CF833760

Overview
NameCF833760
Unique NameCF833760
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833760 vs. ExPASy Swiss-Prot
Match: PNCB_DROME (Nicotinate phosphoribosyltransferase OS=Drosophila melanogaster GN=CG3714 PE=2 SV=2)

HSP 1 Score: 231.106 bits (588), Expect = 6.070e-60
Identity = 109/185 (58.92%), Postives = 139/185 (75.14%), Query Frame = -2
Query:  295 ETLDALNKQGHEVDALGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERILCRHPFNESKRAYVVPQKVEELLKCYWPGSSDKRREDLPTLKDTRERCIKQLEQMRPDHMRRLNPTPYKVSVSAKLYDFIHFLWLNEAPVGEL 849
            +T+ +LN+QGH++D  GIGT+LVTC  Q ALGCV+KLVEIN QPRIKLS+DV KV++P  K +YRLY  +G+ L+D++   +EPPP VG+++LCRHPF ESKRAYV+P  VE L K YW   S K  + LPTL+  RE+    L+ +R DH R LNPTPYKV+VS  LY+FIH LWL  AP+GEL
Sbjct:  372 DTILSLNEQGHKIDCFGIGTHLVTCQRQPALGCVYKLVEINGQPRIKLSQDVEKVTMPGNKNAYRLYSADGHALIDLLQKVSEPPPAVGQKVLCRHPFQESKRAYVIPSHVESLYKVYW--KSGKICQQLPTLEQVREKVQISLKTLRNDHKRTLNPTPYKVAVSDNLYNFIHDLWLQNAPIGEL 554          
BLAST of CF833760 vs. ExPASy Swiss-Prot
Match: PNCB_CAEEL (Nicotinate phosphoribosyltransferase OS=Caenorhabditis elegans GN=Y54G2A.17 PE=2 SV=2)

HSP 1 Score: 197.978 bits (502), Expect = 5.694e-50
Identity = 97/188 (51.60%), Postives = 133/188 (70.74%), Query Frame = -2
Query:  292 ETLDALNKQGHEVDALGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERILCRHPFN-ESKRAYVVPQKVEELLKCYWPGSSDKRREDLPTLKDTRERCIKQLEQ-MRPDHMRRLNPTPYKVSVSAKLYDFIHFLWLNEAPVGELQ 849
            ET+ +LN Q HE++A G+GT+LVTC  Q ALGCV+KLV  + QP+IKLS+DV+K++IP KK+ YR++GK GY ++D+M  E+EP P+  ++ILCRHPF  ESKRA V   K+ +L   YW     +    LPTL + +E   + +   +R DH R LNPTPYKVSVS +LY F+H LWL  AP+G+L+
Sbjct:  378 ETIMSLNDQQHEINAFGVGTHLVTCQKQPALGCVYKLVAQSAQPKIKLSQDVTKITIPGKKKCYRIFGKNGYAILDLMMLEDEPEPQPNQQILCRHPFEVESKRALVNANKIIKLHNVYW--KDGEMITPLPTLNEIKEHVNESIRSTLRQDHRRYLNPTPYKVSVSERLYQFLHTLWLQNAPIGQLE 563          
BLAST of CF833760 vs. ExPASy Swiss-Prot
Match: PNCB_DICDI (Nicotinate phosphoribosyltransferase OS=Dictyostelium discoideum GN=naprt PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 9.713e-50
Identity = 93/192 (48.44%), Postives = 133/192 (69.27%), Query Frame = -2
Query:  292 TLDALNKQGHEVDALGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPLVDIMTGENE-------PPPKVGERILCRHPFNESKRAYVVPQKVEELLKCYWPGSSDKRREDLPTLKDTRERCIKQLEQMRPDHMRRLNPTPYKVSVSAKLYDFIHFLWLNEAPVGELQ 846
            T+ ALN+QGHE+D   IGT LVTC AQ ALGCV+KLVEIN  PRIKLS++ +K+++P +K +YRL+G EG+PLVD++  +N+         P+VG+++LC HPF E KR  V P ++E+L    +     +    LP L D RE C +Q+ ++R DH+R  NPTPYKVSV+ +L+D +H LWL+  P+ E++
Sbjct:  400 TIIALNRQGHEIDVFAIGTNLVTCQAQPALGCVYKLVEINGSPRIKLSQEANKITLPGRKTAYRLFGSEGHPLVDLLVDDNDMIKDGSKQIPQVGKKVLCLHPFEEQKRVIVTPVQIEKLHHIVF--EKGQLTMPLPALNDIREYCFQQISKVREDHLRNSNPTPYKVSVTKELFDTLHNLWLDSVPIKEMK 589          
BLAST of CF833760 vs. ExPASy Swiss-Prot
Match: PNCB_MOUSE (Nicotinate phosphoribosyltransferase OS=Mus musculus GN=Naprt1 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.081e-24
Identity = 63/163 (38.65%), Postives = 96/163 (58.90%), Query Frame = -2
Query:  346 LNKQGHEVDALGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERILCRHPFNESKRAYVVPQKVEELLKCYWPGSSDKRREDLPTLKDTRERCIKQLEQMRPDHMRRLNPTPYKVSVSAKL 834
            L ++G EV+ +GIGT +VTC  Q ++GCV+KLV +  QPRIKL+ED  K ++P  K ++R  G +G  L+D++    EPPPK G+ +    P    +   V P +VE LL+ Y      +  E LP+L ++R    + L  +RP H +  +P  Y V++S KL
Sbjct:  366 LAQKGSEVNVIGIGTSVVTCPKQPSMGCVYKLVSVGGQPRIKLTEDPEKQTLPGSKAAFRFLGPDGSLLLDLLQLAEEPPPKAGQELRV-WPRGTQEPCTVKPAQVEPLLRLYL--QQGQLCEPLPSLDESRRFAQQSLSLLRPAHKQLQSPAVYPVALSEKL 525          
BLAST of CF833760 vs. ExPASy Swiss-Prot
Match: PNCB_HUMAN (Nicotinate phosphoribosyltransferase OS=Homo sapiens GN=NAPRT1 PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 2.409e-24
Identity = 66/182 (36.26%), Postives = 105/182 (57.69%), Query Frame = -2
Query:  307 ETLDALNKQGHEVDALGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERILCRHPFNESKRAYVVPQKVEELLK-CYWPGSSDKRREDLPTLKDTRERCIKQLEQMRPDHMRRLNPTPYKVSVSAKLYDFIHFLWLNEAP 849
            E L  L ++G EV+ +GIGT +VTC  Q +LG V+KLV +  QPR+KL+ED  K ++P  K ++RL G +G PL+D++    EP P+ G+ +    P    +   V P +VE LL+ C   G   +  E LP+L ++R      L ++ P+H R  +P  Y+V +S +L   ++ L   ++P
Sbjct:  361 EALARLAQEGSEVNVIGIGTSVVTCPQQPSLGGVYKLVAVGGQPRMKLTEDPEKQTLPGSKAAFRLLGSDGSPLMDMLQLAEEPVPQAGQELRVWPP-GAQEPCTVRPAQVEPLLRLCLQQG---QLCEPLPSLAESRALAQLSLSRLSPEHRRLRSPAQYQVVLSERLQALVNSLCAGQSP 538          
BLAST of CF833760 vs. ExPASy Swiss-Prot
Match: PNCB_RAT (Nicotinate phosphoribosyltransferase OS=Rattus norvegicus GN=Naprt1 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.109e-24
Identity = 63/166 (37.95%), Postives = 98/166 (59.04%), Query Frame = -2
Query:  346 LDALNKQGHEVDALGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERILCRHPFNESKRAYVVPQKVEELLKCYWPGSSDKRREDLPTLKDTRERCIKQLEQMRPDHMRRLNPTPYKVSVSAKL 843
            L  L ++G EV+ +GIGT +VTC  Q ++GCV+KLV +  QPRIKL+E+  K ++P  K ++R    EG  L+D++    EPPPK G+ +         +   V P +VE LL+ Y      +  E LP+L+++R    + L ++RP H +  NP  Y+V++S KL
Sbjct:  363 LARLAQKGSEVNVIGIGTNVVTCPKQPSMGCVYKLVSVGGQPRIKLTEESQKETLPGSKAAFRFLVSEGSLLLDLLQLAEEPPPKAGQELRVWLQ-GAQEPCTVKPAQVEPLLRLYL--QQGQPYEPLPSLEESRAFAQQSLSRLRPAHKQLQNPAVYQVALSEKL 525          
BLAST of CF833760 vs. ExPASy Swiss-Prot
Match: PNCB_BOVIN (Nicotinate phosphoribosyltransferase OS=Bos taurus GN=NAPRT1 PE=2 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 4.109e-24
Identity = 64/168 (38.10%), Postives = 98/168 (58.33%), Query Frame = -2
Query:  346 ETLDALNKQGHEVDALGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERILCRHPFNESKRAYVVPQKVEELLKCYWPGSSDKRREDLPTLKDTRERCIKQLEQMRPDHMRRLNPTPYKVSVSAKL 849
            E L  L ++G EV+ +GIGT +VTC  Q +LGCV+KLV +  QPR+KL+ED  K ++P  K ++RL G +G  L+D++    EPPP+ G+ +    P    +   V P  VE LL+ +      +  E LP+L ++R    + L ++ P H R   P  Y+V++S KL
Sbjct:  361 EELARLAQKGSEVNVIGIGTSVVTCPRQPSLGCVYKLVSVGGQPRMKLTEDPEKQTLPGSKAAFRLLGSDGSLLLDVLQLAEEPPPQAGQELRV-WPRGARESRTVRPAHVEPLLRLW--VQQGQLCEPLPSLAESRAFAQQSLHRLSPAHRRLEQPALYQVALSEKL 525          
BLAST of CF833760 vs. ExPASy Swiss-Prot
Match: PNCB_DANRE (Nicotinate phosphoribosyltransferase OS=Danio rerio GN=naprt1 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.561e-23
Identity = 60/173 (34.68%), Postives = 99/173 (57.23%), Query Frame = -2
Query:  334 ETLDALNKQGHEVDALGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERILCRHPF-NESKRAYVVPQKVEELLKCYWPGSSDKRREDLPTLKDTRERCIKQLEQMRPDHMRRLNPTPYKVSVSAKLYDFI 849
            ++L  LNK+ +E+D +G+GT+LVTC  Q +LGCV+KLVE+  +PR+KLSED  K ++P +K  YRL   +G+P +D++   +E  P  G  + C     N + +  + P +V  L    +  S  +    L +  ++RER    L+ + P H R   P  Y V++S +L+  +
Sbjct:  359 QSLSELNKKDNEIDVVGVGTHLVTCTRQPSLGCVYKLVEVRGRPRMKLSEDPEKSTLPGRKAVYRLLDADGHPQMDVLCLCDEAAPAAGVELQCFSLLGNSTLQCSITPAQVSSLRTQVF--SCGQITLPLNSASESRERAQISLQMLNPYHKRLQEPHNYTVALSERLHSLV 529          
The following BLAST results are available for this feature:
BLAST of CF833760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
PNCB_DROME6.070e-6058.92Nicotinate phosphoribosyltransferase OS=Drosophila... [more]
PNCB_CAEEL5.694e-5051.60Nicotinate phosphoribosyltransferase OS=Caenorhabd... [more]
PNCB_DICDI9.713e-5048.44Nicotinate phosphoribosyltransferase OS=Dictyostel... [more]
PNCB_MOUSE1.081e-2438.65Nicotinate phosphoribosyltransferase OS=Mus muscul... [more]
PNCB_HUMAN2.409e-2436.26Nicotinate phosphoribosyltransferase OS=Homo sapie... [more]
PNCB_RAT4.109e-2437.95Nicotinate phosphoribosyltransferase OS=Rattus nor... [more]
PNCB_BOVIN4.109e-2438.10Nicotinate phosphoribosyltransferase OS=Bos taurus... [more]
PNCB_DANRE1.561e-2334.68Nicotinate phosphoribosyltransferase OS=Danio reri... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_04D09_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833760 ID=CF833760; Name=CF833760; organism=Citrus sinensis; type=EST; length=850bp
CCCGGGCGGGCCCCTCAGTTTTTTTTTTTTTTTTATCCAACAGCATTAAA
AATCAATAATAGTTGCCATGACAAGGACAAGAAATGGAACGGATGGGGAA
AAAAAACCATTGAATTATAATAGTAAACAAATCAAAATCATGGTTCCTGT
AACGTTCAAATTACATTATTATTATATGAAGTGAACTTATGTATGCCTTT
GACTATTTGAAGAAGCTCCTCCAATTCTGATGGAATCATTACTTGCAAAT
TTGTACATCATTCAATGCCATTTATCTTCATTCCTACCTTATTGCAACTC
CCCAACAGGTGCCTCGTTGAGCCAGAGGAAATGAATGAAGTCATACAATT
TGGCACTGACACTAACCTTGTAAGGTGTTGGGTTCAGTCTCCTCATGTGA
TCAGGCCGCATTTGCTCTAACTGTTTGATACAACGCTCTCTTGTGTCCTT
GAGAGTTGGTAAATCTTCTCTTCTCTTATCTGAGCTCCCTGGCCAGTAAC
ACTTCAGGAGCTCTTCGACTTTCTGTGGCACCACATATGCTCTCTTTGAT
TCATTGAAAGGGTGACGACACAAAATTCGTTCTCCCACCTTTGGAGGTGG
TTCATTTTCTCCAGTCATTATGTCCACAAGGGGGTAACCTTCTTTGCCAT
ACAATCTGTAAGACCGTTTCTTACATGGTATAGAGACCTTTGAAACATCT
TCAGAGAGTTTGATGCGAGGCTGCTTATTTATCTCCACAAGCTTGAAAAC
ACAGCCTAAAGCAGCCTGAGCATAGCAAGTGACCAGATAGGTTCCTATTC
CCAATGCATCTACCTCATGACCCTGTTTGTTTAAAGCATCTAAAGTTTCC
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