CF833809

Overview
NameCF833809
Unique NameCF833809
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length726
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9291 contig Csv1_Contig9291:646..1371. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF833809 vs. ExPASy Swiss-Prot
Match: CHS2_CITSI (Chalcone synthase 2 OS=Citrus sinensis GN=CHS2 PE=2 SV=1)

HSP 1 Score: 340.117 bits (871), Expect = 7.115e-93
Identity = 173/192 (90.10%), Postives = 176/192 (91.67%), Query Frame = -3
Query:  146 GPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEALAPLGISDWN*IFWIAHPGGPAILDQVESKMGLKGEKLKATRQVLSEYGNMSSACVLFILDDMRKKSVEEAKAPPGEGLDWGVLLGFGPGLTVETVVLHSVPIQA 721
            GPADTHLDSLVGQALF           DPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEA APLGISDWN IFWIAHPGGPAILDQVESK+GLKGEKLKATRQVLSEYGNMSSACVLFILD+MRKKSVEEAKA  GEGLDWGVL GFGPGLTVETVVLHSVPI+A
Sbjct:  200 GPADTHLDSLVGQALFGDGAAAVIVGADPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESKLGLKGEKLKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKA 391          
BLAST of CF833809 vs. ExPASy Swiss-Prot
Match: CHS1_RUTGR (Chalcone synthase 1 OS=Ruta graveolens GN=CHS1 PE=2 SV=1)

HSP 1 Score: 313.923 bits (803), Expect = 5.460e-85
Identity = 157/192 (81.77%), Postives = 166/192 (86.46%), Query Frame = -3
Query:  146 GPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEALAPLGISDWN*IFWIAHPGGPAILDQVESKMGLKGEKLKATRQVLSEYGNMSSACVLFILDDMRKKSVEEAKAPPGEGLDWGVLLGFGPGLTVETVVLHSVPIQA 721
            GPADTHLDSLVGQALF           DPD S+ERPLYQLVS +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EA  P+GISDWN IFWIAHPGGPAILDQVE+K+GLK EKL+ATRQVLSEYGNMSSACVLFILD+MRK   EE +A  GEGLDWGVL GFGPGLTVETVVL SVPI+A
Sbjct:  202 GPADTHLDSLVGQALFGDGAAAVIVGADPDESIERPLYQLVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLKEAFGPIGISDWNSIFWIAHPGGPAILDQVEAKLGLKEEKLRATRQVLSEYGNMSSACVLFILDEMRKNCAEEGRATTGEGLDWGVLFGFGPGLTVETVVLRSVPIKA 393          
BLAST of CF833809 vs. ExPASy Swiss-Prot
Match: CHS2_RUTGR (Chalcone synthase 2 OS=Ruta graveolens GN=CHS2 PE=2 SV=1)

HSP 1 Score: 313.538 bits (802), Expect = 7.132e-85
Identity = 157/192 (81.77%), Postives = 166/192 (86.46%), Query Frame = -3
Query:  146 GPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEALAPLGISDWN*IFWIAHPGGPAILDQVESKMGLKGEKLKATRQVLSEYGNMSSACVLFILDDMRKKSVEEAKAPPGEGLDWGVLLGFGPGLTVETVVLHSVPIQA 721
            GPADTHLDSLVGQALF           DP+ S+ERPLYQLVS +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EA  P+GISDWN IFWIAHPGGPAILDQVE+K+GLK EKL+ATRQVLSEYGNMSSACVLFILD+MRKK  EE +A  GEGLDWGVL GFGPGLTVETVVL SVPI A
Sbjct:  202 GPADTHLDSLVGQALFGDGAAAVIVGADPNESIERPLYQLVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLKEAFGPIGISDWNSIFWIAHPGGPAILDQVEAKLGLKEEKLRATRQVLSEYGNMSSACVLFILDEMRKKCAEEGRATTGEGLDWGVLFGFGPGLTVETVVLRSVPINA 393          
BLAST of CF833809 vs. ExPASy Swiss-Prot
Match: CHSY_PETCR (Chalcone synthase OS=Petroselinum crispum GN=CHS PE=3 SV=1)

HSP 1 Score: 311.612 bits (797), Expect = 2.710e-84
Identity = 153/189 (80.95%), Postives = 166/189 (87.83%), Query Frame = -3
Query:  155 GPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEALAPLGISDWN*IFWIAHPGGPAILDQVESKMGLKGEKLKATRQVLSEYGNMSSACVLFILDDMRKKSVEEAKAPPGEGLDWGVLLGFGPGLTVETVVLHSVP 721
            GP+D+HLDSLVGQALF           DPD SVERPL+QL+S +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EA  P+GISDWN +FWIAHPGGPAILDQVE K+GLK EK++ATRQVLS+YGNMSSACVLFILD+MRKKS+EE KA  GEGLDWGVL GFGPGLTVETVVLHSVP
Sbjct:  205 GPSDSHLDSLVGQALFGDGAAAVILGSDPDLSVERPLFQLISAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLKEAFGPIGISDWNSLFWIAHPGGPAILDQVELKLGLKEEKMRATRQVLSDYGNMSSACVLFILDEMRKKSIEEGKATTGEGLDWGVLFGFGPGLTVETVVLHSVP 393          
BLAST of CF833809 vs. ExPASy Swiss-Prot
Match: CHS2_DAUCA (Chalcone synthase 2 OS=Daucus carota GN=CHS2 PE=2 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 6.037e-84
Identity = 152/189 (80.42%), Postives = 166/189 (87.83%), Query Frame = -3
Query:  155 GPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEALAPLGISDWN*IFWIAHPGGPAILDQVESKMGLKGEKLKATRQVLSEYGNMSSACVLFILDDMRKKSVEEAKAPPGEGLDWGVLLGFGPGLTVETVVLHSVP 721
            GP+D+HLDSLVGQALF           DPD SVERPL+QL+S +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EA  P+GISDWN +FWIAHPGGPAILDQVE K+GLK EK++ATRQVLS+YGNMSSACVLFILD+MRKKS+EE KA  G+GLDWGVL GFGPGLTVETVVLHSVP
Sbjct:  204 GPSDSHLDSLVGQALFGDGAAAVIVGSDPDLSVERPLFQLISAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLKEAFGPIGISDWNSLFWIAHPGGPAILDQVELKLGLKEEKMRATRQVLSDYGNMSSACVLFILDEMRKKSIEEGKATTGDGLDWGVLFGFGPGLTVETVVLHSVP 392          
BLAST of CF833809 vs. ExPASy Swiss-Prot
Match: CHSY_BETVE (Chalcone synthase OS=Betula verrucosa GN=CHS PE=2 SV=2)

HSP 1 Score: 309.686 bits (792), Expect = 1.030e-83
Identity = 152/190 (80.00%), Postives = 166/190 (87.37%), Query Frame = -3
Query:  152 GPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEALAPLGISDWN*IFWIAHPGGPAILDQVESKMGLKGEKLKATRQVLSEYGNMSSACVLFILDDMRKKSVEEAKAPPGEGLDWGVLLGFGPGLTVETVVLHSVPI 721
            GP DTHLDSLVGQALF           DPDTSVERPL++L+S +QTILPDSDGAIDGHLREVGLTFHLLKDVPG+ISKNIEKSL+EA APLGISDWN +FWIAHPGGPAILDQVESK+GLK EKL+ATR VLSEYGNMSSACVLFILD+MR+ S+E  K   GEGL+WGVL GFGPGLTVETVVLHSVP+
Sbjct:  200 GPTDTHLDSLVGQALFGDGAAAVIVGADPDTSVERPLFELISAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGIISKNIEKSLAEAFAPLGISDWNSLFWIAHPGGPAILDQVESKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRRNSLEGGKVTTGEGLEWGVLFGFGPGLTVETVVLHSVPV 389          
BLAST of CF833809 vs. ExPASy Swiss-Prot
Match: CHS3_RUTGR (Chalcone synthase 3 OS=Ruta graveolens GN=CHS3 PE=2 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 1.139e-82
Identity = 154/192 (80.21%), Postives = 162/192 (84.38%), Query Frame = -3
Query:  146 GPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEALAPLGISDWN*IFWIAHPGGPAILDQVESKMGLKGEKLKATRQVLSEYGNMSSACVLFILDDMRKKSVEEAKAPPGEGLDWGVLLGFGPGLTVETVVLHSVPIQA 721
            GP DTHLDSLVGQALF           DPD S+ERPLYQLVS +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EA  P+GISDWN IFWIAHPGGPAILDQVE K+ LK EKL+ATR VLSEYGNMSSACVLFILD+MRKK  EE  A  GEGL+WGVL GFGPGLTVETVVL SVPI+A
Sbjct:  202 GPVDTHLDSLVGQALFGDGAAAVIVGADPDESIERPLYQLVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLKEAFGPIGISDWNSIFWIAHPGGPAILDQVEEKLELKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKCAEEGMATTGEGLEWGVLFGFGPGLTVETVVLRSVPIKA 393          
BLAST of CF833809 vs. ExPASy Swiss-Prot
Match: CHSY_VITVI (Chalcone synthase OS=Vitis vinifera GN=CHS PE=2 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.644e-81
Identity = 150/192 (78.12%), Postives = 163/192 (84.90%), Query Frame = -3
Query:  146 GPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEALAPLGISDWN*IFWIAHPGGPAILDQVESKMGLKGEKLKATRQVLSEYGNMSSACVLFILDDMRKKSVEEAKAPPGEGLDWGVLLGFGPGLTVETVVLHSVPIQA 721
            GP+DTHLDSLVGQALF           DPDT +E PL++LVS +QTILPDS+GAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EA  P+GISDWN +FWIAHPGGPAILDQVE K+GLK EKL+ATR VLSEYGNMSSACVLFILD+MRKKS+EE K   GEGL+WGVL GFGPGLTVETVVLHSV   A
Sbjct:  200 GPSDTHLDSLVGQALFGDGAAAVIIGADPDTKIELPLFELVSAAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFTPIGISDWNSLFWIAHPGGPAILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWGVLFGFGPGLTVETVVLHSVSAPA 391          
BLAST of CF833809 vs. ExPASy Swiss-Prot
Match: CHSY_ARAAL (Chalcone synthase OS=Arabis alpina GN=CHS PE=3 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 4.784e-81
Identity = 149/191 (78.01%), Postives = 165/191 (86.39%), Query Frame = -3
Query:  152 GPADTHLDSLVGQALFXXXXXXXXXXXDPDTSV-ERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEALAPLGISDWN*IFWIAHPGGPAILDQVESKMGLKGEKLKATRQVLSEYGNMSSACVLFILDDMRKKSVEEAKAPPGEGLDWGVLLGFGPGLTVETVVLHSVPI 721
            GP+DTHLDSLVGQALF           DPDTSV E+P++++VS +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EA  PLGISDWN +FWIAHPGGPAILDQVE K+GLK EK++ATR VLSEYGNMSSACVLFILD+MRKKS ++  A  GEGL+WGVL GFGPGLTVETVVLHSVP+
Sbjct:  201 GPSDTHLDSLVGQALFSDGAAALIVGSDPDTSVGEKPIFEMVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLDEAFKPLGISDWNSLFWIAHPGGPAILDQVEIKLGLKAEKMRATRHVLSEYGNMSSACVLFILDEMRKKSAKDGAATTGEGLEWGVLFGFGPGLTVETVVLHSVPL 391          
BLAST of CF833809 vs. ExPASy Swiss-Prot
Match: CHSY_ANTMA (Chalcone synthase OS=Antirrhinum majus GN=CHS PE=3 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 1.392e-80
Identity = 148/190 (77.89%), Postives = 161/190 (84.74%), Query Frame = -3
Query:  152 GPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEALAPLGISDWN*IFWIAHPGGPAILDQVESKMGLKGEKLKATRQVLSEYGNMSSACVLFILDDMRKKSVEEAKAPPGEGLDWGVLLGFGPGLTVETVVLHSVPI 721
            GPADTHLDSLVGQALF           DP   VERPL+Q+V+ +QT+LPDS GAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EA  PLGISDWN +FWIAHPGGPAILDQVE K+GLK EKL++TRQVLSEYGNMSSACVLFILD+MRK S +E  +  GEGLDWGVL GFGPGLTVETVVLHSVP+
Sbjct:  200 GPADTHLDSLVGQALFGDGAAAVIVGSDPVVGVERPLFQIVTAAQTLLPDSHGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLKEAFDPLGISDWNSVFWIAHPGGPAILDQVEEKLGLKPEKLRSTRQVLSEYGNMSSACVLFILDEMRKSSAKEGMSTTGEGLDWGVLFGFGPGLTVETVVLHSVPL 389          
The following BLAST results are available for this feature:
BLAST of CF833809 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 147
Match NameE-valueIdentityDescription
CHS2_CITSI7.115e-9390.10Chalcone synthase 2 OS=Citrus sinensis GN=CHS2 PE=... [more]
CHS1_RUTGR5.460e-8581.77Chalcone synthase 1 OS=Ruta graveolens GN=CHS1 PE=... [more]
CHS2_RUTGR7.132e-8581.77Chalcone synthase 2 OS=Ruta graveolens GN=CHS2 PE=... [more]
CHSY_PETCR2.710e-8480.95Chalcone synthase OS=Petroselinum crispum GN=CHS P... [more]
CHS2_DAUCA6.037e-8480.42Chalcone synthase 2 OS=Daucus carota GN=CHS2 PE=2 ... [more]
CHSY_BETVE1.030e-8380.00Chalcone synthase OS=Betula verrucosa GN=CHS PE=2 ... [more]
CHS3_RUTGR1.139e-8280.21Chalcone synthase 3 OS=Ruta graveolens GN=CHS3 PE=... [more]
CHSY_VITVI1.644e-8178.13Chalcone synthase OS=Vitis vinifera GN=CHS PE=2 SV... [more]
CHSY_ARAAL4.784e-8178.01Chalcone synthase OS=Arabis alpina GN=CHS PE=3 SV=... [more]
CHSY_ANTMA1.392e-8077.89Chalcone synthase OS=Antirrhinum majus GN=CHS PE=3... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04E24_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04E24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833809 ID=CF833809; Name=CF833809; organism=Citrus sinensis; type=EST; length=726bp
GGTGAGGTCATAAGATAAAAGGCTCGATGCCTTAAAGTCAATTGACAAAA
CTAAACCTTCGCACGATCAACCAATAACTCAACTGTGAAAGCATACAACA
TAAAGTTACTGAACTACTACACATACTGATGGAGCTCTCAGTTCAAGCTT
GGATGGGGACACTGTGCAACACAACGGTCTCGACGGTGAGCCCCGGCCCG
AACCCTAACAACACACCCCAATCGAGCCCTTCCCCGGGGGGGGCTTTCGC
TTCCTCAACAGACTTCTTTCTCATATCGTCAAGGATGAACAAGACACAAG
CGCTTGACATGTTACCGTACTCACTCAACACTTGACGTGTGGCCTTCAGC
TTCTCCCCTTTGAGGCCCATTTTAGACTCCACTTGGTCCAGAATTGCGGG
CCCACCGGGGTGAGCGATCCAGAATATCTAGTTCCAGTCGCTGATGCCAA
GCGGGGCTAACGCTTCAGACAGGCTTTTCTCTATATTCTTTGAGATCAAG
CCGGGGACGTCTTTAAGCAAATGGAAAGTGAGACCGACTTCGCGCAAGTG
TCCGTCAATTGCACCGTCAGAGTCAGGGAGGATCGTCTGCGAAGTCGACA
CGAGCTGATACAACGGACGCTCGACCGACGTGTCAGGATCGGCACCCACT
ATCACAGCAGCAGCACCATCACCGAACAAAGCCTGGCCCACTAGAGAATC
AAGATGAGTATCGGCAGGGCCGCAGA
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