CF834006

Overview
NameCF834006
Unique NameCF834006
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length329
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834006 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.128e-17
Identity = 40/65 (61.54%), Postives = 47/65 (72.31%), Query Frame = 1
Query:  133 IFFEITTVNKIESPNQSTHTKGDMFQRVPKGDAIFMKWILHDWNDEHCLKGLKNCCKSIPEDGKV 327
            +  + TT   IE      H  GDMF+ VPKGDAIFMKWILHDW+D HCL+ LKNC KS+PE+GKV
Sbjct:  226 VIADATTYQGIE------HVGGDMFESVPKGDAIFMKWILHDWSDAHCLQVLKNCYKSLPENGKV 284          
BLAST of CF834006 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.042e-17
Identity = 36/47 (76.60%), Postives = 40/47 (85.11%), Query Frame = 1
Query:  187 HTKGDMFQRVPKGDAIFMKWILHDWNDEHCLKGLKNCCKSIPEDGKV 327
            H  GDMF  VPKGDAIFMKWI HDW+DEHC+K LKNC +S+PEDGKV
Sbjct:  245 HVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYESLPEDGKV 291          
BLAST of CF834006 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.785e-16
Identity = 35/47 (74.47%), Postives = 38/47 (80.85%), Query Frame = 1
Query:  187 HTKGDMFQRVPKGDAIFMKWILHDWNDEHCLKGLKNCCKSIPEDGKV 327
            H  GDMF  VPKGDAIFMKWI HDW+DEHCLK LKNC  ++PE GKV
Sbjct:  252 HVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPEHGKV 298          
BLAST of CF834006 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.017e-15
Identity = 34/47 (72.34%), Postives = 39/47 (82.98%), Query Frame = 1
Query:  187 HTKGDMFQRVPKGDAIFMKWILHDWNDEHCLKGLKNCCKSIPEDGKV 327
            H  GDMF  VPKGDAIFMKWI HDW+DEHCLK LKNC  ++P++GKV
Sbjct:  247 HVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPDNGKV 293          
BLAST of CF834006 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.017e-15
Identity = 34/47 (72.34%), Postives = 39/47 (82.98%), Query Frame = 1
Query:  187 HTKGDMFQRVPKGDAIFMKWILHDWNDEHCLKGLKNCCKSIPEDGKV 327
            H  GDMF  VPKGDAIFMKWI HDW+DEHCLK LKNC  ++P++GKV
Sbjct:  247 HVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPDNGKV 293          
BLAST of CF834006 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.734e-15
Identity = 34/47 (72.34%), Postives = 39/47 (82.98%), Query Frame = 1
Query:  187 HTKGDMFQRVPKGDAIFMKWILHDWNDEHCLKGLKNCCKSIPEDGKV 327
            H  GDMF  VPKGDAIFMKWI HDW+D HCLK LKNC +++PE+GKV
Sbjct:  247 HVGGDMFVSVPKGDAIFMKWICHDWSDAHCLKFLKNCHEALPENGKV 293          
BLAST of CF834006 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.265e-15
Identity = 34/47 (72.34%), Postives = 38/47 (80.85%), Query Frame = 1
Query:  187 HTKGDMFQRVPKGDAIFMKWILHDWNDEHCLKGLKNCCKSIPEDGKV 327
            H  GDMF  VPKGDAIFMKWI HDW+DEHCLK LKNC  ++P +GKV
Sbjct:  223 HVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKLLKNCYDALPNNGKV 269          
BLAST of CF834006 vs. ExPASy Swiss-Prot
Match: OMT1_CHRAE (Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.265e-15
Identity = 34/47 (72.34%), Postives = 38/47 (80.85%), Query Frame = 1
Query:  187 HTKGDMFQRVPKGDAIFMKWILHDWNDEHCLKGLKNCCKSIPEDGKV 327
            H  GDMF  VPKGDAIFMKWI HDW+DEHCLK LKNC  ++P +GKV
Sbjct:  223 HVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKLLKNCYDALPNNGKV 269          
BLAST of CF834006 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.265e-15
Identity = 33/47 (70.21%), Postives = 39/47 (82.98%), Query Frame = 1
Query:  187 HTKGDMFQRVPKGDAIFMKWILHDWNDEHCLKGLKNCCKSIPEDGKV 327
            H  GDMF  VPKGDAIFMKWI HDW+DEHC+K LKNC  ++P++GKV
Sbjct:  245 HVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYDALPQNGKV 291          
BLAST of CF834006 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.046e-15
Identity = 31/47 (65.96%), Postives = 39/47 (82.98%), Query Frame = 1
Query:  187 HTKGDMFQRVPKGDAIFMKWILHDWNDEHCLKGLKNCCKSIPEDGKV 327
            H  GDMF  +PK DA+FMKWI HDW+DEHCLK LKNC +++P++GKV
Sbjct:  247 HVGGDMFVSIPKADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKV 293          
The following BLAST results are available for this feature:
BLAST of CF834006 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
COMT1_ZINEL4.128e-1761.54Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]
OMT1_ARATH7.042e-1776.60Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
COMT1_CLABR7.785e-1674.47Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
COMT1_ROSCH1.017e-1572.34Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
COMT1_PRUDU1.017e-1572.34Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_CATRO1.734e-1572.34Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
OMT2_CHRAE2.265e-1572.34Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]
OMT1_CHRAE2.265e-1572.34Quercetin 3-O-methyltransferase 1 OS=Chrysospleniu... [more]
COMT1_OCIBA2.265e-1570.21Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT1_MEDSA5.046e-1565.96Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04L16_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04L16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834006 ID=CF834006; Name=CF834006; organism=Citrus sinensis; type=EST; length=329bp
TTTTTTTCAGACCTTAAAGCTTTTCTTTGGATGATTTAAAGGTTTTCCAG
GTCTTTAACAAGAGGGCATTAATAAATTCAACTAGCCTAAGTTTAAATAA
CCCTTAATTCAAAGGGACAAGCCAGACTCTTCATCTTCTTCGAGATCACC
ACTGTAAATAAAATAGAGAGCCCAAATCAATCCACACACACCAAAGGTGA
TATGTTCCAAAGGGTTCCAAAAGGTGATGCCATTTTTATGAAGTGGATAC
TGCACGATTGGAATGATGAACATTGCTTGAAGGGGCTGAAGAATTGCTGC
AAAAGCATTCCGGAAGATGGAAAGGTAAT
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