CF833791

Overview
NameCF833791
Unique NameCF833791
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig453 contig Csv1_Contig453:598..1447. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF833791 vs. ExPASy Swiss-Prot
Match: CCB12_ORYSJ (Cyclin-B1-2 OS=Oryza sativa subsp. japonica GN=CYCB1-2 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.746e-12
Identity = 45/107 (42.06%), Postives = 60/107 (56.07%), Query Frame = -3 
Query:  528 AAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPXXXXXXXXXXXXALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 848
            AA EE+VL+E P      P  ++     + ++ +      NF        +RIQP            +LKDDGTSMGK Y LGGP+I+TVH+LAELMY+TI E+P Y
Sbjct:  286 AAGEESVLKEFP-----EPLRLL-----ISHRQSMGTCILNFH-------SRIQPVYVVDVAAAIVNSLKDDGTSMGKSYGLGGPEIYTVHDLAELMYETICEWPRY 375
The following BLAST results are available for this feature:
BLAST of CF833791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CCB12_ORYSJ2.746e-1242.06Cyclin-B1-2 OS=Oryza sativa subsp. japonica GN=CYC... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_04E08_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833791 ID=CF833791; Name=CF833791; organism=Citrus sinensis; type=EST; length=850bp
TTTTTTTTTTTTTTTTTAATCGCTAATGCTTCAATTGTTATTTACTGATC
ATCTACCCAGCTTATTCGATGAATCCAGATGATTATGAATTTTTTCTCAT
GAGAGAAACAAACAAAAGTGTTTGCACTCATAGGTCTTTTCACGGTCTTA
GGGAAATGAAAATTAAACGTACCATTCCCATATTTCCAAATAGATGGTAT
TTTCTGACAAACAATTGAAAATAGAATAGCCAAAGAAGATCATGGCCAAG
CTTCCGGATTTATTCTTTCGCTGACGGTAGAACCAAATTTTGGGCCACCC
TTACGATACCAGATAAGATATTCAGTTGGGTATCCCTTCAACTTATGTGG
CACAATTCCCAGATCCTGAAATGTTAAGGCATTGTCTGACACAATTGTAT
CTGAAGTATAGGCATTAATCTCATCCAGATTGAATAAGCCAGGACGGGGC
AACGGAAAGGGAACCTTTTTAAGTAATATCTCCCGAGGCATAGCAACCGC
CTTTGCAACAGGGAAAGGAACTTTCACATAGTGAGGATATTCACGGATTG
TATCATACATAAGCTCTGCCAATTCATGCACTGTAAAGATATCTGGACCA
CCCAACTCGTAAATTTTTCCCATGCTGGTTCCATCATCTTTTAACGCTGC
AGTGACTGCAGCAGCAACATCAACAACATATACAGGTTGGATTCTGGTAG
ATCCATCCCCAAAAAGAGGAAAAAAATTAAATTTTTTCACAAACTGTGCC
CACTTATTCAAAAGCCGATCCTCGGTACCAATCATTGCAGCAGGCCTCAT
AATTGTGGCCCAAGGTAATTCTCTCAAAACAGCTTCCTCAGCAGCAGCTT
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