CF833635

Overview
NameCF833635
Unique NameCF833635
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length837
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833635 vs. ExPASy Swiss-Prot
Match: ADCK4_RAT (Uncharacterized aarF domain-containing protein kinase 4 OS=Rattus norvegicus GN=Adck4 PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 5.568e-58
Identity = 110/220 (50.00%), Postives = 146/220 (66.36%), Query Frame = -3
Query:  173 VLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELFVFRFMQTDPNWSNFLYDEATKTINLIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRLGFLTGMENVIMLDAHVQAAFIVGMPFAKPGGYDFCANNITQSISNLGATMLRHRLTPPPDEAYSLHRKLSGAFLACIKIGAVVPCRELLLDVYEHY 832
            +L++   F VP VV++  + RVL  EL  GIP+D+   LSQ+ RN +  +LL L L ELF FRFMQTDPNW+NFLYD ++  + L+DFGA+RA+   F D Y+ +V A A+GDR+  ++ S+ L FLTG E     DAHV+A  I+G PFA  G YDF A    + I  L   +LRHRL PPP+E Y+LHRKL+GAFLAC ++ A + CR+L  D Y  Y
Sbjct:  296 LLADDPFFRVPAVVEELCTTRVLGMELAGGIPLDQCQGLSQDIRNQICFQLLRLCLRELFEFRFMQTDPNWANFLYDASSHKVTLLDFGASRAFGTEFTDHYIEVVKAAADGDRDRVLQKSQDLKFLTGFETKAFSDAHVEAVMILGEPFAASGSYDFGAGETARRIQGLIPVLLRHRLRPPPEETYALHRKLAGAFLACARLHAHIACRDLFQDTYHRY 515          
BLAST of CF833635 vs. ExPASy Swiss-Prot
Match: ADCK4_MOUSE (Uncharacterized aarF domain-containing protein kinase 4 OS=Mus musculus GN=Adck4 PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.620e-57
Identity = 110/220 (50.00%), Postives = 145/220 (65.91%), Query Frame = -3
Query:  173 VLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELFVFRFMQTDPNWSNFLYDEATKTINLIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRLGFLTGMENVIMLDAHVQAAFIVGMPFAKPGGYDFCANNITQSISNLGATMLRHRLTPPPDEAYSLHRKLSGAFLACIKIGAVVPCRELLLDVYEHY 832
            +L++   F VP VV +  + RVL  EL  GIP+D+   LSQ+ RN +  +LL L L ELF FRFMQTDPNW+NFLYD ++  + L+DFGA+RA+   F D Y+ +V A A+GDR+  ++ S+ L FLTG E     DAHV+A  I+G PFA  G YDF A    + I  L   +LRHRL PPP+E Y+LHRKL+GAFLAC ++ A + CR+L  D Y  Y
Sbjct:  301 LLADDPFFRVPAVVQELCTTRVLGMELAGGIPLDQCQGLSQDIRNQICFQLLRLCLRELFEFRFMQTDPNWANFLYDASSHQVTLLDFGASRAFGTEFTDHYIEVVKAAADGDRDRVLQKSQDLKFLTGFETKAFSDAHVEAVMILGEPFAASGPYDFGAGETARRIQGLIPVLLRHRLRPPPEETYALHRKLAGAFLACARLHAHIACRDLFQDTYHRY 520          
BLAST of CF833635 vs. ExPASy Swiss-Prot
Match: ADCK4_HUMAN (Uncharacterized aarF domain-containing protein kinase 4 OS=Homo sapiens GN=ADCK4 PE=1 SV=2)

HSP 1 Score: 222.631 bits (566), Expect = 2.116e-57
Identity = 110/227 (48.46%), Postives = 146/227 (64.32%), Query Frame = -3
Query:  152 VLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELFVFRFMQTDPNWSNFLYDEATKTINLIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRLGFLTGMENVIMLDAHVQAAFIVGMPFAKPGGYDFCANNITQSISNLGATMLRHRLTPPPDEAYSLHRKLSGAFLACIKIGAVVPCRELLLDVYEHYQFGEESD 832
            +L+N   F VP VV +  + RVL  EL  G+P+D+   LSQ+ RN +  +LL L L ELF FRFMQTDPNW+NFLYD ++  + L+DFGA+R +   F D Y+ +V A A+GDR+  ++ SR L FLTG E     DAHV+A  I+G PFA  G YDF +    + I +L   +LRHRL PPP+E Y+LHRKL+GAFLAC  + A + CR+L  D Y  Y    + D
Sbjct:  300 LLANDPFFRVPAVVKELCTTRVLGMELAGGVPLDQCQGLSQDLRNQICFQLLTLCLRELFEFRFMQTDPNWANFLYDASSHQVTLLDFGASREFGTEFTDHYIEVVKAAADGDRDCVLQKSRDLKFLTGFETKAFSDAHVEAVMILGEPFATQGPYDFGSGETARRIQDLIPVLLRHRLCPPPEETYALHRKLAGAFLACAHLRAHIACRDLFQDTYHRYWASRQPD 526          
BLAST of CF833635 vs. ExPASy Swiss-Prot
Match: ADCK3_DANRE (Chaperone activity of bc1 complex-like, mitochondrial OS=Danio rerio GN=cabc1 PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 6.807e-56
Identity = 104/226 (46.02%), Postives = 148/226 (65.49%), Query Frame = -3
Query:  158 DVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELFVFRFMQTDPNWSNFLYDEATKTINLIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRLGFLTGMENVIMLDAHVQAAFIVGMPFAKPGGYDFCANNITQSISNLGATMLRHRLTPPPDEAYSLHRKLSGAFLACIKIGAVVPCRELLLDVYEHYQFGEE 835
            ++L +   FYVP V+ + SS+ VLTTELV G P+D+   L+QE +N + K +L L L ELF FR+MQTDPNWSNF YD  T  + L+DFGA R + +SF D Y+ ++ A A+G+RE  ++ S  + FLTG E+  M++AHV A  I+G  FA    +DF A + T+ I NL   ML+ RL PPP+E YSLHRK+ G+FL C ++ A + C+++    Y +Y  G +
Sbjct:  372 ELLKDHPFFYVPDVISELSSQHVLTTELVPGFPLDQAEALTQELKNEICKNILNLCLRELFEFRYMQTDPNWSNFFYDPQTHRVALLDFGATRGFDESFTDVYIEIIKAAADGNREGVLKQSIDMKFLTGYESKAMVNAHVDAVMILGEAFASEEPFDFGAQSTTERIHNLIPVMLKQRLIPPPEETYSLHRKMGGSFLICSRLNAKISCKDMFEAAYSNYWSGRK 597          
BLAST of CF833635 vs. ExPASy Swiss-Prot
Match: COQ8_CAEEL (Ubiquinone biosynthesis protein coq-8 OS=Caenorhabditis elegans GN=coq-8 PE=2 SV=2)

HSP 1 Score: 217.238 bits (552), Expect = 8.890e-56
Identity = 108/230 (46.96%), Postives = 151/230 (65.65%), Query Frame = -3
Query:  158 DVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELFVFRFMQTDPNWSNFLYDEATKT----INLIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRLGFLTGMENVIMLDAHVQAAFIVGMPFAKPGGYDFCANNITQSISNLGATMLRHRLTPPPDEAYSLHRKLSGAFLACIKIGAVVPCRELLLDVYEHYQFGEE 835
            +++++ +  YVP V+D+ SS RVLTTELV G P+D   +  Q  R+Y+  K +EL L E+F++RFMQTDPNWSNF   +  KT    + L+DFGA+RAY K FVD Y+ ++ +  +GD++  IE SR +GFLTG E  +M DAHV++  I+G   A    Y+F   ++T  I  L   ML HRLT PP+E YSLHRKLSG +L   K+ A V C  L  +++E+Y FGE+
Sbjct:  519 ELIADWQDVYVPEVIDELSSSRVLTTELVYGKPVDACVEEPQVVRDYIAGKFIELCLKEIFLWRFMQTDPNWSNFFLGKHPKTGEPRLVLLDFGASRAYGKKFVDIYMNIIKSAYDGDKKKIIEYSREIGFLTGYETSVMEDAHVESVMIMGETLASNHPYNFANQDVTMRIQKLIPVMLEHRLTSPPEEIYSLHRKLSGCYLLAAKLKATVSCGGLFHEIHENYVFGED 748          
BLAST of CF833635 vs. ExPASy Swiss-Prot
Match: ADCK3_HUMAN (Chaperone activity of bc1 complex-like, mitochondrial OS=Homo sapiens GN=CABC1 PE=1 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 8.890e-56
Identity = 109/221 (49.32%), Postives = 140/221 (63.35%), Query Frame = -3
Query:  173 DVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELFVFRFMQTDPNWSNFLYDEATKTINLIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRLGFLTGMENVIMLDAHVQAAFIVGMPFAKPGGYDFCANNITQSISNLGATMLRHRLTPPPDEAYSLHRKLSGAFLACIKIGAVVPCRELLLDVYEHY 835
            D+L     FYVP +VD+  S  VLTTELVSG P+D+   LSQE RN +   +L L L ELF F FMQTDPNWSNF YD     + L+DFGA R Y +SF D Y++++ A A+ DRE+    S  + FLTG E  +M DAH+ A  I+G  FA    +DF   + T+ I NL   MLRHRL PPP+E YSLHRK+ G+FL C K+ A  PC+ +  + Y +Y
Sbjct:  420 DLLKGHPFFYVPEIVDELCSPHVLTTELVSGFPLDQAEGLSQEIRNEICYNILVLCLRELFEFHFMQTDPNWSNFFYDPQQHKVALLDFGATREYDRSFTDLYIQIIRAAADRDRETVRAKSIEMKFLTGYEVKVMEDAHLDAILILGEAFASDEPFDFGTQSTTEKIHNLIPVMLRHRLVPPPEETYSLHRKMGGSFLICSKLKARFPCKAMFEEAYSNY 640          
BLAST of CF833635 vs. ExPASy Swiss-Prot
Match: ADCK3_BOVIN (Chaperone activity of bc1 complex-like, mitochondrial OS=Bos taurus GN=CABC1 PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.516e-55
Identity = 107/221 (48.42%), Postives = 143/221 (64.71%), Query Frame = -3
Query:  173 DVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELFVFRFMQTDPNWSNFLYDEATKTINLIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRLGFLTGMENVIMLDAHVQAAFIVGMPFAKPGGYDFCANNITQSISNLGATMLRHRLTPPPDEAYSLHRKLSGAFLACIKIGAVVPCRELLLDVYEHY 835
            ++L +   FYVP +VD+  S  VLTTELVSG P+D+   LSQE RN +   +L L L ELF F+FMQTDPNWSNF YD     + L+DFGA R + +SF D Y++++ A AN DRE+ ++ S  + FLTG E   M DAH+ A  I+G  FA    +DF   + T+ I NL   ML+HRL PPP+E YSLHRK+ G+FL C K+ A  PC+ +  + Y +Y
Sbjct:  420 ELLKDHPFFYVPEIVDELCSPHVLTTELVSGFPLDQAEGLSQEIRNEICYNILVLCLRELFEFQFMQTDPNWSNFFYDPELHKVALLDFGATREFDRSFTDLYIQIIRAAANQDREAVLKKSIEMKFLTGYEVKAMEDAHLDAILILGEAFASEEPFDFGTQSTTEKIHNLIPIMLKHRLVPPPEETYSLHRKMGGSFLICSKLKARFPCKAMFEEAYSNY 640          
BLAST of CF833635 vs. ExPASy Swiss-Prot
Match: ADCK3_MOUSE (Chaperone activity of bc1 complex-like, mitochondrial OS=Mus musculus GN=Cabc1 PE=2 SV=2)

HSP 1 Score: 213.001 bits (541), Expect = 1.677e-54
Identity = 105/221 (47.51%), Postives = 141/221 (63.80%), Query Frame = -3
Query:  173 DVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELFVFRFMQTDPNWSNFLYDEATKTINLIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRLGFLTGMENVIMLDAHVQAAFIVGMPFAKPGGYDFCANNITQSISNLGATMLRHRLTPPPDEAYSLHRKLSGAFLACIKIGAVVPCRELLLDVYEHY 835
            ++L +   FYVP +VD+  S  VLTTEL+SG P+D+   LSQE RN +   +L L L ELF F  MQTDPNWSNF YD     + L+DFGA R Y +SF D Y++++ A A+ DRE+ ++ S  + FLTG E   M DAH+ A  I+G  FA    +DF   + T+ I NL   ML+HRL PPP+E YSLHRK+ G+FL C K+ A  PC+ +  + Y +Y
Sbjct:  417 ELLKDHPFFYVPEIVDELCSPHVLTTELISGFPLDQAEGLSQEVRNEICYNILVLCLRELFEFHVMQTDPNWSNFFYDPQQHKVALLDFGATREYDRSFTDLYIQVIRAAADQDREAVLKKSIEMKFLTGYEVKAMEDAHLDAILILGEAFASEEPFDFGTQSTTEKIHNLIPVMLKHRLIPPPEETYSLHRKMGGSFLICSKLKARFPCKAMFEEAYSNY 637          
BLAST of CF833635 vs. ExPASy Swiss-Prot
Match: ADCK3_RAT (Chaperone activity of bc1 complex-like, mitochondrial OS=Rattus norvegicus GN=Cabc1 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.860e-54
Identity = 104/221 (47.06%), Postives = 141/221 (63.80%), Query Frame = -3
Query:  173 DVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELFVFRFMQTDPNWSNFLYDEATKTINLIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRLGFLTGMENVIMLDAHVQAAFIVGMPFAKPGGYDFCANNITQSISNLGATMLRHRLTPPPDEAYSLHRKLSGAFLACIKIGAVVPCRELLLDVYEHY 835
            ++L +   FYVP +VD+  S  VLTTEL++G P+D+   LSQE RN +   +L L L ELF F  MQTDPNWSNF YD     + L+DFGA R Y +SF D Y++++ A A+ DRE+ ++ S  + FLTG E   M DAH+ A  I+G  FA    +DF   + T+ I NL   ML+HRL PPP+E YSLHRK+ G+FL C K+ A  PC+ +  + Y +Y
Sbjct:  421 ELLKDHPFFYVPEIVDELCSPHVLTTELITGFPLDQAEGLSQEVRNEICYNILVLCLRELFEFHVMQTDPNWSNFFYDPQQHKVALLDFGATREYDRSFTDLYIQVIRAAADQDREAVLKKSIEMKFLTGYEVKAMEDAHLDAILILGEAFASEEPFDFGTQSTTEKIHNLIPIMLKHRLIPPPEETYSLHRKMGGSFLICSKLKACFPCKAMFEEAYSNY 641          
BLAST of CF833635 vs. ExPASy Swiss-Prot
Match: ABCI_SCHPO (Protein ABC1 homolog, mitochondrial OS=Schizosaccharomyces pombe GN=abc1 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.866e-46
Identity = 98/222 (44.14%), Postives = 135/222 (60.81%), Query Frame = -3
Query:  173 VLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELFVFRFMQTDPNWSNFLYDEATKTINLIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRLGFLTGMENVIMLDAHVQAAFIVGMPFA--KPGGYDFCANNITQSISNLGATMLRHRLTPPPDEAYSLHRKLSGAFLACIKIGAVVPCRELLLDVYEHY 832
            +L N   F VP V  + S   V+T E + GI + K  + SQ TRN++G  L +  L E+  + FMQTDPNWSNFLY+  TK I L+DFGA+  Y + F+ +Y R+++A A+ +RE   ++S  LG+L   E+  M+DAH+ + F +  PFA   P  YDF    IT  +      ML  RL PPP+E YSLHR+LSG FL C K+GA V C+EL   + +HY
Sbjct:  388 LLKNDSDFKVPMVFREASGPSVITLEYLHGIALGK-QKYSQATRNHIGYLLTKQCLREISEYHFMQTDPNWSNFLYNGKTKKIELLDFGASIEYDEKFIKKYCRLLLAAAHRNREKCKKLSVELGYLNNHESAQMIDAHINSIFTLAEPFAFDAPDVYDFGDQTITARVKQQIPVMLDLRLQPPPEETYSLHRRLSGHFLLCAKLGAKVRCKELFSGMLKHY 608          
The following BLAST results are available for this feature:
BLAST of CF833635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
ADCK4_RAT5.568e-5850.00Uncharacterized aarF domain-containing protein kin... [more]
ADCK4_MOUSE1.620e-5750.00Uncharacterized aarF domain-containing protein kin... [more]
ADCK4_HUMAN2.116e-5748.46Uncharacterized aarF domain-containing protein kin... [more]
ADCK3_DANRE6.807e-5646.02Chaperone activity of bc1 complex-like, mitochondr... [more]
COQ8_CAEEL8.890e-5646.96Ubiquinone biosynthesis protein coq-8 OS=Caenorhab... [more]
ADCK3_HUMAN8.890e-5649.32Chaperone activity of bc1 complex-like, mitochondr... [more]
ADCK3_BOVIN1.516e-5548.42Chaperone activity of bc1 complex-like, mitochondr... [more]
ADCK3_MOUSE1.677e-5447.51Chaperone activity of bc1 complex-like, mitochondr... [more]
ADCK3_RAT2.860e-5447.06Chaperone activity of bc1 complex-like, mitochondr... [more]
ABCI_SCHPO2.866e-4644.14Protein ABC1 homolog, mitochondrial OS=Schizosacch... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_03P07_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa03P07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833635 ID=CF833635; Name=CF833635; organism=Citrus sinensis; type=EST; length=837bp
TTTTTTTTTTTTTTTTGTGGAATAAACAATTTCATACAATAATGGGATCG
ATAATTGCATCCCAAACTTATTGCACGTGTACGAATCAATCAAAATTTTG
GAAACAAAACTGATTAGACTATGACGATATTGAGCCACTTGACAAGAACT
CATCACTCTCTTCACCGAACTGATAATGCTCGTATACATCTAGTAGTAAT
TCCCTACATGGGACAACTGCCCCGATCTTGATACAAGCTAAGAAAGCACC
AGAAAGCTTCCGATGAAGACTATAAGCCTCATCAGGGGGTGGTGTAAGCC
TGTGCCTAAGCATCGTTGCCCCAAGGTTTGAAATGCTTTGGGTTATATTG
TTGGCACAGAAGTCATAGCCACCTGGTTTTGCAAATGGCATTCCCACTAT
AAATGCAGCCTGAACATGAGCATCTAACATTATCACATTTTCCATTCCAG
TAAGGAACCCTAGTCTTCGAGACATCTCAATCGCTGATTCTCTGTCACCA
TTTGCACATGCAACAACCATTCTCAAATACTCATCAACGAAGCTTTTAGG
GTATGCCCGAGCTGCTCCAAAGTCGATGAGATTGATTGTTTTTGTAGCCT
CATCATATAAGAAGTTACTCCAATTGGGATCAGTCTGCATGAACCGGAAG
ACAAAAAGCTCCATTAAAGTGAGTTCCAGCAACTTTTTCCCAACATAATT
TCGAGTTTCCTGGCTTAGTTGTGCCACCTTATCAATTGGTATGCCGGAAA
CAAGTTCTGTAGTTAGAACTCTTTTGCTAGAAGTATCATCCACAACATAT
GGGACATAAAACCCTTTTGCATTTGATAGCACATCTC
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