CF834005

Overview
NameCF834005
Unique NameCF834005
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length419
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10114 contig Csv1_Contig10114:359..776. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834005 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.570e-32
Identity = 57/86 (66.28%), Postives = 72/86 (83.72%), Query Frame = -2
Query:  137 KHTTGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERT 394
            +H  GDMF+SVPKGDAIFMKWILHDW+D HCL++LKNC KS+PE+GKVIV E +LPE P+T+  +++  H DV+M+ H PGGKERT
Sbjct:  237 EHVGGDMFESVPKGDAIFMKWILHDWSDAHCLQVLKNCYKSLPENGKVIVAECILPEAPDTTPATQNVIHIDVIMLAHNPGGKERT 322          

HSP 2 Score: 29.6462 bits (65), Expect = 1.570e-32
Identity = 18/37 (48.65%), Postives = 20/37 (54.05%), Query Frame = -3
Query:   40 ERREQGHEFMTLATGAGFSGRSCERAIGNFWVMELDK 150
            ER E+  EF  LA GAGF G +      N WVME  K
Sbjct:  320 ERTEK--EFEALAKGAGFKGFNKAACALNTWVMEFCK 354          
BLAST of CF834005 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 8.451e-31
Identity = 57/95 (60.00%), Postives = 71/95 (74.74%), Query Frame = -2
Query:   98 GDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERTRS*IHDPGYWRWF 382
            GDMF SVPK DAIFMKWI HDW+D+HC+KLLKNC +++P +GKVI+VE +LPE P+TS  +KS  H D++M+ H PGGKERT         W WF
Sbjct:  246 GDMFVSVPKADAIFMKWICHDWSDDHCIKLLKNCYEALPANGKVIIVECILPEAPDTSAATKSKVHGDIIMLAHNPGGKERTEKDFEALANWGWF 340          
BLAST of CF834005 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 3.211e-30
Identity = 56/86 (65.12%), Postives = 69/86 (80.23%), Query Frame = -2
Query:  137 KHTTGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERT 394
            +H  GDMF SVPKGDAIFMKWI HDW+DEHC+K LKNC +S+PEDGKVI+ E +LPE P++S+ +K   H D +M+ H PGGKERT
Sbjct:  244 EHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYESLPEDGKVILAECILPETPDSSLSTKQVVHVDCIMLAHNPGGKERT 329          
BLAST of CF834005 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.811e-30
Identity = 54/86 (62.79%), Postives = 69/86 (80.23%), Query Frame = -2
Query:  137 KHTTGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERT 394
            +H  GDMF SVPKGDAIFMKWI HDW+DEHC+K LKNC  ++P++GKVI+ E +LPE P+T + +K+  H DV+M+ H PGGKERT
Sbjct:  244 EHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYDALPQNGKVILAECVLPEAPDTGLATKNVVHIDVIMLAHNPGGKERT 329          

HSP 2 Score: 24.6386 bits (52), Expect = 6.811e-30
Identity = 16/37 (43.24%), Postives = 19/37 (51.35%), Query Frame = -3
Query:   40 ERREQGHEFMTLATGAGFSGRSCERAIGNFWVMELDK 150
            ER E+  EF  LA  AGF   +      N W+MEL K
Sbjct:  327 ERTEK--EFQGLAKAAGFKQFNKACCAYNTWIMELLK 361          
BLAST of CF834005 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.867e-30
Identity = 54/86 (62.79%), Postives = 68/86 (79.07%), Query Frame = -2
Query:  137 KHTTGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERT 394
            +H  GDMF SVPKGDAIFMKWI HDW+DEHCLK LKNC  ++P++GKVI+ E +LP  P++S+ +K   H DV+M+ H PGGKERT
Sbjct:  246 EHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERT 331          

HSP 2 Score: 27.335 bits (59), Expect = 8.867e-30
Identity = 17/37 (45.95%), Postives = 21/37 (56.76%), Query Frame = -3
Query:   40 ERREQGHEFMTLATGAGFSGRSCERAIGNFWVMELDK 150
            ER EQ  EF  LA GAGF G +   +  N +V+E  K
Sbjct:  329 ERTEQ--EFQALAKGAGFQGFNVACSAFNTYVIEFLK 363          
BLAST of CF834005 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.594e-29
Identity = 56/86 (65.12%), Postives = 69/86 (80.23%), Query Frame = -2
Query:  137 KHTTGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERT 394
            +H  GDMF SVPKGDAIFMKWI HDW+DEHCLKLLKNC  ++P +GKVI+ E +LPEVP++S+ +K   H DV+ + H PGGKERT
Sbjct:  222 EHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKLLKNCYDALPNNGKVILAECILPEVPDSSLATKGVVHIDVITVAHNPGGKERT 307          
BLAST of CF834005 vs. ExPASy Swiss-Prot
Match: OMT1_CHRAE (Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.594e-29
Identity = 56/86 (65.12%), Postives = 69/86 (80.23%), Query Frame = -2
Query:  137 KHTTGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERT 394
            +H  GDMF SVPKGDAIFMKWI HDW+DEHCLKLLKNC  ++P +GKVI+ E +LPEVP++S+ +K   H DV+ + H PGGKERT
Sbjct:  222 EHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKLLKNCYDALPNNGKVILAECILPEVPDSSLATKGVVHIDVITVAHNPGGKERT 307          
BLAST of CF834005 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 2.082e-29
Identity = 56/94 (59.57%), Postives = 76/94 (80.85%), Query Frame = -2
Query:  137 ESPNQS--KHTTGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERT 412
            ++P+ S  +H  GDMF SVPKGDAIFMKWI HDW+D+HC KLLKNC +++P++GKVI+ E +LPE P+TS+ +++  H DV+M+ H PGGKERT
Sbjct:  225 DAPSHSGVEHVGGDMFVSVPKGDAIFMKWICHDWSDDHCRKLLKNCYQALPDNGKVILAECVLPEAPDTSLATQNVVHVDVVMLAHNPGGKERT 318          
BLAST of CF834005 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 2.549e-29
Identity = 53/86 (61.63%), Postives = 67/86 (77.91%), Query Frame = -2
Query:  137 KHTTGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERT 394
            +H   DMF SVPK DAIFMKWI HDW+DEHCLK LKNC +++P +GKV+V E +LPE P+TS  +K+  H D++M+ H PGGKERT
Sbjct:  242 EHVGRDMFVSVPKADAIFMKWICHDWSDEHCLKFLKNCYEALPANGKVLVAECILPETPDTSAATKNAVHVDIVMLAHNPGGKERT 327          

HSP 2 Score: 27.335 bits (59), Expect = 2.549e-29
Identity = 17/37 (45.95%), Postives = 19/37 (51.35%), Query Frame = -3
Query:   40 ERREQGHEFMTLATGAGFSGRSCERAIGNFWVMELDK 150
            ER E+  EF  LA GAGF+G          WVME  K
Sbjct:  325 ERTEK--EFEALAKGAGFTGFRRACCAYQTWVMEFHK 359          
BLAST of CF834005 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 4.319e-29
Identity = 55/86 (63.95%), Postives = 65/86 (75.58%), Query Frame = -2
Query:  137 KHTTGDMFQSVPKGDAIFMKWILHDWNDEHCLKLLKNCCKSIPEDGKVIVVESMLPEVPNTSIESKSNSHFDVLMMIHCPGGKERT 394
            +H  GDMF SVPKGDAIFMKWI HDW+DEHCLK LKNC  ++PE GKVIV E +LP  P+ S+ +K   H D +M+ H PGGKERT
Sbjct:  251 EHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPEHGKVIVAECILPLSPDPSLATKGVIHIDAIMLAHNPGGKERT 336          

HSP 2 Score: 25.7942 bits (55), Expect = 4.319e-29
Identity = 17/37 (45.95%), Postives = 19/37 (51.35%), Query Frame = -3
Query:   40 ERREQGHEFMTLATGAGFSGRSCERAIGNFWVMELDK 150
            ER E+  EF  LA GAGF G        N +VME  K
Sbjct:  334 ERTEK--EFEALAIGAGFKGFKVACCAFNTYVMEFLK 368          
The following BLAST results are available for this feature:
BLAST of CF834005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
COMT1_ZINEL1.570e-3266.28Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]
COMT1_CAPCH8.451e-3160.00Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
OMT1_ARATH3.211e-3065.12Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
COMT1_OCIBA6.811e-3062.79Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT1_PRUDU8.867e-3062.79Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
OMT2_CHRAE1.594e-2965.12Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]
OMT1_CHRAE1.594e-2965.12Quercetin 3-O-methyltransferase 1 OS=Chrysospleniu... [more]
COMT1_COFCA2.082e-2959.57Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT1_CAPAN2.549e-2961.63Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT1_CLABR4.319e-2963.95Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04L16_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04L16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834005 ID=CF834005; Name=CF834005; organism=Citrus sinensis; type=EST; length=419bp
GATTTGCTTTATTTCTAGGACGCATGGCCAAGCACTCTACTTATCCAATT
CCATAACCCAGAAATTACCAATAGCACGTTCACAACTCCTCCCACTAAAA
CCAGCGCCAGTAGCCAGGGTCATGAATTCATGACCTTGTTCTCTCCTTTC
CACCGGGACAATGAATCATCATAAGCACGTCAAAATGGGAATTTGATTTT
GATTCAATGCTTGTATTAGGAACTTCTGGAAGCATTGACTCCACAACGAT
TACCTTTCCATCTTCCGGAATGCTTTTGCAGCAATTCTTCAACAACTTCA
AGCAATGCTCATCATTCCAATCGTGCAGTATCCACTTCATAAAAATGGCA
TCACCTTTTGGAACACTTTGGAACATATCACCTGTGGTGTGTTTGGATTG
ATTTGGGCTCTCTATTTTA
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