CF834054

Overview
NameCF834054
Unique NameCF834054
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834054 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.450e-20
Identity = 54/141 (38.30%), Postives = 82/141 (58.16%), Query Frame = -1
Query:  239 CPLDVIQLPFDMQNGIELTLSPYNNFT-IVRESPDFNLRFSVLLFGRD-YCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGIYKIVHCPSVWEFCVKLCHNVGRLFEDGVRRLVLVCDDEPAF 655
            CP  V+Q   D+ NG  +  S  ++   +VR S D N+ F  +   RD  C+   +W++DNYD ++GKW++TT G+ G PG  TL +WFK+EK G     YK   CPSV + C  LC ++GR  +D  +  + + D+E A+
Sbjct:   69 CPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPI---RDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLG--YKFRFCPSVCDSCTTLCSDIGRHSDDDGQIRLALSDNEWAW 204          
BLAST of CF834054 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 88.1965 bits (217), Expect = 4.662e-17
Identity = 49/140 (35.00%), Postives = 76/140 (54.29%), Query Frame = -1
Query:  239 CPLDVIQLPFDMQNGIELTLSPYN-NFTIVRESPDFNLRFSVLLFGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGIYKIVHCPSVWEFCVKLCHNVGRLFEDGVRRLVLVCDDEPAF 655
            CP  V+Q   ++ +   L   P N    +VR S D N+ FS  +  R       +W++D YD ++G++F+T GG+ G+PG ET+ +WFK+E+     G YK+V CP+V   C   C +VG   +   RR + + D   AF
Sbjct:   76 CPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCR--WTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCG-SGFYKLVFCPTVCGSCKVKCGDVGIYIDQKGRRRLALSDKPFAF 212          
BLAST of CF834054 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.166e-14
Identity = 53/137 (38.69%), Postives = 72/137 (52.55%), Query Frame = -1
Query:  254 CPLDVIQLPFDMQNGIELTLSPYNNF--TIVRESPDFNLRFSVLLFGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGIYKIVHCPSVWEFCVKLCHNVGRLFED-GVRRLVLVCD 655
            CPL V+Q PFD  NG  +  S   N    IV ES D N++F++ +     CNE   WKVD +    G W +T GG  G+ G E+  + FK++K G  P  YK   CPS     +  C+NV   F+   +RRL+L  D
Sbjct:   45 CPLSVVQDPFD--NGEPIIFSAIKNVKDNIVFESVDLNVKFNITI----NCNETTAWKVDRFPGVIG-WTVTLGGEKGYHGFESTHSMFKIKKAG-LPFSYKFHFCPSYPRTRLIPCNNVDIFFDKYRIRRLILTND 173          
The following BLAST results are available for this feature:
BLAST of CF834054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ASP_THECC3.450e-2038.3021 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU4.662e-1735.00Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
LSPI_CARPA2.166e-1438.69Latex serine proteinase inhibitor OS=Carica papaya... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_04N07_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04N07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834054 ID=CF834054; Name=CF834054; organism=Citrus sinensis; type=EST; length=703bp
TTTTTTTTTTTTTTTTTACAAACAAAAAACCCTTGATTTCGATTTTCATA
AGGTATACACCAACAGTAAAATTTATTAACCCCGAAAGGATCACAGGGTA
CTTATTCATAATTTTAATCCTAAAAATTAAAGAGCAGCTAGCCTGGTCCG
TTATTTAAAATAATAATACCGCTAGCTGGTTAGGGTACATTGATTACACA
AACGTTGATCTTTCTGTAGCGGGAATTAACACAACAGGAAATGCCGGCTC
ATCATCACAAACCAAAACCAAACGTCGAACGCCATCCTCAAACAAACGGC
CAACGTTGTGGCAAAGTTTGACACAAAACTCCCAAACGGATGGACAATGA
ACGATTTTGTATATACCTGGAAAATTTCCAATTTTCTCAAGCTTAAACCA
ATTTAGCAAAGTTTCAGCTCCAGGGTGACCATCAAGTCCCCCGGTTGTTA
TAAACCATTTGCCTGATGCCGCGTCATAATTATCAACTTTCCACAACGGT
TGTTCGTTACAATAGTCACGTCCAAATAGCAACACTGAAAATCTCAAGTT
GAAATCAGGGGATTCTCGGACAATTGTAAAATTGTTATACGGGGACAGTG
TTAATTCAATTCCATTTTGCATATCAAAAGGTAACTGGATAACGTCCAGC
GGACAATATCCGTTTCTGCCACCGTGTAGGCTAACTCCACCACCGCCAGC
TCC
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