CF833905

Overview
NameCF833905
Unique NameCF833905
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1050 contig Csv1_Contig1050:367..996. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF833905 vs. ExPASy Swiss-Prot
Match: ASO_TOBAC (L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE=2 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.008e-62
Identity = 110/174 (63.22%), Postives = 131/174 (75.29%), Query Frame = -2
Query:  108 GSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHTGMGVVLALGVETVGNIPNQALACGLTGKRFMNPKQN 629
            GSI+YG+ +AFD   PP+NF  +YDV+K   N+N+T G+GVYML  NTT+D+ILQNANA+  ++SE HPWHLHGHDFWVLG GEGKF+++D            NTAVIFP+GWTALRFV DNPG WAFHCHIEPH H GMGV+ A GV  V  IP +ALACGLTGK  M+ K N
Sbjct:  406 GSIRYGI-NAFDTKPPPDNFPKDYDVLKQAPNSNSTYGNGVYMLKFNTTIDIILQNANALAKDVSEIHPWHLHGHDFWVLGYGEGKFSEKDVKKFNLKNPPLRNTAVIFPFGWTALRFVTDNPGVWAFHCHIEPHLHMGMGVIFAEGVHLVKKIPKEALACGLTGKMLMSNKHN 578          
BLAST of CF833905 vs. ExPASy Swiss-Prot
Match: ASO_CUCPM (L-ascorbate oxidase OS=Cucurbita pepo var. melopepo PE=1 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 5.003e-62
Identity = 109/174 (62.64%), Postives = 125/174 (71.84%), Query Frame = -2
Query:  108 GSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHTGMGVVLALGVETVGNIPNQALACGLTGKRFMNPKQN 629
            G++KY L  AFDQN PPE F  +YD+  PP N  T +G+GVY   +   VDVILQNAN ++ NLSETHPWHLHGHDFWVLG G+GKF+ E+E           NT VIFPYGWTA+RFVADNPG WAFHCHIEPH H GMGVV A GVE VG IP +ALACG T K  +N  +N
Sbjct:  378 GAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVEKVGRIPTKALACGGTAKSLINNPKN 551          
BLAST of CF833905 vs. ExPASy Swiss-Prot
Match: ASO_CUCMA (L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=1 SV=2)

HSP 1 Score: 233.032 bits (593), Expect = 9.435e-61
Identity = 107/170 (62.94%), Postives = 122/170 (71.76%), Query Frame = -2
Query:  120 GSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHTGMGVVLALGVETVGNIPNQALACGLTGKRFMN 629
            G++K+ L  AFDQN PPE F  +YD+  PP N  T +G+GVY   +   VDVILQNAN ++ NLSE HPWHLHGHDFWVLG G+GKFT E+E           NT VIFPYGWTA+RFVADNPG WAFHCHIEPH H GMGVV A GVE VG IP +ALACG T K  +N
Sbjct:  408 GAMKFNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTKIGNGVYQFKIGEIVDVILQNANMMKENLSEIHPWHLHGHDFWVLGYGDGKFTAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVEKVGRIPTKALACGGTAKSLIN 577          
BLAST of CF833905 vs. ExPASy Swiss-Prot
Match: ASO_CUCSA (L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 2.841e-57
Identity = 105/164 (64.02%), Postives = 115/164 (70.12%), Query Frame = -2
Query:  138 SIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKF-TKEDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHTGMGVVLALGVETVGNIPNQALACGLT 626
            ++K  L  AF+QN PPE F   YD+  PP N  TT G+GVY   +  TVDVILQNAN + PN+SE HPWHLHGHDFWVLG GEGKF   EDE           NT VIFPYGWTA+RFVADNPG WAFHCHIEPH H GMGVV A GV  VG IP +ALACG T
Sbjct:  414 AMKMRLNTAFNQNPPPETFPLNYDINNPPPNPETTTGNGVYKFNMGETVDVILQNANMLNPNMSEIHPWHLHGHDFWVLGYGEGKFYAPEDEKKLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVHMVGMIPPKALACGST 577          
BLAST of CF833905 vs. ExPASy Swiss-Prot
Match: LAC16_ARATH (Laccase-16 OS=Arabidopsis thaliana GN=LAC16 PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 1.739e-22
Identity = 62/147 (42.18%), Postives = 81/147 (55.10%), Query Frame = -2
Query:  153 PENFSNEYDVMKPP---VNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPYG-WTALRFVADNPGAWAFHCHIEPHFHTGMGVVLALGVETVGNIPNQAL 581
            P   SN YD   P    VNA T  G+ +Y L  N TV ++LQN   I   LS+ HP+HLHG +F+ +GRG G F  E +              V  P G WTA+RF+ADNPG W  HCH+E   HT  G+ +A  V+  G+ P+Q+L
Sbjct:  416 PAKPSNPYDYTAPVKLGVNAATMKGTKLYRLPYNATVQIVLQNTAMI---LSDNHPFHLHGFNFFEVGRGLGNFNPEKDPKAFNLVDPVERNTVGVPAGGWTAIRFIADNPGVWFMHCHLE--LHTTWGLKMAFVVDN-GHGPDQSL 556          
BLAST of CF833905 vs. ExPASy Swiss-Prot
Match: LAC11_ORYSJ (Putative laccase-11 OS=Oryza sativa subsp. japonica GN=LAC11 PE=5 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 3.627e-20
Identity = 50/132 (37.88%), Postives = 72/132 (54.55%), Query Frame = -2
Query:  153 PPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPY-GWTALRFVADNPGAWAFHCHIEPHFHTGMGVVLALGVETVGNIPNQAL 545
            PP N   T G+ V  L  NTTV+V+LQ+ + +    +E+HP HLHG+DF+V+G G G +   ++              +  P  GW A+RFVADNPG W  HCH++ H   G+ +   +     G +PNQ L
Sbjct:  404 PPNNTFVTHGTRVVPLSFNTTVEVVLQDTSILG---AESHPLHLHGYDFYVVGTGFGNYDASNDTAKYNLVDPVQRNTISVPTAGWVAIRFVADNPGVWIMHCHLDVHLSWGLSMAWLV---NDGPLPNQKL 529          
BLAST of CF833905 vs. ExPASy Swiss-Prot
Match: LAC10_ARATH (Laccase-10 OS=Arabidopsis thaliana GN=LAC10 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.378e-19
Identity = 55/133 (41.35%), Postives = 74/133 (55.64%), Query Frame = -2
Query:  153 KPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKF-TKEDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHTGMGVVLALGVETVGNIPNQAL 548
            KPP N  T   + +Y L  N+TV V+LQ+   + P   E HP HLHG +F+V+G G G + +K+D            NT  +   GW A+RF ADNPG W  HCH+E   HT  G+ +A  VE  G  PNQ++
Sbjct:  422 KPPSNLATMKATKLYKLPYNSTVQVVLQDTGNVAP---ENHPIHLHGFNFFVVGLGTGNYNSKKDSNKFNLVDPVERNTVGVPSGGWAAIRFRADNPGVWFMHCHLE--VHTTWGLKMAFLVEN-GKGPNQSI 548          
BLAST of CF833905 vs. ExPASy Swiss-Prot
Match: LAC2_ORYSJ (Laccase-2 OS=Oryza sativa subsp. japonica GN=LAC2 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.237e-19
Identity = 57/159 (35.85%), Postives = 85/159 (53.46%), Query Frame = -2
Query:  153 YGLKDAFDQN---GPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPYG-WTALRFVADNPGAWAFHCHIEPHFHTGMGVVLALGVETVGNIPNQAL 617
            YG K  F  +    PP  F+  Y  +       T+LG+ +  +  N TV+++LQ+ N +     E+HP+HLHG++F+V+GRG G F    +              V  P G WTA+RF ADNPG W  HCH+E   HT  G+ +A  VE  G+ P++++
Sbjct:  402 YGQKGVFAADFPDRPPARFN--YTGVPLTAGLGTSLGTRLSKIAYNATVELVLQDTNLLSV---ESHPFHLHGYNFFVVGRGVGNFDPAKDPAKYNLVDPPERNTVGVPAGGWTAIRFRADNPGVWFLHCHLE--VHTSWGLKMAFLVED-GSGPDESV 552          
BLAST of CF833905 vs. ExPASy Swiss-Prot
Match: LAC7_ORYSJ (Laccase-7 OS=Oryza sativa subsp. japonica GN=LAC7 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 8.934e-19
Identity = 49/133 (36.84%), Postives = 70/133 (52.63%), Query Frame = -2
Query:  192 NGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHTGMGVVLAL 590
            N  P  ++ ++     P       G+ V  L  N+TV+++LQN  A     SE HP HLHG +F+VL +G G FT  +            NT  +   GW  +RFVA+NPG W FHCH++ H   G+G+V A+
Sbjct:  410 NRTPGVYTADFPDAPQPSGTPMVEGTKVRRLKYNSTVEIVLQNPTAFP---SENHPIHLHGFNFFVLAQGLGNFTPGNVSGYNLVDPVSRNTLAVPTGGWAVIRFVANNPGMWFFHCHLDAHVPMGLGMVFAV 539          
BLAST of CF833905 vs. ExPASy Swiss-Prot
Match: LAC12_ARATH (Laccase-12 OS=Arabidopsis thaliana GN=LAC12 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.434e-18
Identity = 51/142 (35.92%), Postives = 72/142 (50.70%), Query Frame = -2
Query:  204 NGPPENFSNEYDVMKPPVNANTT------------LGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFT-KEDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHTGMGV 590
            NG P  F+ ++   KPPV  + T             G+ +Y L   + V V+LQ+ N +    SE HP HLHG+DF+++G G G F  K+D            NT  +   GW  +RFVADNPG W  HCH++ H   G+ +
Sbjct:  404 NGIPGVFTTDFP-SKPPVKFDYTGNNISRALFQPVKGTKLYKLKYGSRVQVVLQDTNIVT---SENHPIHLHGYDFYIVGEGFGNFNPKKDTSKFNLVDPPLRNTVAVPVNGWAVIRFVADNPGVWLMHCHLDVHIKWGLAM 541          
The following BLAST results are available for this feature:
BLAST of CF833905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
ASO_TOBAC1.008e-6263.22L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE... [more]
ASO_CUCPM5.003e-6262.64L-ascorbate oxidase OS=Cucurbita pepo var. melopep... [more]
ASO_CUCMA9.435e-6162.94L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=... [more]
ASO_CUCSA2.841e-5764.02L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1[more]
LAC16_ARATH1.739e-2242.18Laccase-16 OS=Arabidopsis thaliana GN=LAC16 PE=2 S... [more]
LAC11_ORYSJ3.627e-2037.88Putative laccase-11 OS=Oryza sativa subsp. japonic... [more]
LAC10_ARATH1.378e-1941.35Laccase-10 OS=Arabidopsis thaliana GN=LAC10 PE=2 S... [more]
LAC2_ORYSJ5.237e-1935.85Laccase-2 OS=Oryza sativa subsp. japonica GN=LAC2 ... [more]
LAC7_ORYSJ8.934e-1936.84Laccase-7 OS=Oryza sativa subsp. japonica GN=LAC7 ... [more]
LAC12_ARATH4.434e-1835.92Laccase-12 OS=Arabidopsis thaliana GN=LAC12 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04H23_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04H23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833905 ID=CF833905; Name=CF833905; organism=Citrus sinensis; type=EST; length=630bp
TTTTTTTTTTTCTTTTAAAGACAACTCCGAAATTTTATTGATATAAATAT
CAACCCAACAATAGAAACTCCAGGAATAAAGTACATAAAACAAACTAGCT
AGCCTCAATTTTGTTTAGGGTTCATGAACCTTTTCCCAGTCAAACCACAA
GCCAACGCCTGGTTTGGAATATTACCAACGGTTTCAACACCAAGAGCAAG
AACCACACCCATTCCAGTATGGAAATGGGGCTCAATATGGCAGTGAAATG
CCCAGGCACCTGGATTATCAGCAACAAATCTTAAAGCAGTCCAGCCATAT
GGGAATATCACCGCAGTATTTTTCAATGGGGGATTCTTCAAGTTAAATTT
CTTCTCATCTTCTTTCGTAAACTTCCCTTCTCCGCGCCCTAATACCCAAA
AATCATGCCCATGCAAATGCCAAGGGTGGGTTTCACTCAAGTTTGGCCTT
ATCGCGTTTGCATTTTGAAGTATAACATCAACTGTGGTGTTTAAACCAAG
CATGTAAACCCCACTTCCAAGAGTTGTATTAGCGTTTACAGGAGGTTTCA
TCACGTCATACTCATTCGAGAAGTTTTCGGGGGGACCATTCTGATCAAAA
GCATCTTTAAGACCATATTTGATGGATCCT
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