSL1_CAVPO (Long-chain-fatty-acid--CoA ligase 1 OS=Cavia porcellus GN=ACSL1 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 6.852e-49
Identity = 91/183 (49.73%), Postives = 128/183 (69.95%), Query Frame = 1
Query:    4 IFKAYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMYAEL 552
            +FK Y KD  +T E +D+DGW HTGDIG W+P G LKIIDRKK+IFKLAQGEYIA EKIEN+Y + + V Q FV+G+S  + L+AIV  D ++L +WA   G +  + E+LC +   + A+L DM  +G+++ L+ FE V+ + L  E F+V+NGLLTPT K KRP+ + YF   I ++Y+ +
Sbjct:  515 VFKGYLKDPAKTAEALDKDGWLHTGDIGKWLPNGTLKIIDRKKHIFKLAQGEYIAPEKIENIYVRSEPVAQVFVHGESLQAFLIAIVVPDAESLASWARKRGFE-GSFEELCRNKDVKKAILEDMVRIGKDSGLKSFEQVRGIALHPELFSVDNGLLTPTMKAKRPELRNYFRSQIDELYSTI 696          
BLAST of CF833604 vs. ExPASy Swiss-Prot
Match: ACSL1_RAT (Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus GN=Acsl1 PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 8.949e-49
Identity = 93/183 (50.82%), Postives = 125/183 (68.31%), Query Frame = 1
Query:    4 IFKAYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMYAEL 552
            +FK Y KD  +T E +D+DGW HTGDIG W+P G LKIIDRKK+IFKLAQGEYIA EKIEN+Y + + V Q FV+G+S  + L+AIV  D + L +WA   G Q  + E+LC +     A+L DM  LG+ A L+ FE VK + +  E F+++NGLLTPT K KRP+ + YF   I ++Y+ +
Sbjct:  516 VFKGYLKDPARTAEALDKDGWLHTGDIGKWLPNGTLKIIDRKKHIFKLAQGEYIAPEKIENIYLRSEAVAQVFVHGESLQAFLIAIVVPDVEILPSWAQKRGFQ-GSFEELCRNKDINKAILEDMVKLGKNAGLKPFEQVKGIAVHPELFSIDNGLLTPTLKAKRPELRNYFRSQIDELYSTI 697          
BLAST of CF833604 vs. ExPASy Swiss-Prot
Match: ACSL5_RAT (Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus GN=Acsl5 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.441e-48
Identity = 91/183 (49.73%), Postives = 130/183 (71.04%), Query Frame = 1
Query:    4 IFKAYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMYAEL 552
            +FK Y KD  +T+EV+D+DGW HTGDIG W+P G LKIIDRKKNIFKLAQGEYIA EKIENVY++ + + Q FV+G+S  S L+ +V  D ++L ++AA  G++  + E+LC +   + A+L D+  +G+E  L+ FE VK++ +  EPF++ENGLLTPT K KR +  ++F   I  +Y  +
Sbjct:  500 VFKGYLKDPEKTQEVLDKDGWLHTGDIGRWLPNGTLKIIDRKKNIFKLAQGEYIAPEKIENVYSRSRPILQVFVHGESLRSFLIGVVVPDPESLPSFAAKIGVK-GSFEELCQNQCVKKAILEDLQKVGKEGGLKSFEQVKSIFVHPEPFSIENGLLTPTLKAKRVELAKFFQTQIKSLYESI 681          
The following BLAST results are available for this feature:
BLAST of CF833604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
ACSL6_RAT7.321e-5152.49Long-chain-fatty-acid--CoA ligase 6 OS=Rattus norv... [more]
ACSL6_MOUSE8.094e-5052.22Long-chain-fatty-acid--CoA ligase 6 OS=Mus musculu... [more]
ACSL1_MOUSE1.803e-4950.82Long-chain-fatty-acid--CoA ligase 1 OS=Mus musculu... [more]
ACSL5_HUMAN2.355e-4952.46Long-chain-fatty-acid--CoA ligase 5 OS=Homo sapien... [more]
ACSL5_MOUSE4.017e-4950.82Long-chain-fatty-acid--CoA ligase 5 OS=Mus musculu... [more]
ACSL1_HUMAN4.017e-4950.82Long-chain-fatty-acid--CoA ligase 1 OS=Homo sapien... [more]
ACSL6_HUMAN5.246e-4951.38Long-chain-fatty-acid--CoA ligase 6 OS=Homo sapien... [more]
ACSL1_CAVPO6.852e-4949.73Long-chain-fatty-acid--CoA ligase 1 OS=Cavia porce... [more]
ACSL1_RAT8.949e-4950.82Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norv... [more]
ACSL5_RAT4.441e-4849.73Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norv... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_03O13_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa03O13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833604 ID=CF833604; Name=CF833604; organism=Citrus sinensis; type=EST; length=758bp
CTAATTTTCAAGGCCTATTATAAAGATGAAATCCAGACAAAAGAAGTTAT
TGATGAAGATGGATGGTTTCATACTGGAGATATAGGAATGTGGATACCCG
GTGGTCGTCTAAAGATTATTGATAGGAAGAAGAATATTTTTAAGTTAGCG
CAGGGAGAGTACATAGCTGCAGAGAAAATTGAGAATGTATATGCCAAGTG
CAAGTTTGTTGGTCAGTGCTTTGTCTATGGTGACAGCTTCAATTCAGCTT
TGGTAGCCATTGTCTCAGTGGACCAAGATGCTTTAAAAGCATGGGCTGCA
TCTGAAGGCATTCAGTATGAAAACTTAGAGCAACTTTGCAATGACCCAAG
AGCGAGGGCTGCTGTGTTGGCTGATATGGATTCCCTAGGAAGAGAAGCTC
AGTTGAGAGGCTTTGAATTTGTAAAAGCTGTGACTTTGGTGCTCGAGCCA
TTCACAGTGGAAAATGGACTGCTCACTCCAACATTTAAGATAAAGAGACC
ACAAGCAAAGCAATACTTTGCAAAAGCCATAGCGGATATGTATGCTGAGC
TTTCTAGATCTGATCCCTCACCAAATACATTGTGAAGACCATCAAAATCA
CAGATGTGTAGAATTAAGACTGCATTTCAAGATTTAGCTTTAGCAGATGT
CCCACAATAAGTAACGACCGGTGTCGAGGCATTCCTTGTTTGTTCTTTAA
TTGTTTTGCCAAAATAAAGGGAAATTCAAATATTTAAGCAGCCCCTCTCT
GTTGATAT
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