CF833936
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF833936 vs. ExPASy Swiss-Prot
Match: GCSH_FLAPR (Glycine cleavage system H protein, mitochondrial OS=Flaveria pringlei GN=GDCSH PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 3.396e-49 Identity = 97/158 (61.39%), Postives = 118/158 (74.68%), Query Frame = -2 Query: 285 LWASRAESYLRISV--------FHRGFSSVIKDLKYADSHEWVKVDGNCAAIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKDTSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNGGELKKLMDADQYTKFCEEEDSKH 734 +WAS + LR+S R FSSV+ LKYA+SHEWVK +G+ A IGITDHAQDHLG+VV+V+LPE G +V + FGAVESVK TSDVNSP+SG++VEVN +LS +P L+NSSPYEDGW+IKV+ N EL LM A +YTKFCEEEDS H Sbjct: 5 IWASSTANALRLSSATRPHFSPLSRCFSSVLDGLKYANSHEWVKHEGSVATIGITDHAQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLSETPGLINSSPYEDGWMIKVKPSNPSELDSLMGAKEYTKFCEEEDSAH 162
BLAST of CF833936 vs. ExPASy Swiss-Prot
Match: GCSH_FLAAN (Glycine cleavage system H protein, mitochondrial OS=Flaveria anomala GN=GDCSH PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 7.565e-49 Identity = 96/158 (60.76%), Postives = 118/158 (74.68%), Query Frame = -2 Query: 285 LWASRAESYLRISV--------FHRGFSSVIKDLKYADSHEWVKVDGNCAAIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKDTSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNGGELKKLMDADQYTKFCEEEDSKH 734 +WAS + LR+S R FSSV+ LKYA+SHEWVK +G+ A IGITDHAQDHLG+VV+V+LPE G +V + FGAVESVK TSDVNSP+SG++VEVN +LS +P L+NSSPYEDGW+IKV+ N EL LM A +YTKFCEEED+ H Sbjct: 5 MWASSTANALRLSSATRPHFSPLSRCFSSVLDGLKYANSHEWVKHEGSVATIGITDHAQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLSETPGLINSSPYEDGWMIKVKPSNPSELDSLMGAKEYTKFCEEEDAAH 162
BLAST of CF833936 vs. ExPASy Swiss-Prot
Match: GCSH_PEA (Glycine cleavage system H protein, mitochondrial OS=Pisum sativum GN=GDCSH PE=1 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.577e-46 Identity = 92/161 (57.14%), Postives = 117/161 (72.67%), Query Frame = -2 Query: 285 LWASRAESYLRISV-----------FHRGFSSVIKDLKYADSHEWVKVDGNCAAIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKDTSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNGGELKKLMDADQYTKFCEEEDSKH 734 +WAS + L++S R FS+V+ LKYA SHEWVK +G+ A IGITDHAQDHLG+VV+VELPE GV+V + FGAVESVK TSDVNSP+SG+V+EVN L+ P L+NSSPYEDGW+IK++ + EL+ L+ A +YTKFCEEED+ H Sbjct: 5 MWASSTANALKLSSSSRLHLSPTFSISRCFSNVLDGLKYAPSHEWVKHEGSVATIGITDHAQDHLGEVVFVELPEPGVSVTKGKGFGAVESVKATSDVNSPISGEVIEVNTGLTGKPGLINSSPYEDGWMIKIKPTSPDELESLLGAKEYTKFCEEEDAAH 165
BLAST of CF833936 vs. ExPASy Swiss-Prot
Match: GCSH_ORYSJ (Glycine cleavage system H protein, mitochondrial OS=Oryza sativa subsp. japonica GN=GDCSH PE=1 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 3.514e-46 Identity = 93/159 (58.49%), Postives = 115/159 (72.33%), Query Frame = -2 Query: 291 LWASRAESYLRISV-----------FHRGFSSVIKDLKYADSHEWVKVDGNCAAIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKDTSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNGGELKKLMDADQYTKFCEEEDS 734 LWAS A + L+IS R FS+V+ LKY+ SHEWVK DG+ A IGITDHAQ HLG+VV+VELPE G V Q +FG VESVK TSD+NSP+SG+VVEVN++LS +P L+NSSPYEDGW+IKV+ + EL L+D +YTK CEEED+ Sbjct: 5 LWASSAANALKISCSGATRAAPAYSISRYFSTVLDGLKYSSSHEWVKNDGSVATIGITDHAQGHLGEVVFVELPEAGAKVSQGGAFGNVESVKATSDINSPISGEVVEVNDKLSETPGLINSSPYEDGWMIKVKPSSPSELDALLDPAKYTKHCEEEDA 163
BLAST of CF833936 vs. ExPASy Swiss-Prot
Match: GCSH_ORYSI (Glycine cleavage system H protein, mitochondrial OS=Oryza sativa subsp. indica GN=GDCSH PE=2 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 3.514e-46 Identity = 93/159 (58.49%), Postives = 115/159 (72.33%), Query Frame = -2 Query: 291 LWASRAESYLRISV-----------FHRGFSSVIKDLKYADSHEWVKVDGNCAAIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKDTSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNGGELKKLMDADQYTKFCEEEDS 734 LWAS A + L+IS R FS+V+ LKY+ SHEWVK DG+ A IGITDHAQ HLG+VV+VELPE G V Q +FG VESVK TSD+NSP+SG+VVEVN++LS +P L+NSSPYEDGW+IKV+ + EL L+D +YTK CEEED+ Sbjct: 5 LWASSAANALKISCSGATRAAPAYSISRYFSTVLDGLKYSSSHEWVKNDGSVATIGITDHAQGHLGEVVFVELPEAGAKVSQGGAFGNVESVKATSDINSPISGEVVEVNDKLSETPGLINSSPYEDGWMIKVKPSSPSELDALLDPAKYTKHCEEEDA 163
BLAST of CF833936 vs. ExPASy Swiss-Prot
Match: GCSH2_ARATH (Probable glycine cleavage system H protein 2, mitochondrial OS=Arabidopsis thaliana GN=At1g32470 PE=1 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 3.514e-46 Identity = 91/162 (56.17%), Postives = 119/162 (73.46%), Query Frame = -2 Query: 285 LWASRAESYLRISV------------FHRGFSSVIKDLKYADSHEWVKVDGNCAAIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKDTSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNGGELKKLMDADQYTKFCEEEDSKH 734 +WAS + L++S R FSSV++ LKYA+SHEWVK +G+ A IGITDHAQDHLG+VV+VELPE +V ++ SFGAVESVK TS++ SP+SG+V+EVN +L+ SP L+NSSPYEDGW+IKV+ + EL+ LM +YTKFCEEED+ H Sbjct: 5 MWASSTANALKLSSSASKSHLLPAFSISRCFSSVLEGLKYANSHEWVKHEGSVATIGITDHAQDHLGEVVFVELPEANSSVSKEKSFGAVESVKATSEILSPISGEVIEVNTKLTESPGLINSSPYEDGWMIKVKPSSPAELEALMGPKEYTKFCEEEDAAH 166
BLAST of CF833936 vs. ExPASy Swiss-Prot
Match: GCSH1_ARATH (Glycine cleavage system H protein 1, mitochondrial OS=Arabidopsis thaliana GN=GDCSH PE=1 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 5.994e-46 Identity = 88/150 (58.67%), Postives = 119/150 (79.33%), Query Frame = -2 Query: 285 LWASRAESYLRISVFHRGFSSVIKDLKYADSHEWVKVDGNCAAIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKDTSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNGGELKKLMDADQYTKFCEEEDSKH 734 L +S ++S+L F R FS+V++ LKYA+SHEWVK +G+ A IGIT HAQDHLG+VV+VELPE +V ++ SFGAVESVK TS++ SP+SG+++EVN++L+ SP L+NSSPYEDGW+IKV+ + EL+ LM +YTKFCEEED+ H Sbjct: 16 LSSSVSKSHLSPFSFSRCFSTVLEGLKYANSHEWVKHEGSVATIGITAHAQDHLGEVVFVELPEDNTSVSKEKSFGAVESVKATSEILSPISGEIIEVNKKLTESPGLINSSPYEDGWMIKVKPSSPAELESLMGPKEYTKFCEEEDAAH 165
BLAST of CF833936 vs. ExPASy Swiss-Prot
Match: GCSH_FLATR (Glycine cleavage system H protein, mitochondrial OS=Flaveria trinervia GN=GDCSH PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 5.074e-45 Identity = 93/156 (59.62%), Postives = 113/156 (72.44%), Query Frame = -2 Query: 297 LWASRAESYLRISV--------FHRGFSS--VIKDLKYADSHEWVKVDGNCAAIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKDTSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNGGELKKLMDADQYTKFCEEE 734 +WAS LR+S R FSS V+ LKYA+SHEWVK +G+ A IGITDHAQDHLG+VV+VELPEVG +V + FGAVESVK TSDVNSP+SG++VEVN +L+ +P L+N SPYEDGW+IKV+ N EL LM +YTKFCEEE Sbjct: 5 IWASSTAKALRLSSASRPHFSPLFRCFSSAAVLDGLKYANSHEWVKHEGSVATIGITDHAQDHLGEVVFVELPEVGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLTKTPGLINKSPYEDGWMIKVKPSNPSELDSLMGPKEYTKFCEEE 160
BLAST of CF833936 vs. ExPASy Swiss-Prot
Match: GCSH_FLAPU (Glycine cleavage system H protein, mitochondrial (Fragment) OS=Flaveria pubescens GN=GDCSH PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.749e-43 Identity = 87/148 (58.78%), Postives = 109/148 (73.65%), Query Frame = -2 Query: 315 LWASRAESYLRISV--------FHRGFSSVIKDLKYADSHEWVKVDGNCAAIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKDTSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNGGELKKLMDADQYT 734 +WAS + LR+S R FSSV+ LKYA+SHEWVK +G+ A +GITDHAQDHLG+VV+V+LPE G +V + FGAVESVK TSDVNSP+SG++VEVN +LS +P L+NSSPYEDGW+IKV+ N EL LM A +YT Sbjct: 5 MWASSTANALRLSSATRPHYSPLSRCFSSVLDGLKYANSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLSETPGLINSSPYEDGWMIKVKPSNPSELDSLMGAKEYT 152
BLAST of CF833936 vs. ExPASy Swiss-Prot
Match: GCSH_MESCR (Glycine cleavage system H protein, mitochondrial OS=Mesembryanthemum crystallinum GN=GDCSH PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 8.101e-43 Identity = 90/159 (56.60%), Postives = 111/159 (69.81%), Query Frame = -2 Query: 291 LWASRAESYLRISV-----------FHRGFSSVIKDLKYADSHEWVKVDGNCAAIGITDHAQDHLGDVVYVELPEVGVTVKQDASFGAVESVKDTSDVNSPVSGKVVEVNEELSSSPALVNSSPYEDGWIIKVEMDNGGELKKLMDADQYTKFCEEEDS 734 +WAS A + L +S R FS+V+ LKYA SHEWVK G+ A IGITDHAQ HLGDVV+ ELPE G V F +VESVK TSDVNSP+SG++VEVN +LS SP L+NSSPYE+GW++KV+ N EL+ LM + +YTKFCEEED+ Sbjct: 5 MWASSAANALGVSCAPKSHLLPALSLSRCFSTVLDGLKYASSHEWVKHGGSVATIGITDHAQGHLGDVVFAELPEGGA-VSAGKPFASVESVKATSDVNSPISGEIVEVNTKLSDSPGLLNSSPYEEGWMVKVKPSNPAELESLMGSKEYTKFCEEEDA 162 The following BLAST results are available for this feature:
BLAST of CF833936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 461
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF833936 ID=CF833936; Name=CF833936; organism=Citrus sinensis; type=EST; length=807bpback to top |