CF833981
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF833981 vs. ExPASy Swiss-Prot
Match: ATPG2_ARATH (ATP synthase gamma chain 2, chloroplastic OS=Arabidopsis thaliana GN=ATPC2 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 6.819e-41 Identity = 85/114 (74.56%), Postives = 99/114 (86.84%), Query Frame = -1 Query: 227 DELFRLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEALTQ 568 DE+FRLT+ +GK+ VER + K E+SPLM FEQDP QILDAMMPLY+NSQILRALQES ASE+A+RM+AMS ATDNA ELKKNL++AYN+ RQAKITGELLEIVAGAEAL + Sbjct: 272 DEMFRLTSKDGKLAVERTKLEVEKPEISPLMQFEQDPVQILDAMMPLYLNSQILRALQESLASELASRMNAMSNATDNAVELKKNLTMAYNRARQAKITGELLEIVAGAEALRE 385
BLAST of CF833981 vs. ExPASy Swiss-Prot
Match: ATPG_MAIZE (ATP synthase subunit gamma, chloroplastic OS=Zea mays PE=1 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 2.591e-40 Identity = 83/112 (74.11%), Postives = 98/112 (87.50%), Query Frame = -1 Query: 233 DELFRLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 568 DELFRLTT EGK+ VER+ V SP++ FEQDP QILDA++PLY+NSQILRALQES ASE+AARMSAMS+ATDNA EL+KNLS+AYN++RQAKITGE+LEIVAGA+AL Sbjct: 246 DELFRLTTKEGKLTVEREKVKIETQPFSPVVQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSSATDNAIELRKNLSIAYNRQRQAKITGEILEIVAGADAL 357
BLAST of CF833981 vs. ExPASy Swiss-Prot
Match: ATPG_TOBAC (ATP synthase gamma chain, chloroplastic OS=Nicotiana tabacum GN=ATPC PE=1 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 9.847e-40 Identity = 82/112 (73.21%), Postives = 96/112 (85.71%), Query Frame = -1 Query: 233 DELFRLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 568 DE FRLTT EGK+ VERD + + SP++ FEQDP QILDA++PLY+NSQILRALQES ASE+AARMSAMS+ATDNA ELKKNLS YN++RQAKITGE+LEIVAGA+AL Sbjct: 265 DEFFRLTTKEGKLTVERDIIRTKTTDFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSSATDNATELKKNLSRVYNRQRQAKITGEILEIVAGADAL 376
BLAST of CF833981 vs. ExPASy Swiss-Prot
Match: ATPG_SPIOL (ATP synthase gamma chain, chloroplastic OS=Spinacia oleracea GN=ATPC PE=1 SV=2) HSP 1 Score: 159.844 bits (403), Expect = 8.336e-39 Identity = 81/111 (72.97%), Postives = 94/111 (84.68%), Query Frame = -1 Query: 236 DELFRLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEA 568 DELFRLTT EGK+ VERD + SP++ FEQDPAQILDA++PLY+NSQILRALQES ASE+AARM+AMS ATDNA+ELKK LS+ YN+ RQAKITGE+LEIVAGA A Sbjct: 252 DELFRLTTKEGKLTVERDMIKTETPAFSPILEFEQDPAQILDALLPLYLNSQILRALQESLASELAARMTAMSNATDNANELKKTLSINYNRARQAKITGEILEIVAGANA 362
BLAST of CF833981 vs. ExPASy Swiss-Prot
Match: ATPG1_ARATH (ATP synthase gamma chain 1, chloroplastic OS=Arabidopsis thaliana GN=ATPC1 PE=1 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.572e-37 Identity = 77/111 (69.37%), Postives = 95/111 (85.59%), Query Frame = -1 Query: 236 DELFRLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEA 568 DE FRLTT EGK+ VER++ + SP++ FEQDP QILDA++PLY+NSQILRALQES ASE+AARMSAMS+A+DNA +LKK+LS+ YN++RQAKITGE+LEIVAGA A Sbjct: 261 DEFFRLTTKEGKLTVERETFRTPTADFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSSASDNASDLKKSLSMVYNRKRQAKITGEILEIVAGANA 371
BLAST of CF833981 vs. ExPASy Swiss-Prot
Match: ATPG_PEA (ATP synthase gamma chain, chloroplastic OS=Pisum sativum GN=ATPC PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.627e-34 Identity = 74/108 (68.52%), Postives = 88/108 (81.48%), Query Frame = -1 Query: 245 DELFRLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAG 568 DELFRLTT EGK+ VERD + + SP++ FEQDP QILDA++PLY+NSQILR LQES ASE+AARMSAMS+A DNA ELK +L+ YN+ QAKITGE+LEIVAG Sbjct: 262 DELFRLTTKEGKLTVERDVIRSKTVDFSPILQFEQDPVQILDALLPLYLNSQILRPLQESLASELAARMSAMSSAFDNASELKTDLTRVYNRATQAKITGEILEIVAG 369
BLAST of CF833981 vs. ExPASy Swiss-Prot
Match: ATPG_ANAVT (ATP synthase gamma chain OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=atpG PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 2.597e-32 Identity = 72/113 (63.72%), Postives = 91/113 (80.53%), Query Frame = -1 Query: 230 DELFRLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEALT 568 DE+FRLTT G+ VER +VT L M+FEQDP QILD+++PLY+++Q+LRALQES ASE+AARM+AMS A+DNA EL K+LS++YN+ RQA IT ELLE+V GAEALT Sbjct: 203 DEIFRLTTRGGQFEVERQTVTTQARPLPRDMIFEQDPVQILDSLLPLYLSNQLLRALQESAASELAARMTAMSNASDNAGELIKSLSLSYNKARQAAITQELLEVVGGAEALT 315
BLAST of CF833981 vs. ExPASy Swiss-Prot
Match: ATPG_NOSP7 (ATP synthase gamma chain OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=atpG PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 5.786e-32 Identity = 70/113 (61.95%), Postives = 90/113 (79.65%), Query Frame = -1 Query: 230 DELFRLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEALT 568 DE+FRLTT GK VER+ V L+P M+FEQDP QILD+++PLY+++Q+LRALQES ASE+AARM+AMS A++NA EL L+++YN+ RQA IT ELLE+V GAEALT Sbjct: 203 DEIFRLTTRGGKFEVEREKVASQVRPLAPDMIFEQDPVQILDSLLPLYLSNQLLRALQESAASELAARMTAMSNASENAGELINTLTLSYNKARQAAITQELLEVVGGAEALT 315
BLAST of CF833981 vs. ExPASy Swiss-Prot
Match: ATPG_CHLRE (ATP synthase gamma chain, chloroplastic OS=Chlamydomonas reinhardtii GN=ATPC PE=1 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 7.557e-32 Identity = 68/111 (61.26%), Postives = 88/111 (79.28%), Query Frame = -1 Query: 236 DELFRLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEA 568 DE+F+LTT G+ VER+ T L P ++FEQ+PAQILDA++PLYM+S +LR+LQE+ ASE+AARM+AM+ A+DNA ELKK L+V YN++RQAKIT EL EIV GA A Sbjct: 245 DEIFKLTTKGGEFAVEREKTTIETEALDPSLIFEQEPAQILDALLPLYMSSCLLRSLQEALASELAARMNAMNNASDNAKELKKGLTVQYNKQRQAKITQELAEIVGGAAA 355
BLAST of CF833981 vs. ExPASy Swiss-Prot
Match: ATPG_ANASP (ATP synthase gamma chain OS=Anabaena sp. (strain PCC 7120) GN=atpG PE=3 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 7.557e-32 Identity = 71/113 (62.83%), Postives = 91/113 (80.53%), Query Frame = -1 Query: 230 DELFRLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEALT 568 DE+FRLTT G+ VER +VT L M+FEQDP QILD+++PLY+++Q+LRALQES ASE+AARM+AMS A++NA EL K+LS++YN+ RQA IT ELLE+V GAEALT Sbjct: 203 DEIFRLTTRGGQFQVERQTVTSQARPLPRDMIFEQDPVQILDSLLPLYLSNQLLRALQESAASELAARMTAMSNASENAGELIKSLSLSYNKARQAAITQELLEVVGGAEALT 315 The following BLAST results are available for this feature:
BLAST of CF833981 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF833981 ID=CF833981; Name=CF833981; organism=Citrus sinensis; type=EST; length=568bpback to top |