CF834028
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834028 vs. ExPASy Swiss-Prot
Match: SMT3_ARATH (Ubiquitin-like protein SMT3 OS=Arabidopsis thaliana GN=SMT3 PE=1 SV=2) HSP 1 Score: 166.777 bits (421), Expect = 6.474e-41 Identity = 80/89 (89.89%), Postives = 84/89 (94.38%), Query Frame = 3 Query: 51 QEEDKKPNDQSAHINLQDKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 317 QEEDKKP D AHINL+ KGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV++NSIAFLFDGRRLR EQTPDEL+MEDGDEIDAMLHQTGG Sbjct: 5 QEEDKKPGDGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFLFDGRRLRAEQTPDELDMEDGDEIDAMLHQTGG 93
BLAST of CF834028 vs. ExPASy Swiss-Prot
Match: SMT3_ORYSJ (Ubiquitin-like protein SMT3 OS=Oryza sativa subsp. japonica GN=SMT3 PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 6.059e-39 Identity = 80/93 (86.02%), Postives = 84/93 (90.32%), Query Frame = 3 Query: 54 EEDKKP---NDQSAHINLQDKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGML 323 EEDKKP AHINL+ KGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV++N+IAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG L Sbjct: 6 EEDKKPAGGEGGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNAIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGCL 98
BLAST of CF834028 vs. ExPASy Swiss-Prot
Match: PMT3_SCHPO (Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe GN=pmt3 PE=1 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 3.569e-23 Identity = 51/105 (48.57%), Postives = 72/105 (68.57%), Query Frame = 3 Query: 3 VRDEAEDLMSGVTNTPQEEDKKPNDQSAHINLQDKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 317 + D + ++ T ++D KP+ + HINL+ GQD NEVFF+IK++T+ KLM YC RQ +NS+ FL DG R+R +QTP EL+MEDGD+I+A+L Q GG Sbjct: 9 ISDADKSAITPTTGDTSQQDVKPSTE--HINLKVVGQDNNEVFFKIKKTTEFSKLMKIYCARQGKSMNSLRFLVDGERIRPDQTPAELDMEDGDQIEAVLEQLGG 111
BLAST of CF834028 vs. ExPASy Swiss-Prot
Match: SUMO3_XENTR (Small ubiquitin-related modifier 3 OS=Xenopus tropicalis GN=sumo3 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.026e-18 Identity = 48/91 (52.75%), Postives = 58/91 (63.74%), Query Frame = 3 Query: 48 PQEEDKKPNDQSAHINLQDKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGM 320 P+E K ND HINL+ GQDG+ V F+IKR T L KLM AYCDRQ + + I F FDG+ + TP +LEMED D ID QTGG+ Sbjct: 6 PKEGVKTEND---HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCDRQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGV 93
BLAST of CF834028 vs. ExPASy Swiss-Prot
Match: SUMO3_XENLA (Small ubiquitin-related modifier 3 OS=Xenopus laevis GN=sumo3 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.026e-18 Identity = 48/91 (52.75%), Postives = 58/91 (63.74%), Query Frame = 3 Query: 48 PQEEDKKPNDQSAHINLQDKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGM 320 P+E K ND HINL+ GQDG+ V F+IKR T L KLM AYCDRQ + + I F FDG+ + TP +LEMED D ID QTGG+ Sbjct: 6 PKEGVKTEND---HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCDRQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGV 93
BLAST of CF834028 vs. ExPASy Swiss-Prot
Match: SUMO3_CHICK (Small ubiquitin-related modifier 3 OS=Gallus gallus GN=SUMO3 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.515e-18 Identity = 47/91 (51.65%), Postives = 58/91 (63.74%), Query Frame = 3 Query: 48 PQEEDKKPNDQSAHINLQDKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGM 320 P+E K ND HINL+ GQDG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ + TP +LEMED D ID QTGG+ Sbjct: 6 PKEGVKTEND---HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINEADTPAQLEMEDEDTIDVFQQQTGGL 93
BLAST of CF834028 vs. ExPASy Swiss-Prot
Match: SUMO3_HUMAN (Small ubiquitin-related modifier 3 OS=Homo sapiens GN=SUMO3 PE=1 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 5.896e-18 Identity = 47/91 (51.65%), Postives = 58/91 (63.74%), Query Frame = 3 Query: 48 PQEEDKKPNDQSAHINLQDKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGM 320 P+E K ND HINL+ GQDG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ + TP +LEMED D ID QTGG+ Sbjct: 6 PKEGVKTEND---HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGV 93
BLAST of CF834028 vs. ExPASy Swiss-Prot
Match: SUMO3_RAT (Small ubiquitin-related modifier 3 OS=Rattus norvegicus GN=Sumo3 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 7.701e-18 Identity = 47/90 (52.22%), Postives = 57/90 (63.33%), Query Frame = 3 Query: 48 PQEEDKKPNDQSAHINLQDKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 317 P+E K ND HINL+ GQDG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ + TP +LEMED D ID QTGG Sbjct: 6 PKEGVKTEND---HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGG 92
BLAST of CF834028 vs. ExPASy Swiss-Prot
Match: SUMO3_MOUSE (Small ubiquitin-related modifier 3 OS=Mus musculus GN=Sumo3 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 7.701e-18 Identity = 47/90 (52.22%), Postives = 57/90 (63.33%), Query Frame = 3 Query: 48 PQEEDKKPNDQSAHINLQDKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 317 P+E K ND HINL+ GQDG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ + TP +LEMED D ID QTGG Sbjct: 6 PKEGVKTEND---HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGG 92
BLAST of CF834028 vs. ExPASy Swiss-Prot
Match: SUMO3_DANRE (Small ubiquitin-related modifier 3 OS=Danio rerio GN=sumo3 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 7.701e-18 Identity = 47/90 (52.22%), Postives = 57/90 (63.33%), Query Frame = 3 Query: 48 PQEEDKKPNDQSAHINLQDKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 317 P+E K ND HINL+ GQDG+ V F+IKR T L KLM AYC+RQ + + I F FDG+ + TP +LEMED D ID QTGG Sbjct: 6 PREGVKTEND---HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSIRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGG 92 The following BLAST results are available for this feature:
BLAST of CF834028 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834028 ID=CF834028; Name=CF834028; organism=Citrus sinensis; type=EST; length=557bpback to top |