CF833695

Overview
NameCF833695
Unique NameCF833695
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length655
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF833695 vs. ExPASy Swiss-Prot
Match: EHD1_BOVIN (EH domain-containing protein 1 OS=Bos taurus GN=EHD1 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 5.257e-49
Identity = 92/179 (51.40%), Postives = 130/179 (72.63%), Query Frame = -3 
Query:  117 KADQVDTQHLMRVYGAMMWSLGKVLNTPEVVRVYIGSFNDKPINGEVVGPIGQELFEKEQDDLLMDLIDIPKKACDRQINEFVKRARAAKIHAYIISHLKKEMPTMMGKAKAQQRLIDNLEDEFAKVQREFHLPGGDFPNVEHFREVLNSYNIDKFEKLKPKMIQVVDDMLAYEIPELL 653
            KADQ++TQ LMRVYGA+MWSLGK++NTPEVVRVYIGSF   P+    + P  ++LFE E+ DL  D+  +P+ A  R++N+ +KRAR AK+HAYIIS LKKEMP + GK   ++ L++NL + + K++RE  +  GDFPN+   +E+L + +  KF+ LKPK++  VDDMLA +I  L+
Sbjct:  220 KADQIETQQLMRVYGALMWSLGKIINTPEVVRVYIGSFWSHPL----LIPDNRKLFEAEEQDLFKDIQSLPRNAALRKLNDLIKRARLAKVHAYIISSLKKEMPNVFGKESKKKELVNNLGEIYQKIEREHQISPGDFPNLRKMQELLQTQDFSKFQALKPKLLDTVDDMLANDIARLM 394
[Close]
BLAST of CF833695 vs. ExPASy Swiss-Prot
Match: EHD3_HUMAN (EH domain-containing protein 3 OS=Homo sapiens GN=EHD3 PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.171e-48
Identity = 89/179 (49.72%), Postives = 134/179 (74.86%), Query Frame = -3 
Query:  117 KADQVDTQHLMRVYGAMMWSLGKVLNTPEVVRVYIGSFNDKPINGEVVGPIGQELFEKEQDDLLMDLIDIPKKACDRQINEFVKRARAAKIHAYIISHLKKEMPTMMGKAKAQQRLIDNLEDEFAKVQREFHLPGGDFPNVEHFREVLNSYNIDKFEKLKPKMIQVVDDMLAYEIPELL 653
            KADQ++TQ LMRVYGA+MWSLGK++NTPEV+RVYIGSF   P+    + P  ++LFE E+ DL  D+  +P+ A  R++N+ +KRAR AK+HAYIIS LKKEMP++ GK   ++ L++NL + + +++RE  +  GDFPN++  ++ L + +  KF+ LK K+++VVDDMLA++I +L+
Sbjct:  220 KADQIETQQLMRVYGALMWSLGKIVNTPEVIRVYIGSFWSHPL----LIPDNRKLFEAEEQDLFRDIQSLPRNAALRKLNDLIKRARLAKVHAYIISSLKKEMPSVFGKDNKKKELVNNLAEIYGRIEREHQISPGDFPNLKRMQDQLQAQDFSKFQPLKSKLLEVVDDMLAHDIAQLM 394
[Close]
BLAST of CF833695 vs. ExPASy Swiss-Prot
Match: EHD1_RAT (EH domain-containing protein 1 OS=Rattus norvegicus GN=Ehd1 PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.171e-48
Identity = 91/179 (50.84%), Postives = 130/179 (72.63%), Query Frame = -3 
Query:  117 KADQVDTQHLMRVYGAMMWSLGKVLNTPEVVRVYIGSFNDKPINGEVVGPIGQELFEKEQDDLLMDLIDIPKKACDRQINEFVKRARAAKIHAYIISHLKKEMPTMMGKAKAQQRLIDNLEDEFAKVQREFHLPGGDFPNVEHFREVLNSYNIDKFEKLKPKMIQVVDDMLAYEIPELL 653
            KADQ++TQ LMRVYGA+MWSLGK++NTPEVVRVYIGSF   P+    + P  ++LFE E+ DL  D+  +P+ A  R++N+ +KRAR AK+HAYIIS LKKEMP + GK   ++ L++NL + + K++RE  +  GDFP++   +E+L + +  KF+ LKPK++  VDDMLA +I  L+
Sbjct:  220 KADQIETQQLMRVYGALMWSLGKIINTPEVVRVYIGSFWSHPL----LIPDNRKLFEAEEQDLFKDIQSLPRNAALRKLNDLIKRARLAKVHAYIISSLKKEMPNVFGKESKKKELVNNLGEIYQKIEREHQISSGDFPSLRKMQELLQTQDFSKFQALKPKLLDTVDDMLANDIARLM 394
[Close]
BLAST of CF833695 vs. ExPASy Swiss-Prot
Match: EHD1_MOUSE (EH domain-containing protein 1 OS=Mus musculus GN=Ehd1 PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.171e-48
Identity = 91/179 (50.84%), Postives = 130/179 (72.63%), Query Frame = -3 
Query:  117 KADQVDTQHLMRVYGAMMWSLGKVLNTPEVVRVYIGSFNDKPINGEVVGPIGQELFEKEQDDLLMDLIDIPKKACDRQINEFVKRARAAKIHAYIISHLKKEMPTMMGKAKAQQRLIDNLEDEFAKVQREFHLPGGDFPNVEHFREVLNSYNIDKFEKLKPKMIQVVDDMLAYEIPELL 653
            KADQ++TQ LMRVYGA+MWSLGK++NTPEVVRVYIGSF   P+    + P  ++LFE E+ DL  D+  +P+ A  R++N+ +KRAR AK+HAYIIS LKKEMP + GK   ++ L++NL + + K++RE  +  GDFP++   +E+L + +  KF+ LKPK++  VDDMLA +I  L+
Sbjct:  220 KADQIETQQLMRVYGALMWSLGKIINTPEVVRVYIGSFWSHPL----LIPDNRKLFEAEEQDLFKDIQSLPRNAALRKLNDLIKRARLAKVHAYIISSLKKEMPNVFGKESKKKELVNNLGEIYQKIEREHQISSGDFPSLRKMQELLQTQDFSKFQALKPKLLDTVDDMLANDIARLM 394
[Close]
BLAST of CF833695 vs. ExPASy Swiss-Prot
Match: EHD4_MOUSE (EH domain-containing protein 4 OS=Mus musculus GN=Ehd4 PE=1 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.530e-48
Identity = 95/179 (53.07%), Postives = 127/179 (70.95%), Query Frame = -3 
Query:  117 KADQVDTQHLMRVYGAMMWSLGKVLNTPEVVRVYIGSFNDKPINGEVVGPIGQELFEKEQDDLLMDLIDIPKKACDRQINEFVKRARAAKIHAYIISHLKKEMPTMMGKAKAQQRLIDNLEDEFAKVQREFHLPGGDFPNVEHFREVLNSYNIDKFEKLKPKMIQVVDDMLAYEIPELL 653
            KADQVDTQ LMRVYGA+MWSLGKV+NTPEV+RVYIGSF  +P+         + LFE E  DL  D+  +P+KA  R++N+ +KRAR AK+HAYIIS+LKKEMP M GK   ++ LI  L + + ++QRE+ +  GDFP V+  +E L +Y+  KF  LKPK+I+ VD+ML  +I  L+
Sbjct:  223 KADQVDTQQLMRVYGALMWSLGKVINTPEVLRVYIGSFWAQPLQNTD----NRRLFEAEAQDLFRDIQSLPQKAAVRKLNDLIKRARLAKVHAYIISYLKKEMPNMFGKENKKRELIYRLPEIYVQLQREYQISAGDFPEVKAMQEQLENYDFTKFHSLKPKLIEAVDNMLTNKISSLM 397
[Close]
BLAST of CF833695 vs. ExPASy Swiss-Prot
Match: EHD3_RAT (EH domain-containing protein 3 OS=Rattus norvegicus GN=Ehd3 PE=1 SV=2)

HSP 1 Score: 192.586 bits (488), Expect = 1.530e-48
Identity = 89/179 (49.72%), Postives = 134/179 (74.86%), Query Frame = -3 
Query:  117 KADQVDTQHLMRVYGAMMWSLGKVLNTPEVVRVYIGSFNDKPINGEVVGPIGQELFEKEQDDLLMDLIDIPKKACDRQINEFVKRARAAKIHAYIISHLKKEMPTMMGKAKAQQRLIDNLEDEFAKVQREFHLPGGDFPNVEHFREVLNSYNIDKFEKLKPKMIQVVDDMLAYEIPELL 653
            KADQ++TQ LMRVYGA+MWSLGK++NTPEV+RVYIGSF   P+    + P  ++LFE E+ DL  D+  +P+ A  R++N+ +KRAR AK+HAYIIS LKKEMP++ GK   ++ L++NL + + +++RE  +  GDFPN++  ++ L + +  KF+ LK K+++VVDDMLA++I +L+
Sbjct:  220 KADQIETQQLMRVYGALMWSLGKIVNTPEVIRVYIGSFWSHPL----LIPDNRKLFEAEEQDLFKDIQSLPRNAALRKLNDLIKRARLAKVHAYIISSLKKEMPSVFGKDTKKKELVNNLAEIYGRIEREHQISPGDFPNLKRMQDQLQAQDFSKFQPLKSKLLEVVDDMLAHDIAQLM 394
[Close]
BLAST of CF833695 vs. ExPASy Swiss-Prot
Match: EHD3_MOUSE (EH domain-containing protein 3 OS=Mus musculus GN=Ehd3 PE=1 SV=2)

HSP 1 Score: 192.586 bits (488), Expect = 1.530e-48
Identity = 89/179 (49.72%), Postives = 134/179 (74.86%), Query Frame = -3 
Query:  117 KADQVDTQHLMRVYGAMMWSLGKVLNTPEVVRVYIGSFNDKPINGEVVGPIGQELFEKEQDDLLMDLIDIPKKACDRQINEFVKRARAAKIHAYIISHLKKEMPTMMGKAKAQQRLIDNLEDEFAKVQREFHLPGGDFPNVEHFREVLNSYNIDKFEKLKPKMIQVVDDMLAYEIPELL 653
            KADQ++TQ LMRVYGA+MWSLGK++NTPEV+RVYIGSF   P+    + P  ++LFE E+ DL  D+  +P+ A  R++N+ +KRAR AK+HAYIIS LKKEMP++ GK   ++ L++NL + + +++RE  +  GDFPN++  ++ L + +  KF+ LK K+++VVDDMLA++I +L+
Sbjct:  220 KADQIETQQLMRVYGALMWSLGKIVNTPEVIRVYIGSFWSHPL----LIPDNRKLFEAEEQDLFRDIQSLPRNAALRKLNDLIKRARLAKVHAYIISSLKKEMPSVFGKDTKKKELVNNLAEIYGRIEREHQISPGDFPNLKRMQDQLQAQDFSKFQPLKSKLLEVVDDMLAHDIAQLM 394
[Close]
BLAST of CF833695 vs. ExPASy Swiss-Prot
Match: EHD4_HUMAN (EH domain-containing protein 4 OS=Homo sapiens GN=EHD4 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.998e-48
Identity = 94/179 (52.51%), Postives = 129/179 (72.07%), Query Frame = -3 
Query:  117 KADQVDTQHLMRVYGAMMWSLGKVLNTPEVVRVYIGSFNDKPINGEVVGPIGQELFEKEQDDLLMDLIDIPKKACDRQINEFVKRARAAKIHAYIISHLKKEMPTMMGKAKAQQRLIDNLEDEFAKVQREFHLPGGDFPNVEHFREVLNSYNIDKFEKLKPKMIQVVDDMLAYEIPELL 653
            KADQVDTQ LMRVYGA+MWSLGKV+NTPEV+RVYIGSF  +P+         + LFE E  DL  D+  +P+KA  R++N+ +KRAR AK+HAYIIS+LKKEMP++ GK   ++ LI  L + + ++QRE+ +  GDFP V+  +E L +Y+  KF  LKPK+I+ VD+ML+ +I  L+
Sbjct:  223 KADQVDTQQLMRVYGALMWSLGKVINTPEVLRVYIGSFWAQPLQNTD----NRRLFEAEAQDLFRDIQSLPQKAAVRKLNDLIKRARLAKVHAYIISYLKKEMPSVFGKENKKRELISRLPEIYIQLQREYQISAGDFPEVKAMQEQLENYDFTKFHSLKPKLIEAVDNMLSNKISPLM 397
[Close]
BLAST of CF833695 vs. ExPASy Swiss-Prot
Match: EHD1_PONAB (EH domain-containing protein 1 OS=Pongo abelii GN=EHD1 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.998e-48
Identity = 91/179 (50.84%), Postives = 130/179 (72.63%), Query Frame = -3 
Query:  117 KADQVDTQHLMRVYGAMMWSLGKVLNTPEVVRVYIGSFNDKPINGEVVGPIGQELFEKEQDDLLMDLIDIPKKACDRQINEFVKRARAAKIHAYIISHLKKEMPTMMGKAKAQQRLIDNLEDEFAKVQREFHLPGGDFPNVEHFREVLNSYNIDKFEKLKPKMIQVVDDMLAYEIPELL 653
            KADQ++TQ LMRVYGA+MWSLGK++NTPEVVRVYIGSF   P+    + P  ++LFE E+ DL  D+  +P+ A  R++N+ +KRAR AK+HAYIIS LKKEMP + GK   ++ L++NL + + K++RE  +  GDFP++   +E+L + +  KF+ LKPK++  VDDMLA +I  L+
Sbjct:  220 KADQIETQQLMRVYGALMWSLGKIINTPEVVRVYIGSFWSHPL----LIPDNRKLFEAEEQDLFKDIQSLPRNAALRKLNDLIKRARLAKVHAYIISSLKKEMPNVFGKESKKKELVNNLGEIYQKIEREHQISPGDFPSLRKMQELLQTQDFSKFQALKPKLLDTVDDMLANDIARLM 394
[Close]
BLAST of CF833695 vs. ExPASy Swiss-Prot
Match: EHD1_HUMAN (EH domain-containing protein 1 OS=Homo sapiens GN=EHD1 PE=1 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 1.998e-48
Identity = 91/179 (50.84%), Postives = 130/179 (72.63%), Query Frame = -3 
Query:  117 KADQVDTQHLMRVYGAMMWSLGKVLNTPEVVRVYIGSFNDKPINGEVVGPIGQELFEKEQDDLLMDLIDIPKKACDRQINEFVKRARAAKIHAYIISHLKKEMPTMMGKAKAQQRLIDNLEDEFAKVQREFHLPGGDFPNVEHFREVLNSYNIDKFEKLKPKMIQVVDDMLAYEIPELL 653
            KADQ++TQ LMRVYGA+MWSLGK++NTPEVVRVYIGSF   P+    + P  ++LFE E+ DL  D+  +P+ A  R++N+ +KRAR AK+HAYIIS LKKEMP + GK   ++ L++NL + + K++RE  +  GDFP++   +E+L + +  KF+ LKPK++  VDDMLA +I  L+
Sbjct:  220 KADQIETQQLMRVYGALMWSLGKIINTPEVVRVYIGSFWSHPL----LIPDNRKLFEAEEQDLFKDIQSLPRNAALRKLNDLIKRARLAKVHAYIISSLKKEMPNVFGKESKKKELVNNLGEIYQKIEREHQISPGDFPSLRKMQELLQTQDFSKFQALKPKLLDTVDDMLANDIARLM 394
The following BLAST results are available for this feature:
BLAST of CF833695 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
EHD1_BOVIN5.257e-4951.40EH domain-containing protein 1 OS=Bos taurus GN=EH... [more]
EHD3_HUMAN1.171e-4849.72EH domain-containing protein 3 OS=Homo sapiens GN=... [more]
EHD1_RAT1.171e-4850.84EH domain-containing protein 1 OS=Rattus norvegicu... [more]
EHD1_MOUSE1.171e-4850.84EH domain-containing protein 1 OS=Mus musculus GN=... [more]
EHD4_MOUSE1.530e-4853.07EH domain-containing protein 4 OS=Mus musculus GN=... [more]
EHD3_RAT1.530e-4849.72EH domain-containing protein 3 OS=Rattus norvegicu... [more]
EHD3_MOUSE1.530e-4849.72EH domain-containing protein 3 OS=Mus musculus GN=... [more]
EHD4_HUMAN1.998e-4852.51EH domain-containing protein 4 OS=Homo sapiens GN=... [more]
EHD1_PONAB1.998e-4850.84EH domain-containing protein 1 OS=Pongo abelii GN=... [more]
EHD1_HUMAN1.998e-4850.84EH domain-containing protein 1 OS=Homo sapiens GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04B08_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833695 ID=CF833695; Name=CF833695; organism=Citrus sinensis; type=EST; length=655bp
GAAGCCAATGCATTAGGGCATTGAAAATACATTCACTTCAGTATCCTTCT
TCAGGTTTCGCTCAACATTCACTGGGTTTTGGGAGGATTCTATTCATAGG
GGTTTCTGAAGTTCTTCAATAACTCTGGGATTTCATAAGCAAGCATGTCG
TCAACAACCTGAATCATCTTTGGTTTCAGTTTTTCAAATTTGTCAATGTT
GTAACTGTTTAAGACCTCACGGAAGTGCTCCACATTTGGGAAATCTCCTC
CTGGTAGATGGAATTCCCTTTGAACCTTTGCAAATTCGTCTTCAAGATTA
TCAATTAGGCGTTGTTGAGCCTTAGCTTTTCCCATCATGGTTGGCATCTC
CTTCTTGAGATGGCTGATAATATATGCATGGATTTTAGCAGCCCTAGCTC
GCTTCACAAATTCATTGATTTGTCGATCACAGGCTTTCTTTGGAATATCA
ATCAAATCCATTAGGAGGTCATCTTGTTCTTTCTCAAAAAGCTCTTGCCC
TATTGGACCAACAACCTCTCCATTAATAGGTTTGTCATTAAAAGAGCCAA
TATAAACGCGTACAACCTCAGGAGTGTTCAGGACCTTTCCAAGAGACCAC
ATCATTGCTCCATAAACTCTCATCAGATGTTGAGTATCAACTTGGTCAGC
TTTAT
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