CF833607

Overview
NameCF833607
Unique NameCF833607
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length576
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833607 vs. ExPASy Swiss-Prot
Match: PME_ACTDE (Pectinesterase OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 3.219e-54
Identity = 98/133 (73.68%), Postives = 108/133 (81.20%), Query Frame = -1
Query:  178 QGREDPNQNTGISILNCKVAAASDLIPYQTEFKTYLGRPWKEYSRTVFMLSYLGDLIAPAGWLEWNGTFALSTLFYGEYKNRGPGSNTRARVTWPGYRVINNSAVAAQFTAGPFLQGSEWLNSTGIPFYLNLT 576
            QGR+DPNQNTGISILNCKVAAA+DLIP  + FKTYLGRPWKEYSRTVF+LS +  LI PAGWLEW+G FAL+TL+Y EYKN GPGSNT ARVTWPGY V  N     QFT G F+QGS+WL S  IP YLNLT
Sbjct:  189 QGRDDPNQNTGISILNCKVAAAADLIPVLSSFKTYLGRPWKEYSRTVFLLSQMESLIDPAGWLEWSGDFALTTLYYREYKNTGPGSNTTARVTWPGYAVTTNETEVIQFTVGNFIQGSQWLTSYNIPVYLNLT 321          
BLAST of CF833607 vs. ExPASy Swiss-Prot
Match: PME1_FICAW (Pectinesterase/pectinesterase inhibitor OS=Ficus awkeotsang PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 6.086e-45
Identity = 82/132 (62.12%), Postives = 96/132 (72.73%), Query Frame = -1
Query:  181 QGREDPNQNTGISILNCKVAAASDLIPYQTEFKTYLGRPWKEYSRTVFMLSYLGDLIAPAGWLEWNGTFALSTLFYGEYKNRGPGSNTRARVTWPGYRVINNSAVAAQFTAGPFLQGSEWLNSTGIPFYLNL 576
            QGR DPNQNTG SI NC++ A++DL P +  FK+YLGRPWKEYSRTV M SY+ D+I PAGWLEW+  FAL TLFYGEY+N GPGS T  RV WPGY VI +  VA QFT    +QG  WL STG+ +   L
Sbjct:  412 QGRTDPNQNTGTSIQNCEIFASADLEPVEDTFKSYLGRPWKEYSRTVVMESYISDVIDPAGWLEWDRDFALKTLFYGEYRNGGPGSGTSERVKWPGYHVITSPEVAEQFTVAELIQGGSWLGSTGVDYTAGL 543          
BLAST of CF833607 vs. ExPASy Swiss-Prot
Match: PME39_ARATH (Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana GN=PME39 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.313e-44
Identity = 82/130 (63.08%), Postives = 95/130 (73.08%), Query Frame = -1
Query:  187 QGREDPNQNTGISILNCKVAAASDLIPYQTEFKTYLGRPWKEYSRTVFMLSYLGDLIAPAGWLEWNGTFALSTLFYGEYKNRGPGSNTRARVTWPGYRVINNSAVAAQFTAGPFLQGSEWLNSTGIPFYL 576
            Q R   +Q TGISILNC++ AA DLIP +  FK YLGRPW++YSRTV + S++ DLI PAGWLE    FAL TL+YGEY N GPG+N   RVTWPG+R I N   A QFT GPF+ GS WLNSTGIPF L
Sbjct:  401 QSRNQSDQPTGISILNCRILAAPDLIPVKENFKAYLGRPWRKYSRTVIIKSFIDDLIHPAGWLEGKKDFALETLYYGEYMNEGPGANMAKRVTWPGFRRIENQTEATQFTVGPFIDGSTWLNSTGIPFSL 530          
BLAST of CF833607 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 5.696e-43
Identity = 81/132 (61.36%), Postives = 92/132 (69.70%), Query Frame = -1
Query:  181 QGREDPNQNTGISILNCKVAAASDLIPYQTEFKTYLGRPWKEYSRTVFMLSYLGDLIAPAGWLEWNGTFALSTLFYGEYKNRGPGSNTRARVTWPGYRVINNSAVAAQFTAGPFLQGSEWLNSTGIPFYLNL 576
            QGR DPNQNTGI I  C++ A SDL P Q  F TYLGRPWKEYSRTV M S + D+I PAGW EWNG FAL TLFYGEY N G G+ T  RV W G++VI +S  A  +T G F+ G  WL+STG PF L L
Sbjct:  452 QGRTDPNQNTGIVIQKCRIGATSDLRPVQKSFPTYLGRPWKEYSRTVIMQSSITDVIQPAGWHEWNGNFALDTLFYGEYANTGAGAPTSGRVKWKGHKVITSSTEAQAYTPGRFIAGGSWLSSTGFPFSLGL 583          
BLAST of CF833607 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.827e-42
Identity = 81/132 (61.36%), Postives = 93/132 (70.45%), Query Frame = -1
Query:  181 QGREDPNQNTGISILNCKVAAASDLIPYQTEFKTYLGRPWKEYSRTVFMLSYLGDLIAPAGWLEWNGTFALSTLFYGEYKNRGPGSNTRARVTWPGYRVINNSAVAAQFTAGPFLQGSEWLNSTGIPFYLNL 576
            QGR DPNQNTGI I   ++ A SDL P Q  F TYLGRPWKEYSRTV M S + DLI PAGW EW+G FAL+TLFYGE++N G G+ T  RV W G+RVI ++  A  FT G F+ GS WL STG PF L L
Sbjct:  453 QGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 584          
BLAST of CF833607 vs. ExPASy Swiss-Prot
Match: PME40_ARATH (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=PME40 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 3.692e-42
Identity = 77/132 (58.33%), Postives = 97/132 (73.48%), Query Frame = -1
Query:  181 QGREDPNQNTGISILNCKVAAASDLIPYQTEFKTYLGRPWKEYSRTVFMLSYLGDLIAPAGWLEWNGTFALSTLFYGEYKNRGPGSNTRARVTWPGYRVINNSAVAAQFTAGPFLQGSEWLNSTGIPFYLNL 576
            QGRE+  + TGISI++ ++ AA DLIP Q  FK YLGRPW+ YSRTV M S++ DL+ PAGWL+W   FAL TL+YGEY N GPGSN   RV WPG++ I     A+QF+ GPF+ G++WLNST IPF L+L
Sbjct:  387 QGRENSREPTGISIISSRILAAPDLIPVQANFKAYLGRPWQLYSRTVIMKSFIDDLVDPAGWLKWKDDFALETLYYGEYMNEGPGSNMTNRVQWPGFKRIETVEEASQFSVGPFIDGNKWLNSTRIPFTLDL 518          
BLAST of CF833607 vs. ExPASy Swiss-Prot
Match: PME2_CITSI (Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 4.822e-42
Identity = 75/128 (58.59%), Postives = 97/128 (75.78%), Query Frame = -1
Query:  193 QGREDPNQNTGISILNCKVAAASDLIPYQTEFKTYLGRPWKEYSRTVFMLSYLGDLIAPAGWLEWNGTFALSTLFYGEYKNRGPGSNTRARVTWPGYRVINNSAVAAQFTAGPFLQGSEWLNSTGIPF 576
            QGR DPNQ+TGI I NC+V AASDL P Q+  KT+LGRPWK+YSRTV++ ++L  LI PAGW+EW+G FAL+TL+Y EY N GPGS+T  RV W GY V+ + +  +QFT G F+ G+ WL +T +PF
Sbjct:  379 QGRTDPNQSTGIIIHNCRVTAASDLKPVQSSVKTFLGRPWKQYSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPF 506          
BLAST of CF833607 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 6.298e-42
Identity = 80/132 (60.61%), Postives = 93/132 (70.45%), Query Frame = -1
Query:  181 QGREDPNQNTGISILNCKVAAASDLIPYQTEFKTYLGRPWKEYSRTVFMLSYLGDLIAPAGWLEWNGTFALSTLFYGEYKNRGPGSNTRARVTWPGYRVINNSAVAAQFTAGPFLQGSEWLNSTGIPFYLNL 576
            QGR DPNQNTGI I   ++ A SDL P Q  F TYLGRPWKEYSRTV M S + D+I PAGW EW+G FAL+TLFYGE++N G G+ T  RV W G+RVI ++  A  FT G F+ GS WL STG PF L L
Sbjct:  453 QGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 584          
BLAST of CF833607 vs. ExPASy Swiss-Prot
Match: PME1_SOLLC (Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9 PE=1 SV=5)

HSP 1 Score: 170.244 bits (430), Expect = 6.298e-42
Identity = 79/128 (61.72%), Postives = 89/128 (69.53%), Query Frame = -1
Query:  193 QGREDPNQNTGISILNCKVAAASDLIPYQTEFKTYLGRPWKEYSRTVFMLSYLGDLIAPAGWLEWNGTFALSTLFYGEYKNRGPGSNTRARVTWPGYRVINNSAVAAQFTAGPFLQGSEWLNSTGIPF 576
            QGR DPNQ TG SI  C + A+SDL P   EF TYLGRPWKEYSRTV M SYLG LI PAGW EW+G FAL TL+YGE+ N GPG+ T  RV WPGY VI + A A  FT    +QG  WL STG+ +
Sbjct:  413 QGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWKEYSRTVVMESYLGGLINPAGWAEWDGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPAKAMPFTVAKLIQGGSWLRSTGVAY 540          
BLAST of CF833607 vs. ExPASy Swiss-Prot
Match: PME22_SOLLC (Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2.2 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 6.963e-41
Identity = 77/128 (60.16%), Postives = 88/128 (68.75%), Query Frame = -1
Query:  193 QGREDPNQNTGISILNCKVAAASDLIPYQTEFKTYLGRPWKEYSRTVFMLSYLGDLIAPAGWLEWNGTFALSTLFYGEYKNRGPGSNTRARVTWPGYRVINNSAVAAQFTAGPFLQGSEWLNSTGIPF 576
            QGR DPNQ TG SI  C + A+SDL P   EF TYLGRPWK+YSRTV M SYLG LI PAGW EW+G FAL TL+YGE+ N GPG+ T  RV WPGY  I + A A  FT    +QG  WL STG+ +
Sbjct:  417 QGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWKKYSRTVVMESYLGGLINPAGWAEWDGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHCITDPAEAMPFTVAKLIQGGSWLRSTGVAY 544          
The following BLAST results are available for this feature:
BLAST of CF833607 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
PME_ACTDE3.219e-5473.68Pectinesterase OS=Actinidia deliciosa PE=1 SV=1[more]
PME1_FICAW6.086e-4562.12Pectinesterase/pectinesterase inhibitor OS=Ficus a... [more]
PME39_ARATH2.313e-4463.08Probable pectinesterase/pectinesterase inhibitor 3... [more]
PMEU1_SOLLC5.696e-4361.36Pectinesterase/pectinesterase inhibitor U1 OS=Sola... [more]
PME1_CITSI2.827e-4261.36Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE... [more]
PME40_ARATH3.692e-4258.33Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME2_CITSI4.822e-4258.59Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE... [more]
PME3_CITSI6.298e-4260.61Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1[more]
PME1_SOLLC6.298e-4261.72Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9... [more]
PME22_SOLLC6.963e-4160.16Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_03O15_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa03O15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833607 ID=CF833607; Name=CF833607; organism=Citrus sinensis; type=EST; length=576bp
ATAAATATAGATTTTATTACCATTCTCCCAATTCACAAGTAAACACACCA
TTATTCTATTAGATAAGTAATAATAAATTTTCTAAAGGGATAATTGTAAT
TCATTCCATTCCAATGCTAGTGCTCGAGCCTTCAGCACTACGGCAGACAA
TAGGCACTAAAAAGTTCACCCTCAAGGAGTCAAATTGAGATAGAAAGGAA
TGCCAGTAGAATTTAGCCATTCACTTCCTTGCAAGAATGGCCCGGCCGTA
AATTGAGCTGCCACAGCCGAGTTATTGATCACCCTGTAACCAGGCCACGT
CACTCTGGCACGCGTGTTAGAACCAGGGCCCCTGTTCTTGTACTCCCCAT
AAAAGAGTGTACTCAATGCAAATGTACCATTCCATTCTAACCATCCAGCC
GGCGCTATCAAATCGCCCAAATAAGATAGCATAAAAACCGTCCTCGAATA
TTCTTTCCAAGGACGACCAAGGTATGTTTTAAACTCTGTTTGATATGGAA
TCAAGTCCGAAGCAGCAGCAACTTTGCAATTCAAGATTGATATCCCTGTA
TTTTGATTAGGGTCTTCTCTCCCCTG
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