CF833605

Overview
NameCF833605
Unique NameCF833605
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length802
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF833605 vs. ExPASy Swiss-Prot
Match: FUK_HUMAN (L-fucose kinase OS=Homo sapiens GN=FUK PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 2.133e-19
Identity = 69/271 (25.46%), Postives = 121/271 (44.65%), Query Frame = 1 
Query:   16 ERAGCVLNVAIPLESSLPIGTIIETTKMSGVLIS-----DDAGNQLHIEDLTPIATPFDHNDPFRLVKSALLVTGVIH--------EKLIESMG--LQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLEQLMXXXXXXXXXXXXLYPGIKFTSSFPGIPLRLQVIPLLASPQLILELQQRLLVVFTGQVRLAHQVLQKVVTRYLQRDNLLISSIKRLTELAKNGRDALMNCDVDELGKIMLEAWRLHQELDPHC 783
            E  G VL +A+ ++   PIG          + ++     D+   ++    L  +      + P  L+K+A +  G++H        E+L+ + G   ++ TW+ +P GSGLGTSSILA   + AL +        E +   VL LEQ++            L PGIK   S   +PL+++V  +      + +L   LL+V+TG+ RLA  +LQ V+  +  R   ++ +   L    +   +      +  LG+ +   W   + + P C
Sbjct:  730 ELGGAVLGLAVRVDGRRPIGARARRIPEPELWLAVGPRQDEMTVKIVCRCLADLRDYCQPHAPGALLKAAFICAGIVHVHSELQLSEQLLRTFGGGFELHTWSELPHGSGLGTSSILAGTALAALQRAAGRVVGTEALIHAVLHLEQVLTTGGGWQDQVGGLMPGIKVGRSRAQLPLKVEVEEVTVPEGFVQKLNDHLLLVYTGKTRLARNLLQDVLRSWYARLPAVVQNAHSLVRQTEECAEGFRQGSLPLLGQCLTSYWEQKKLMAPGC 1000
The following BLAST results are available for this feature:
BLAST of CF833605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FUK_HUMAN2.133e-1925.46L-fucose kinase OS=Homo sapiens GN=FUK PE=2 SV=2[more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_03O14_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa03O14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833605 ID=CF833605; Name=CF833605; organism=Citrus sinensis; type=EST; length=802bp
TCCTCCTGGAGTTTGGAGCGTGCTGGTTGTGTTCTCAATGTGGCAATACC
TTTGGAAAGTTCTCTTCCGATTGGCACCATCATAGAGACAACAAAAATGA
GTGGCGTATTGATTAGTGATGATGCTGGAAACCAGTTACATATTGAAGAC
CTCACCCCCATTGCTACTCCCTTCGACCATAATGATCCATTTCGGCTCGT
CAAATCTGCATTGCTAGTAACTGGCGTTATTCATGAAAAACTTATTGAAT
CCATGGGCTTGCAGATCAGGACGTGGGCAAATGTCCCCCGTGGTAGTGGC
TTAGGAACTTCTAGCATCTTAGCAGCTGCTGTTGTAAAAGCTCTTCTGCA
GATAACCGATGGAGATCAAAGTAATGAAAATGTTGCGCGGCTTGTTTTGT
TGTTAGAGCAGCTCATGGGCACAGGTGGTGGCTGGCAAGATCAAATTGGA
GGTTTGTACCCAGGCATTAAGTTCACTTCAAGTTTCCCTGGAATACCATT
GCGGCTCCAGGTGATCCCCCTACTGGCTTCTCCTCAGCTGATTCTGGAGT
TGCAGCAAAGATTGCTTGTGGTATTTACTGGTCAAGTTCGACTTGCACAT
CAAGTGCTACAAAAGGTGGTGACTCGGTATCTTCAAAGGGATAACCTTCT
TATATCAAGTATCAAGCGTCTGACTGAATTGGCAAAGAATGGGAGGGACG
CCTTAATGAACTGTGATGTAGATGAACTGGGAAAGATAATGCTGGAGGCT
TGGAGATTGCATCAGGAACTTGACCCCCATTGCAGCAACGAATTTGTTGA
CA
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