CF833636

Overview
NameCF833636
Unique NameCF833636
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length735
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833636 vs. ExPASy Swiss-Prot
Match: COQ8_CAEEL (Ubiquinone biosynthesis protein coq-8 OS=Caenorhabditis elegans GN=coq-8 PE=2 SV=2)

HSP 1 Score: 254.218 bits (648), Expect = 5.256e-67
Identity = 124/246 (50.41%), Postives = 171/246 (69.51%), Query Frame = 3
Query:    9 GSVWQSKLTSFDYEPLAAASIGQVHRAVTKDGMQVAMKIHYPGVADSIESDIQNVKILLDYTNLIPKGLYLDSAMKVAREELSRECDYEMEAANQKRFRDVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELFVFRFMQTDPNWSNFLYDEATKT----INLIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRLGFLTGMENVIMLDAHVQA 734
            G  W+ K   FD +P A ASIGQVH+AV KDG  VA+K+ YPGVA+ I+SDI N+  +L    + PKG++LD+ + VAR EL +ECDYE EA   K+FR+++++ +  YVP V+D+ SS RVLTTELV G P+D   +  Q  R+Y+  K +EL L E+F++RFMQTDPNWSNF   +  KT    + L+DFGA+RAY K FVD Y+ ++ +  +GD++  IE SR +GFLTG E  +M DAHV++
Sbjct:  420 GDDWREKFEHFDDKPFACASIGQVHKAVLKDGRNVAVKVQYPGVAEGIDSDIDNLVSVLSVGGIFPKGMFLDAFVGVARRELKQECDYEREARAMKKFRELIADWQDVYVPEVIDELSSSRVLTTELVYGKPVDACVEEPQVVRDYIAGKFIELCLKEIFLWRFMQTDPNWSNFFLGKHPKTGEPRLVLLDFGASRAYGKKFVDIYMNIIKSAYDGDKKKIIEYSREIGFLTGYETSVMEDAHVES 665          
BLAST of CF833636 vs. ExPASy Swiss-Prot
Match: ADCK3_BOVIN (Chaperone activity of bc1 complex-like, mitochondrial OS=Bos taurus GN=CABC1 PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.767e-65
Identity = 125/244 (51.23%), Postives = 166/244 (68.03%), Query Frame = 3
Query:    3 ELGSVWQSKLTSFDYEPLAAASIGQVHRAVTKDGMQVAMKIHYPGVADSIESDIQNVKILLDYTNLIPKGLYLDSAMKVAREELSRECDYEMEAANQKRFRDVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELFVFRFMQTDPNWSNFLYDEATKTINLIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRLGFLTGMENVIMLDAHVQA 734
            +LG  W+ KL  F+  P AAASIGQVH A  K G +VAMKI YPGVA SI SD+ N+  +L+ +N++P+GL+ +  + V R EL+ ECDY+ EAA  +RFR++L +   FYVP +VD+  S  VLTTELVSG P+D+   LSQE RN +   +L L L ELF F+FMQTDPNWSNF YD     + L+DFGA R + +SF D Y++++ A AN DRE+ ++ S  + FLTG E   M DAH+ A
Sbjct:  319 DLGPNWRDKLEYFEERPFAAASIGQVHLARLKGGREVAMKIQYPGVAQSINSDVNNLMTVLNMSNMLPEGLFPEHLIDVLRRELALECDYQREAACARRFRELLKDHPFFYVPEIVDELCSPHVLTTELVSGFPLDQAEGLSQEIRNEICYNILVLCLRELFEFQFMQTDPNWSNFFYDPELHKVALLDFGATREFDRSFTDLYIQIIRAAANQDREAVLKKSIEMKFLTGYEVKAMEDAHLDA 562          
BLAST of CF833636 vs. ExPASy Swiss-Prot
Match: ADCK3_HUMAN (Chaperone activity of bc1 complex-like, mitochondrial OS=Homo sapiens GN=CABC1 PE=1 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.431e-64
Identity = 125/244 (51.23%), Postives = 163/244 (66.80%), Query Frame = 3
Query:    3 ELGSVWQSKLTSFDYEPLAAASIGQVHRAVTKDGMQVAMKIHYPGVADSIESDIQNVKILLDYTNLIPKGLYLDSAMKVAREELSRECDYEMEAANQKRFRDVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELFVFRFMQTDPNWSNFLYDEATKTINLIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRLGFLTGMENVIMLDAHVQA 734
            +LG  W+ KL  F+  P AAASIGQVH A  K G +VAMKI YPGVA SI SD+ N+  +L+ +N++P+GL+ +  + V R EL+ ECDY+ EAA  ++FRD+L     FYVP +VD+  S  VLTTELVSG P+D+   LSQE RN +   +L L L ELF F FMQTDPNWSNF YD     + L+DFGA R Y +SF D Y++++ A A+ DRE+    S  + FLTG E  +M DAH+ A
Sbjct:  319 DLGPNWRDKLEYFEERPFAAASIGQVHLARMKGGREVAMKIQYPGVAQSINSDVNNLMAVLNMSNMLPEGLFPEHLIDVLRRELALECDYQREAACARKFRDLLKGHPFFYVPEIVDELCSPHVLTTELVSGFPLDQAEGLSQEIRNEICYNILVLCLRELFEFHFMQTDPNWSNFFYDPQQHKVALLDFGATREYDRSFTDLYIQIIRAAADRDRETVRAKSIEMKFLTGYEVKVMEDAHLDA 562          
BLAST of CF833636 vs. ExPASy Swiss-Prot
Match: ADCK3_MOUSE (Chaperone activity of bc1 complex-like, mitochondrial OS=Mus musculus GN=Cabc1 PE=2 SV=2)

HSP 1 Score: 244.973 bits (624), Expect = 3.189e-64
Identity = 123/244 (50.41%), Postives = 164/244 (67.21%), Query Frame = 3
Query:    3 ELGSVWQSKLTSFDYEPLAAASIGQVHRAVTKDGMQVAMKIHYPGVADSIESDIQNVKILLDYTNLIPKGLYLDSAMKVAREELSRECDYEMEAANQKRFRDVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELFVFRFMQTDPNWSNFLYDEATKTINLIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRLGFLTGMENVIMLDAHVQA 734
            +LG  W+ KL  F+  P AAASIGQVH A  K G +VAMKI YPGVA SI SD+ N+  +L+ +N++P+GL+ +  + V R EL+ ECDY+ EAA  K+FR++L +   FYVP +VD+  S  VLTTEL+SG P+D+   LSQE RN +   +L L L ELF F  MQTDPNWSNF YD     + L+DFGA R Y +SF D Y++++ A A+ DRE+ ++ S  + FLTG E   M DAH+ A
Sbjct:  316 DLGPHWRDKLEYFEERPFAAASIGQVHLARMKGGREVAMKIQYPGVAQSINSDVNNLMAVLNMSNMLPEGLFPEHLIDVLRRELTLECDYQREAAYAKKFRELLKDHPFFYVPEIVDELCSPHVLTTELISGFPLDQAEGLSQEVRNEICYNILVLCLRELFEFHVMQTDPNWSNFFYDPQQHKVALLDFGATREYDRSFTDLYIQVIRAAADQDREAVLKKSIEMKFLTGYEVKAMEDAHLDA 559          
BLAST of CF833636 vs. ExPASy Swiss-Prot
Match: ADCK4_RAT (Uncharacterized aarF domain-containing protein kinase 4 OS=Rattus norvegicus GN=Adck4 PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 7.104e-64
Identity = 121/244 (49.59%), Postives = 169/244 (69.26%), Query Frame = 3
Query:    3 ELGSVWQSKLTSFDYEPLAAASIGQVHRAVTKDGMQVAMKIHYPGVADSIESDIQNVKILLDYTNLIPKGLYLDSAMKVAREELSRECDYEMEAANQKRFRDVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELFVFRFMQTDPNWSNFLYDEATKTINLIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRLGFLTGMENVIMLDAHVQA 734
            ELG  WQ K+ S +  P AAASIGQVH+ V KDG +VA+KI YPGVA+SI+SD+QN+  LL  +  +P+GL+ + +++  ++EL+ ECDY  EAA  + F+ +L++   F VP VV++  + RVL  EL  GIP+D+   LSQ+ RN +  +LL L L ELF FRFMQTDPNW+NFLYD ++  + L+DFGA+RA+   F D Y+ +V A A+GDR+  ++ S+ L FLTG E     DAHV+A
Sbjct:  194 ELGKDWQDKVASLEEVPFAAASIGQVHQGVLKDGTEVAVKIQYPGVAESIQSDVQNLLALLKMSVGLPEGLFAEQSLQTLQQELAWECDYRREAACAQTFKKLLADDPFFRVPAVVEELCTTRVLGMELAGGIPLDQCQGLSQDIRNQICFQLLRLCLRELFEFRFMQTDPNWANFLYDASSHKVTLLDFGASRAFGTEFTDHYIEVVKAAADGDRDRVLQKSQDLKFLTGFETKAFSDAHVEA 437          
BLAST of CF833636 vs. ExPASy Swiss-Prot
Match: ADCK3_RAT (Chaperone activity of bc1 complex-like, mitochondrial OS=Rattus norvegicus GN=Cabc1 PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 7.104e-64
Identity = 122/244 (50.00%), Postives = 164/244 (67.21%), Query Frame = 3
Query:    3 ELGSVWQSKLTSFDYEPLAAASIGQVHRAVTKDGMQVAMKIHYPGVADSIESDIQNVKILLDYTNLIPKGLYLDSAMKVAREELSRECDYEMEAANQKRFRDVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELFVFRFMQTDPNWSNFLYDEATKTINLIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRLGFLTGMENVIMLDAHVQA 734
            +LG  W+ KL  F+  P AAASIGQVH A  K G +VAMKI YPGVA SI SD+ N+  +L+ +N++P+GL+ +  + V R EL+ ECDY+ EAA  K+FR++L +   FYVP +VD+  S  VLTTEL++G P+D+   LSQE RN +   +L L L ELF F  MQTDPNWSNF YD     + L+DFGA R Y +SF D Y++++ A A+ DRE+ ++ S  + FLTG E   M DAH+ A
Sbjct:  320 DLGPHWRDKLEYFEERPFAAASIGQVHLARLKGGREVAMKIQYPGVAQSINSDVNNLMAVLNMSNMLPEGLFPEHLIDVLRRELTLECDYQREAAYAKKFRELLKDHPFFYVPEIVDELCSPHVLTTELITGFPLDQAEGLSQEVRNEICYNILVLCLRELFEFHVMQTDPNWSNFFYDPQQHKVALLDFGATREYDRSFTDLYIQVIRAAADQDREAVLKKSIEMKFLTGYEVKAMEDAHLDA 563          
BLAST of CF833636 vs. ExPASy Swiss-Prot
Match: ADCK4_HUMAN (Uncharacterized aarF domain-containing protein kinase 4 OS=Homo sapiens GN=ADCK4 PE=1 SV=2)

HSP 1 Score: 241.506 bits (615), Expect = 3.525e-63
Identity = 118/244 (48.36%), Postives = 166/244 (68.03%), Query Frame = 3
Query:    3 ELGSVWQSKLTSFDYEPLAAASIGQVHRAVTKDGMQVAMKIHYPGVADSIESDIQNVKILLDYTNLIPKGLYLDSAMKVAREELSRECDYEMEAANQKRFRDVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELFVFRFMQTDPNWSNFLYDEATKTINLIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRLGFLTGMENVIMLDAHVQA 734
            ELG  WQ+K+ S +  P AAASIGQVH+ + +DG +VA+KI YPG+A SI+SD+QN+  +L  +  +P GL+ + +++  ++EL+ ECDY  EAA  + FR +L+N   F VP VV +  + RVL  EL  G+P+D+   LSQ+ RN +  +LL L L ELF FRFMQTDPNW+NFLYD ++  + L+DFGA+R +   F D Y+ +V A A+GDR+  ++ SR L FLTG E     DAHV+A
Sbjct:  198 ELGRDWQAKVASLEEVPFAAASIGQVHQGLLRDGTEVAVKIQYPGIAQSIQSDVQNLLAVLKMSAALPAGLFAEQSLQALQQELAWECDYRREAACAQNFRQLLANDPFFRVPAVVKELCTTRVLGMELAGGVPLDQCQGLSQDLRNQICFQLLTLCLRELFEFRFMQTDPNWANFLYDASSHQVTLLDFGASREFGTEFTDHYIEVVKAAADGDRDCVLQKSRDLKFLTGFETKAFSDAHVEA 441          
BLAST of CF833636 vs. ExPASy Swiss-Prot
Match: ADCK4_MOUSE (Uncharacterized aarF domain-containing protein kinase 4 OS=Mus musculus GN=Adck4 PE=2 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 4.604e-63
Identity = 120/244 (49.18%), Postives = 167/244 (68.44%), Query Frame = 3
Query:    3 ELGSVWQSKLTSFDYEPLAAASIGQVHRAVTKDGMQVAMKIHYPGVADSIESDIQNVKILLDYTNLIPKGLYLDSAMKVAREELSRECDYEMEAANQKRFRDVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELFVFRFMQTDPNWSNFLYDEATKTINLIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRLGFLTGMENVIMLDAHVQA 734
            ELG  WQ K+ S +  P AAASIGQVH+ + KDG +VA+KI YPGVA SI+SD++N+  LL  +  +P+GL+ + +++  ++EL+ ECDY  EAA  + FR +L++   F VP VV +  + RVL  EL  GIP+D+   LSQ+ RN +  +LL L L ELF FRFMQTDPNW+NFLYD ++  + L+DFGA+RA+   F D Y+ +V A A+GDR+  ++ S+ L FLTG E     DAHV+A
Sbjct:  199 ELGKDWQDKVASLEEVPFAAASIGQVHQGLLKDGTEVAVKIQYPGVAQSIQSDVENLLALLKMSVGLPEGLFAEQSLQTLQQELAWECDYRREAACAQTFRKLLADDPFFRVPAVVQELCTTRVLGMELAGGIPLDQCQGLSQDIRNQICFQLLRLCLRELFEFRFMQTDPNWANFLYDASSHQVTLLDFGASRAFGTEFTDHYIEVVKAAADGDRDRVLQKSQDLKFLTGFETKAFSDAHVEA 442          
BLAST of CF833636 vs. ExPASy Swiss-Prot
Match: ABKA_DICDI (Probable serine/threonine-protein kinase abkA OS=Dictyostelium discoideum GN=abkA PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.695e-57
Identity = 119/258 (46.12%), Postives = 164/258 (63.57%), Query Frame = 3
Query:    3 ELGSVWQSKLTSFDYEPLAAASIGQVHRAVTKDGMQVAMKIHYPGVADSIESDIQNVKILLDYTNLIPKGLYLDSAMKVAREELSRECDYEMEAANQKRFRDVLSNA------------KGFYVPYVVDDTSSKRVLTTELVSGIPIDKVA--QLSQETRNYVGKKLLELTLMELFVFRFMQTDPNWSNFLYDEATKTINLIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRLGFLTGMENVIMLDAHVQA 734
            ELG  W+SK   F  +P+AAASIGQVHRA+T DG +VA+K+ YPGVADSI SDI+N+  LL    ++P+  Y++ +++ AR EL  E DY  EA+NQ +F+ +L ++            K  YVP V+ + ++KR+LTTE V G  IDK+     +QETR+++ K +L L L ELF F FMQ DPNW+NF+ D   K INL+DFGA R Y   F+  YL+ +    N D    +E S +LG+LTG EN  M DA  ++
Sbjct:  220 ELGENWRSKFQLFQDDPIAAASIGQVHRAITLDGKEVAVKVQYPGVADSITSDIKNLSSLLKM--IVPETAYIEKSLESARSELLLETDYLNEASNQLKFKSLLESSINSGTNGSFKYLKDLYVPNVIMELTTKRILTTEFVHGTSIDKITIENHNQETRDWISKNILSLCLAELFEFNFMQVDPNWTNFVVDFENKRINLLDFGACRNYKSEFLFNYLKSIEGGVNRDINQILEYSLKLGYLTGDENKQMNDAQAKS 475          
BLAST of CF833636 vs. ExPASy Swiss-Prot
Match: ABC1_YEAST (Protein ABC1, mitochondrial OS=Saccharomyces cerevisiae GN=ABC1 PE=1 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 2.891e-57
Identity = 107/244 (43.85%), Postives = 164/244 (67.21%), Query Frame = 3
Query:    3 ELGSVWQSKLTSFDYEPLAAASIGQVHRAVTKDGMQVAMKIHYPGVADSIESDIQNVKILLDYTNLIPKGLYLDSAMKVAREELSRECDYEMEAANQKRFRDVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQETRNYVGKKLLELTLMELFVFRFMQTDPNWSNFLYDEATKTINLIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRLGFLTGMENVIMLDAHVQA 734
            ELG+ W++K + FD  P+AAASIGQVH A    G +V +KI YPGV +SI+SD+ ++ +LL  ++L+PKGL+LD  +  AR EL  ECDY  EA   ++F  +L +   F VP+V  + ++  ++T   + G  I K+ + SQET+N++ + ++ L L E+  F++MQTDPNW+NFLY+  TK I L+DFGA+R + + F+ +Y +++      DR+ A EMS +LG+LTG+E+  M DAHV +
Sbjct:  177 ELGANWKTKFSKFDKIPMAAASIGQVHAAELPSGQRVVVKIQYPGVKESIDSDLNSLLMLLTASSLLPKGLFLDKTIANARTELKWECDYNREARALQKFEALLKDDPAFEVPHVFPEYTTDNIITMTRMEGTEIMKLPKASQETKNFISENIMRLCLEEIATFKYMQTDPNWANFLYNGRTKKIELLDFGASRPFAEDFILKYRKLLTYATLRDRKGAYEMSVQLGYLTGLESQSMKDAHVDS 420          
The following BLAST results are available for this feature:
BLAST of CF833636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
COQ8_CAEEL5.256e-6750.41Ubiquinone biosynthesis protein coq-8 OS=Caenorhab... [more]
ADCK3_BOVIN3.767e-6551.23Chaperone activity of bc1 complex-like, mitochondr... [more]
ADCK3_HUMAN1.431e-6451.23Chaperone activity of bc1 complex-like, mitochondr... [more]
ADCK3_MOUSE3.189e-6450.41Chaperone activity of bc1 complex-like, mitochondr... [more]
ADCK4_RAT7.104e-6449.59Uncharacterized aarF domain-containing protein kin... [more]
ADCK3_RAT7.104e-6450.00Chaperone activity of bc1 complex-like, mitochondr... [more]
ADCK4_HUMAN3.525e-6348.36Uncharacterized aarF domain-containing protein kin... [more]
ADCK4_MOUSE4.604e-6349.18Uncharacterized aarF domain-containing protein kin... [more]
ABKA_DICDI1.695e-5746.12Probable serine/threonine-protein kinase abkA OS=D... [more]
ABC1_YEAST2.891e-5743.85Protein ABC1, mitochondrial OS=Saccharomyces cerev... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_03P07_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa03P07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833636 ID=CF833636; Name=CF833636; organism=Citrus sinensis; type=EST; length=735bp
CTGAATTAGGTTCTGTTTGGCAATCAAAGTTGACTAGTTTTGATTATGAA
CCACTGGCTGCTGCAAGTATAGGCCAGGTCCATCGAGCTGTCACAAAGGA
TGGTATGCAGGTTGCAATGAAAATTCACTATCCTGGTGTTGCAGATAGTA
TTGAAAGTGACATTCAGAATGTAAAAATTTTGTTAGATTATACAAATCTA
ATTCCAAAAGGGCTTTATCTTGACAGCGCAATGAAGGTGGCAAGAGAAGA
ATTATCACGTGAATGTGACTATGAAATGGAGGCAGCCAATCAGAAACGCT
TCAGAGATGTGCTATCAAATGCAAAAGGGTTTTATGTCCCATATGTTGTG
GATGATACTTCTAGCAAAAGAGTTCTAACTACAGAACTTGTTTCCGGCAT
ACCAATTGATAAGGTGGCACAACTAAGCCAGGAAACTCGAAATTATGTTG
GGAAAAAGTTGCTGGAACTCACTTTAATGGAGCTTTTTGTCTTCCGGTTC
ATGCAGACTGATCCCAATTGGAGTAACTTCTTATATGATGAGGCTACAAA
AACAATCAATCTCATCGACTTTGGAGCAGCTCGGGCATACCCTAAAAGCT
TCGTTGATGAGTATTTGAGAATGGTTGTTGCATGTGCAAATGGTGACAGA
GAATCAGCGATTGAGATGTCTCGAAGACTAGGGTTCCTTACTGGAATGGA
AAATGTGATAATGTTAGATGCTCATGTTCAGGCTG
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