CF833608

Overview
NameCF833608
Unique NameCF833608
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length716
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833608 vs. ExPASy Swiss-Prot
Match: PME40_ARATH (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=PME40 PE=2 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 3.133e-77
Identity = 149/251 (59.36%), Postives = 182/251 (72.51%), Query Frame = 1
Query:    4 KLCLIGAMTNQYTCLDGFAYSDGN------------VRDVIKSSLYNISRHVSNSLVMLKKIPGDNMSSKYEVFPEYGRIKR--GFPTWLSLNDRKLLQKSVNLTKFDLIVAKDGSGNFTTITEAVEAAPNKSNTRFVIYIKAGAYFENVEVDKKKTMLMFVGDGIGKTVVKANRSVVDGWTTFRSATVAVVGTGFIAKGITVENSAGPSKHQAVALRSGSDLSAFYKCSFVGYQDTLYVHSLKQFYRECD 714
            K+ L  AMTN  TCLDGFA SD +            V + +K SL+NIS HVS+SL ML+ IPG          P  G++K   GFP W+S +DR LLQ  V+ TK +L+VA++G+GN+TTI EA+ AAPN S TRFVIYIK G YFEN+E+ ++KTM+MF+GDGIG+TV+KANRS  DGWT F SATV V G+GFIAK ++  N AGP KHQAVALRS SDLSA+Y+CSF  YQDT+YVHS KQFYRECD
Sbjct:  110 KMLLSAAMTNTRTCLDGFASSDNDENLNNNDNKTYGVAESLKESLFNISSHVSDSLAMLENIPGH--------IP--GKVKEDVGFPMWVSGSDRNLLQDPVDETKVNLVVAQNGTGNYTTIGEAISAAPNSSETRFVIYIKCGEYFENIEIPREKTMIMFIGDGIGRTVIKANRSYADGWTAFHSATVGVRGSGFIAKDLSFVNYAGPEKHQAVALRSSSDLSAYYRCSFESYQDTIYVHSHKQFYRECD 350          
BLAST of CF833608 vs. ExPASy Swiss-Prot
Match: PME39_ARATH (Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana GN=PME39 PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 4.382e-71
Identity = 141/244 (57.79%), Postives = 176/244 (72.13%), Query Frame = 1
Query:    7 LCLIGAMTNQYTCLDGFAYSDG-NVRDV-------IKSSLYNISRHVSNSLVMLKKIPGDNMSSKYEVFPEYGRIKRGFPTWLSLNDRKLLQKSVNLTKFDLIVAKDGSGNFTTITEAVEAAPNKSNTRFVIYIKAGAYFENVEVDKKKTMLMFVGDGIGKTVVKANRSVVDGWTTFRSATVAVVGTGFIAKGITVENSAGPSKHQAVALRSGSDLSAFYKCSFVGYQDTLYVHSLKQFYRECD 714
            + L   MT Q TCLDGF+ SD  N  D+       +K  + +IS ++SNSL ML+ I      S+ +  P+   +   +P+WLS ND++LL+  V  T ++L VA DG+GNFTTI +AV AAPN S TRF+IYIK G YFENVE+ KKKTM+MF+GDGIGKTV+KANRS +DGW+TF++ TV V G G+IAK I+  NSAGP+K QAVA RSGSD SAFY+C F GYQDTLYVHS KQFYRECD
Sbjct:  127 MLLTNVMTYQDTCLDGFSTSDNENNNDMTYELPENLKEIILDISNNLSNSLHMLQVI------SRKKPSPKSSEVDVEYPSWLSENDQRLLEAPVQETNYNLSVAIDGTGNFTTINDAVFAAPNMSETRFIIYIKGGEYFENVELPKKKTMIMFIGDGIGKTVIKANRSRIDGWSTFQTPTVGVKGKGYIAKDISFVNSAGPAKAQAVAFRSGSDHSAFYRCEFDGYQDTLYVHSAKQFYRECD 364          
BLAST of CF833608 vs. ExPASy Swiss-Prot
Match: PME_ACTDE (Pectinesterase OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.847e-62
Identity = 115/144 (79.86%), Postives = 128/144 (88.89%), Query Frame = 1
Query:  283 DLIVAKDGSGNFTTITEAVEAAPNKSNTRFVIYIKAGAYFENVEVDKKKTMLMFVGDGIGKTVVKANRSVVDGWTTFRSATVAVVGTGFIAKGITVENSAGPSKHQAVALRSGSDLSAFYKCSFVGYQDTLYVHSLKQFYRECD 714
            D++VAKDGSGNFTT+  AV AA + S  RFVIYIK GAYFE V+VDKKKT LMF+GDGIGKT +K NRSVVDGWTTFRS+TVAVVGTGFIA+GI+ EN AGPSKHQAVALRSG+D SAFY+CSFVGYQDTLYVHSL+QFY ECD
Sbjct:    9 DVVVAKDGSGNFTTVGAAVAAAKDSSTARFVIYIKEGAYFEYVDVDKKKTNLMFIGDGIGKTWIKGNRSVVDGWTTFRSSTVAVVGTGFIARGISFENYAGPSKHQAVALRSGADFSAFYQCSFVGYQDTLYVHSLRQFYSECD 152          
BLAST of CF833608 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2)

HSP 1 Score: 238.424 bits (607), Expect = 2.847e-62
Identity = 131/253 (51.78%), Postives = 165/253 (65.22%), Query Frame = 1
Query:    4 KLCLIGAMTNQYTCLDGFAYSDGN--VRDVIKSSLYNISRHVSNSLVMLKKIPGDNMSS-----KYEVFPEYGRIKR----------GFPTWLSLNDRKLLQKSVNLTKFDLIVAKDGSGNFTTITEAVEAAPNKSNTRFVIYIKAGAYFENVEVDKKKTMLMFVGDGIGKTVVKANRSVVDGWTTFRSATVAVVGTGFIAKGITVENSAGPSKHQAVALRSGSDLSAFYKCSFVGYQDTLYVHSLKQFYREC 711
            K  +  A+TNQ TCLDGF+Y D +  VR  +     ++    SN+L M+K +   ++++     K   F      K           G+P WLS+ DR+LLQ S    K D  VA DGSG+FTT+  AV AAP KSN RFVI+IKAG Y ENVEV KKKT +MF+GDG GKT++  +R+VVDG TTF SATVA VG  F+A+ IT +N+AGPSKHQAVALR GSD SAFY+C    YQDTLYVHS +QF+ +C
Sbjct:  168 KTLISSAITNQGTCLDGFSYDDADRKVRKALLKGQVHVEHMCSNALAMIKNMTETDIANFELRDKSSTFTNNNNRKLKEVTGDLDSDGWPKWLSVGDRRLLQGST--IKADATVADDGSGDFTTVAAAVAAAPEKSNKRFVIHIKAGVYRENVEVTKKKTNIMFLGDGRGKTIITGSRNVVDGSTTFHSATVAAVGERFLARDITFQNTAGPSKHQAVALRVGSDFSAFYQCDMFAYQDTLYVHSNRQFFVKC 418          
BLAST of CF833608 vs. ExPASy Swiss-Prot
Match: PME32_ARATH (Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana GN=PME32 PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 4.856e-62
Identity = 121/239 (50.63%), Postives = 159/239 (66.53%), Query Frame = 1
Query:   22 AMTNQYTCLDGFAYSDGNVRDVIKSSLYNISRHVSNSLVML---------KKIPGDNMSSKYEVFPEYGRIKRGFPTWLSLNDRKLLQKSVNLTKFDLIVAKDGSGNFTTITEAVEAAPNKSNTRFVIYIKAGAYFENVEVDKKKTMLMFVGDGIGKTVVKANRSVVDGWTTFRSATVAVVGTGFIAKGITVENSAGPSKHQAVALRSGSDLSAFYKCSFVGYQDTLYVHSLKQFYREC 711
            A++NQ TCLDGF  ++G ++ ++   L  +   V N L M+         K I    M+  +  F +       FP+W+   DRKLLQ   N+T  D +VA DG+GNFTTI++AV AAP+ S  R+VI++K G Y ENVE+ KKK  +M VGDGI  TV+  NRS +DGWTTFRSAT AV G GFIA+ IT +N+AGP KHQAVA+RS +DL  FY+C+  GYQDTLY HS++QF+REC
Sbjct:  126 ALSNQDTCLDGFEGTNGIIKKIVAGGLSKVGTTVRNLLTMVHSPPSKPKPKPIKAQTMTKAHSGFSK-------FPSWVKPGDRKLLQTD-NITVADAVVAADGTGNFTTISDAVLAAPDYSTKRYVIHVKRGVYVENVEIKKKKWNIMMVGDGIDATVITGNRSFIDGWTTFRSATFAVSGRGFIARDITFQNTAGPEKHQAVAIRSDTDLGVFYRCAMRGYQDTLYAHSMRQFFREC 356          
BLAST of CF833608 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 5.369e-61
Identity = 124/243 (51.03%), Postives = 166/243 (68.31%), Query Frame = 1
Query:    4 KLCLIGAMTNQYTCLDGFAYSDGN--VRDVIKSSLYNISRHVSNSLVMLKKIPGDNM-----SSKYEVFPEYGRIKRGFPTWLSLNDRKLLQKSVNLTKFDLIVAKDGSGNFTTITEAVEAAPNKSNTRFVIYIKAGAYFENVEVDKKKTMLMFVGDGIGKTVVKANRSVVDGWTTFRSATVAVVGTGFIAKGITVENSAGPSKHQAVALRSGSDLSAFYKCSFVGYQDTLYVHSLKQFYREC 711
            K  +  AMTNQ TCLDGF++ D N  VRD +     ++ +  SN+L M+K +   +M     S+  ++  E   +  G+P WLS  DR+LLQ S ++T  +++VA DGSGNF T+  +V AAP     R++I IKAG Y ENVEV KK   +MF+GDG  +T++  +R+VVDG TTF+SATVAVVG GF+A+ IT +N+AGPSKHQAVALR G+DLSAFY C  + YQDTLYVHS +QF+  C
Sbjct:  176 KTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLIEETSTVD-GWPAWLSTGDRRLLQSS-SVTP-NVVVAADGSGNFKTVAASVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNC 415          
BLAST of CF833608 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.040e-60
Identity = 124/242 (51.24%), Postives = 161/242 (66.53%), Query Frame = 1
Query:    4 KLCLIGAMTNQYTCLDGFAYSDGN--VRDVIKSSLYNISRHVSNSLVMLKKIPGDNM----SSKYEVFPEYGRIKRGFPTWLSLNDRKLLQKSVNLTKFDLIVAKDGSGNFTTITEAVEAAPNKSNTRFVIYIKAGAYFENVEVDKKKTMLMFVGDGIGKTVVKANRSVVDGWTTFRSATVAVVGTGFIAKGITVENSAGPSKHQAVALRSGSDLSAFYKCSFVGYQDTLYVHSLKQFYREC 711
            K  +  AMTNQ TCLDGF++ D N  VRD +     ++ +  SN+L M+K +   +M    +S      E      G+P WLS  DR+LLQ S ++T  + +VA DGSGNF T+  AV AAP     R++I IKAG Y ENVEV KK   +MF+GDG  +T++  +R+VVDG TTF+SAT AVVG GF+A+ IT +N+AGPSKHQAVALR G+DLSAFY C  + YQDTLYVHS +QF+  C
Sbjct:  176 KTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSS-SVTP-NAVVAADGSGNFKTVAAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATAAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNC 415          
BLAST of CF833608 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2)

HSP 1 Score: 224.557 bits (571), Expect = 4.254e-58
Identity = 125/261 (47.89%), Postives = 160/261 (61.30%), Query Frame = 1
Query:    4 KLCLIGAMTNQYTCLDGFAYSDGN--VRDVIKSSLYNISRHVSNSLVMLKKIPGD---NMSSKYEVFPEYGRIKR--------------------GFPTWLSLNDRKLLQKSVNLTKFDLIVAKDGSGNFTTITEAVEAAPNKSNTRFVIYIKAGAYFENVEVDKKKTMLMFVGDGIGKTVVKANRSVVDGWTTFRSATVAVVGTGFIAKGITVENSAGPSKHQAVALRSGSDLSAFYKCSFVGYQDTLYVHSLKQFYREC 711
            K  +  A+TNQ TCLDGF++ D +  VR  +     ++    SN+L M+K +      N   K ++     ++K                     G+PTWLS  DR+LLQ S    K D  VA DGSG F T+  AV AAP  SN R+VI+IKAG Y ENVEV KKK  +MF+GDG  +T++  +R+VVDG TTF SATVA VG  F+A+ IT +N+AGPSKHQAVALR GSD SAFY C  + YQDTLYVHS +QF+ +C
Sbjct:  165 KTLISSAITNQETCLDGFSHDDADKQVRKALLKGQIHVEHMCSNALAMIKNMTDTDIANFEQKAKITSNNRKLKEENQETTVAVDIAGAGELDSEGWPTWLSAGDRRLLQGSG--VKADATVAADGSGTFKTVAAAVAAAPENSNKRYVIHIKAGVYRENVEVAKKKKNIMFMGDGRTRTIITGSRNVVDGSTTFHSATVAAVGERFLARDITFQNTAGPSKHQAVALRVGSDFSAFYNCDMLAYQDTLYVHSNRQFFVKC 423          
BLAST of CF833608 vs. ExPASy Swiss-Prot
Match: PME_PRUPE (Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 5.556e-58
Identity = 120/233 (51.50%), Postives = 153/233 (65.67%), Query Frame = 1
Query:   13 LIGAMTNQYTCLDGFAYSDGNVRDVIKSSLYNISRHVSNSLVMLKKIPGDNMSSKYEVFPEYGRIKRGFPTWLSLNDRKLLQKSVNLTKFDLIVAKDGSGNFTTITEAVEAAPNKSNTRFVIYIKAGAYFENVEVDKKKTMLMFVGDGIGKTVVKANRSVVDGWTTFRSATVAVVGTGFIAKGITVENSAGPSKHQAVALRSGSDLSAFYKCSFVGYQDTLYVHSLKQFYREC 711
            L  A+ NQ TC +GF  ++  V+ +I + L  ++  V   L  +   P  N           G+I    P+W+   DRKLLQ   +    D IVA+DG+GNFT +T+AV AAP+ S  R+VIYIK G Y ENVE+ KKK  LM +GDG+  T++  NRS VDGWTTFRSAT AV G GFIA+ IT EN+AGP KHQAVALRS SDLS FY+C+  GYQDTLY H+++QFYR+C
Sbjct:  132 LSAALVNQDTCSNGFEGTNSIVQGLISAGLGQVTSLVQELLTQVH--PNSNQQGPN------GQI----PSWVKTKDRKLLQ--ADGVSVDAIVAQDGTGNFTNVTDAVLAAPDYSMRRYVIYIKRGTYKENVEIKKKKWNLMMIGDGMDATIISGNRSFVDGWTTFRSATFAVSGRGFIARDITFENTAGPEKHQAVALRSDSDLSVFYRCNIRGYQDTLYTHTMRQFYRDC 350          
BLAST of CF833608 vs. ExPASy Swiss-Prot
Match: PME44_ARATH (Probable pectinesterase/pectinesterase inhibitor 44 OS=Arabidopsis thaliana GN=PME44 PE=2 SV=2)

HSP 1 Score: 221.09 bits (562), Expect = 4.703e-57
Identity = 116/246 (47.15%), Postives = 158/246 (64.23%), Query Frame = 1
Query:   13 LIGAMTNQYTCLDGFAYSDGNVRDVIKSSLYNISRHVSNSLVMLKKIPGDNMSSKYEVFPEYGRIKRG-------------FPTWLSLNDRKLLQKSVNLTKFDLIVAKDGSGNFTTITEAVEAAPNKSNTRFVIYIKAGAYFENVEVDKKKTMLMFVGDGIGKTVVKANRSVVDGWTTFRSATVAVVGTGFIAKGITVENSAGPSKHQAVALRSGSDLSAFYKCSFVGYQDTLYVHSLKQFYREC 711
            L  A++NQ TC++GF  + G V+ ++  SL  +   +   L +++        SK     +  +   G             FP W+  +DRKLL+   N   +D+ VA DG+GNFT I +A++ AP+ S+TRFVIYIK G Y ENVE+ KKK  ++ +GDGI  TV+  NRS +DGWTTFRSAT AV G GF+A+ IT +N+AGP KHQAVALRS SDLS F++C+  GYQDTLY H+++QFYREC
Sbjct:  111 LSAALSNQATCMEGFDGTSGLVKSLVAGSLDQLYSMLRELLPLVQPEQKPKAVSKPGPIAKGPKAPPGRKLRDTDEDESLQFPDWVRPDDRKLLES--NGRTYDVSVALDGTGNFTKIMDAIKKAPDYSSTRFVIYIKKGLYLENVEIKKKKWNIVMLGDGIDVTVISGNRSFIDGWTTFRSATFAVSGRGFLARDITFQNTAGPEKHQAVALRSDSDLSVFFRCAMRGYQDTLYTHTMRQFYREC 354          
The following BLAST results are available for this feature:
BLAST of CF833608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
PME40_ARATH3.133e-7759.36Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME39_ARATH4.382e-7157.79Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME_ACTDE2.847e-6279.86Pectinesterase OS=Actinidia deliciosa PE=1 SV=1[more]
PME2_ARATH2.847e-6251.78Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 P... [more]
PME32_ARATH4.856e-6250.63Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME3_CITSI5.369e-6151.03Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1[more]
PME1_CITSI2.040e-6051.24Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE... [more]
PME3_ARATH4.254e-5847.89Pectinesterase/pectinesterase inhibitor 3 OS=Arabi... [more]
PME_PRUPE5.556e-5851.50Pectinesterase/pectinesterase inhibitor PPE8B OS=P... [more]
PME44_ARATH4.703e-5747.15Probable pectinesterase/pectinesterase inhibitor 4... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_03O15_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa03O15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833608 ID=CF833608; Name=CF833608; organism=Citrus sinensis; type=EST; length=716bp
TGCAAACTTTGTCTCATTGGTGCAATGACAAACCAGTACACGTGTCTTGA
TGGGTTCGCTTACAGTGACGGAAACGTGAGGGACGTTATTAAGAGCAGCT
TGTACAACATTTCCAGGCACGTGAGCAACTCTTTGGTTATGCTCAAGAAA
ATCCCCGGTGATAACATGTCTTCCAAGTACGAGGTTTTTCCTGAGTATGG
GCGTATTAAGAGAGGATTCCCAACTTGGTTGTCTTTAAATGATCGCAAAT
TGTTACAGAAGTCCGTTAATTTGACCAAATTTGATCTGATAGTGGCTAAA
GATGGCTCTGGGAATTTCACTACCATTACTGAAGCAGTGGAAGCAGCTCC
AAACAAATCCAATACTCGGTTTGTGATTTACATAAAAGCTGGGGCTTATT
TTGAGAACGTGGAGGTGGATAAAAAGAAGACAATGTTGATGTTCGTAGGA
GATGGGATCGGCAAAACAGTAGTGAAGGCCAATAGAAGCGTCGTTGATGG
ATGGACTACTTTCCGGTCAGCCACTGTAGCTGTCGTGGGGACCGGGTTTA
TCGCCAAAGGCATTACAGTTGAGAACTCAGCTGGTCCAAGCAAACACCAA
GCAGTAGCCTTAAGGAGTGGCTCAGATCTCTCAGCTTTCTACAAATGCAG
CTTCGTTGGGTACCAAGACACTCTATATGTTCATTCCCTCAAACAATTTT
ATCGTGAATGCGACGT
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