CF833910

Overview
NameCF833910
Unique NameCF833910
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length695
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF833910 vs. ExPASy Swiss-Prot
Match: SPE1_PEA (Arginine decarboxylase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.547e-17
Identity = 48/107 (44.86%), Postives = 58/107 (54.21%), Query Frame = -3 
Query:  385 RVMQHEPELMFETLKHRAEEYCGQEHXXXXXXXXXXXXXXGMXXXXXXXXXXAQYFHSMPYLVVPSSCSLTAINNGGGLYYCNGEDYDA----VVDSSPNEDEQWSY 693
            RVMQHEP+LMFETLKHRA E+CGQ                 +          AQ F +MPYLV  ++C L A+ N  G YYC+G+D+ A    V  S   EDE WSY
Sbjct:  634 RVMQHEPQLMFETLKHRALEFCGQH------------DDDSVVNAGVLANSLAQSFDNMPYLVSSTTCCLNALTNNNGFYYCSGDDFSADTVSVATSVAGEDENWSY 728
The following BLAST results are available for this feature:
BLAST of CF833910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
SPE1_PEA4.547e-1744.86Arginine decarboxylase OS=Pisum sativum PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_04I03_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04I03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833910 ID=CF833910; Name=CF833910; organism=Citrus sinensis; type=EST; length=695bp
TTTTTTTTTTTTTTTTTCAAAAGTAATCTATTTTTCAATTAACATACCGT
AGCTCAAAAGAATCAAATCAACAAAACCAAAAAGAGAATTGAGTTTAATC
TAAAAGCTCTGATTGAAGTCTACTAATGTTGACATAAAAAGAGGCCATGA
GATCCCGAATTTACAAAAGGGCGGATTCAGTACCCATCACTCCTCTTCTT
CACTAAAATTGCAAAAGACAACGTTCAACTGCTTCCATCTTTTGCAATGA
AAATCTAAAAATTAAAATAGACAATGAAATTAAAATTACGGAATAAAAAC
TTGCAACAAGACAAGCTCAAGGATTAGATGAAGCATTTCGATAGGGTGAC
AGGTGATACTAAGAATACACATCTAAGCATAGCAGTATGACCACTGCTCA
TCCTCATTTGGAGAAGAATCAACAACAGCATCGTAATCCTCCCCGTTGCA
ATAGTATAACCCACCACCATTATTGATAGCAGTCAAAGAACAAGAGGATG
GCACCACAAGATATGGCATGCTGTGAAAGTACTGAGCAAGGCTGCTAGCT
AAAGCAGAATTATTAGCCATGCCGTGATCGTAATCATCAGTATCACCATC
CCCACCATTACTACCATGCTCCTGTCCACAATATTCCTCAGCACGGTGTT
TGAGGGTCTCAAACATGAGCTCGGGCTCGTGCTGCATCACCCGGA
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