CF834080

Overview
NameCF834080
Unique NameCF834080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834080 vs. ExPASy Swiss-Prot
Match: CFI_CITSI (Chalcone--flavonone isomerase OS=Citrus sinensis GN=CHI PE=2 SV=1)

HSP 1 Score: 432.18 bits (1110), Expect = 1.944e-120
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = -2
Query:  233 PSPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSPGSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLNVTSDKMK 892
            PSPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSPGSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLNVTSDKMK
Sbjct:    3 PSPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSPGSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLNVTSDKMK 222          
BLAST of CF834080 vs. ExPASy Swiss-Prot
Match: CFI_CAMSI (Chalcone--flavonone isomerase OS=Camellia sinensis GN=CHI PE=2 SV=2)

HSP 1 Score: 323.168 bits (827), Expect = 1.272e-87
Identity = 160/212 (75.47%), Postives = 185/212 (87.26%), Query Frame = -2
Query:  257 SPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALL 889
            SPSV ++Q+E+  F P+V+PPG++K  FLGGAGERGLEI+GKF+KFTAIGVYLED A+P LA KWKGKTAEELT+SV+FFRD+V+GPFEKF +VTMILPLTG QYSEKV ENC+A WK  G YTDAEAKAIEKF EVFKDE FPPG SILFTQSP GSLTI+FSKDGS+P+ G  V+E+  LSEAVLES+IGK+GVSPAAKKSLA R+S LL
Sbjct:    6 SPSVAQVQIESHVFPPTVKPPGTSKPFFLGGAGERGLEIQGKFIKFTAIGVYLEDSAIPSLAVKWKGKTAEELTDSVDFFRDIVSGPFEKFTQVTMILPLTGQQYSEKVTENCVAYWKAVGTYTDAEAKAIEKFIEVFKDETFPPGGSILFTQSPLGSLTIAFSKDGSLPETGTVVMENKQLSEAVLESIIGKHGVSPAAKKSLAARMSELL 217          
BLAST of CF834080 vs. ExPASy Swiss-Prot
Match: CFI_GOSHI (Chalcone--flavonone isomerase OS=Gossypium hirsutum GN=CHI PE=2 SV=1)

HSP 1 Score: 322.783 bits (826), Expect = 1.661e-87
Identity = 167/213 (78.40%), Postives = 184/213 (86.38%), Query Frame = -2
Query:  254 SPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQS-PGSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLN 889
            S SVTELQVEN TF P+V+PPGSTK+ FLGGAGERGLEI+GKF+KFTAIGVYLED AV  L  KWKGK+A ELTESVEFFRDVVTG FEKF++VTMILPLTG QYSEKV+ENC+AIWK  GIYTDAEAKAIEKF EVFKDE FPPGSSILFT S  GSLTI FSKD S+P+ G  VIE+ LL+ +VLES+IGKNGVSPAAK+SLA RLS L N
Sbjct:    4 SLSVTELQVENFTFPPTVKPPGSTKTLFLGGAGERGLEIQGKFIKFTAIGVYLEDSAVNCLGVKWKGKSAVELTESVEFFRDVVTGDFEKFIRVTMILPLTGQQYSEKVSENCVAIWKSLGIYTDAEAKAIEKFIEVFKDENFPPGSSILFTISGQGSLTIGFSKDSSVPEGGKVVIENKLLANSVLESVIGKNGVSPAAKESLASRLSPLFN 216          
BLAST of CF834080 vs. ExPASy Swiss-Prot
Match: CFI_PYRCO (Chalcone--flavonone isomerase OS=Pyrus communis GN=CHI PE=2 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 2.834e-87
Identity = 164/214 (76.64%), Postives = 185/214 (86.45%), Query Frame = -2
Query:  254 PSPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLN 892
            P PS+  LQVE   F PSV+PPGS+ + FLGGAG RGLEI+G FVKFTAIGVYLED+AVPLLA KWKGKTAEEL+ESVEFFRD+VTGPFEKF++VT ILPLTG QYSEKV+ENC+A WK  GIYTDAE KAIEKF EVFKD+ FPPG+SILFTQSP GSLTI FSKD S+P+   AVIE+ LLSEAVLES++GK+GVSPAAK+SLA RLS LLN
Sbjct:    3 PPPSLAGLQVEATAFPPSVKPPGSSNTLFLGGAGVRGLEIQGNFVKFTAIGVYLEDNAVPLLAVKWKGKTAEELSESVEFFRDIVTGPFEKFIQVTTILPLTGQQYSEKVSENCVAFWKSVGIYTDAEGKAIEKFIEVFKDQNFPPGASILFTQSPKGSLTICFSKDASVPEAANAVIENKLLSEAVLESILGKHGVSPAAKRSLAARLSELLN 216          
BLAST of CF834080 vs. ExPASy Swiss-Prot
Match: CFI2_VITVI (Chalcone--flavonone isomerase 2 OS=Vitis vinifera GN=CHI2 PE=3 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 8.245e-87
Identity = 164/212 (77.36%), Postives = 181/212 (85.38%), Query Frame = -2
Query:  260 PSPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSAL 892
            P PSVT +QVENV F PSV+PPGST   FLGGAG RGLEI+GKFVKFTAIGVYLE  AVP LA KWKGKT EEL +SV+FFRDVVTGPFEKF KVT ILPLTG QYS+KV+ENC+A WK  GIYTDAEAKAIEKF EV KDE FPPG+SILFT SP G+LT+SFSKDGS+P+ G AVIE+ LL+EAVLES+IGK+GVSP AKKSLA RLS L
Sbjct:    3 PVPSVTAVQVENVLFPPSVKPPGSTNDLFLGGAGVRGLEIQGKFVKFTAIGVYLESSAVPTLAVKWKGKTVEELADSVDFFRDVVTGPFEKFTKVTTILPLTGRQYSDKVSENCVAFWKSVGIYTDAEAKAIEKFNEVLKDETFPPGNSILFTHSPLGALTMSFSKDGSLPEVGNAVIENKLLTEAVLESIIGKHGVSPEAKKSLAARLSEL 214          
BLAST of CF834080 vs. ExPASy Swiss-Prot
Match: CFI1_VITVI (Chalcone--flavonone isomerase 1 OS=Vitis vinifera GN=CHI1 PE=2 SV=1)

HSP 1 Score: 318.931 bits (816), Expect = 2.399e-86
Identity = 163/210 (77.62%), Postives = 181/210 (86.19%), Query Frame = -2
Query:  260 PSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSAL 886
            PSVT +QVENV F PSV+PPGST   FLGGAG RGLEI+GKFVKFTAIGVYLE+ AVP LA KWKGKT EEL +SV+FFRDVVTGPFEKF KVT ILPLTG QYS+KV+ENC+A WK  GIYTDAEAKAIEKF EV KDE FPPG+SILFT SP G+LT+SFSKDGS+P+ G AVIE+ LL+EAVLES+IGK+GVSP AKKSLA RLS L
Sbjct:    5 PSVTAVQVENVLFPPSVKPPGSTNDLFLGGAGVRGLEIQGKFVKFTAIGVYLENSAVPTLAVKWKGKTVEELADSVDFFRDVVTGPFEKFTKVTTILPLTGRQYSDKVSENCVAFWKSVGIYTDAEAKAIEKFNEVLKDETFPPGNSILFTHSPLGALTMSFSKDGSLPEVGNAVIENKLLTEAVLESIIGKHGVSPEAKKSLAARLSEL 214          
BLAST of CF834080 vs. ExPASy Swiss-Prot
Match: CFI1_FRAAN (Chalcone--flavonone isomerase 1 OS=Fragaria ananassa GN=CHI1 PE=2 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 5.344e-86
Identity = 162/210 (77.14%), Postives = 183/210 (87.14%), Query Frame = -2
Query:  257 SVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALL 883
            SVT +Q+  ++F PSV+PPGS  + FLGGAG RG+EI+G FVKFTAIGVYLED AVP LA KWKGKTAEELTESVEFFR++VTGPFEKF +VTMILPLTG QYSEKV+ENC+AIWK FGIYTDAEAKAIEKF EVFKD+ FPPG+SILFTQSP GSLTI FSKDG IP+ G AVIE+ LLSE+VLES+IGK GVSP A+KS+A RLS LL
Sbjct:    4 SVTGIQIGGMSFPPSVKPPGSGNTFFLGGAGVRGMEIQGNFVKFTAIGVYLEDKAVPALAVKWKGKTAEELTESVEFFREIVTGPFEKFTQVTMILPLTGQQYSEKVSENCVAIWKKFGIYTDAEAKAIEKFIEVFKDQTFPPGASILFTQSPDGSLTIGFSKDGCIPEVGNAVIENKLLSESVLESIIGKPGVSPEARKSVATRLSELL 213          
BLAST of CF834080 vs. ExPASy Swiss-Prot
Match: CFI_ELAUM (Chalcone--flavonone isomerase OS=Elaeagnus umbellata GN=CHI PE=2 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 4.524e-85
Identity = 159/214 (74.30%), Postives = 186/214 (86.92%), Query Frame = -2
Query:  245 SVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLNVTS 883
            SVTE+QVE+V F P V+PPGS+K+ FLGGAG RG+EI+GKF+KFTAIGVYLED+AVP LA KWKGK+A+ELTESVEFFRD+VTGP EKF +VT ILPLTG QYSEKV+ENC+A WK  GIY+DAEAKAIEKF E+FKD+ FPP +S LFTQSP GSLT+SFSKDGSIP+ G AV+E+ LLSEAVLES+IGK+GVSP AK++LA RL  LLN  S
Sbjct:    7 SVTEVQVESVIFPPEVKPPGSSKTLFLGGAGVRGIEIQGKFIKFTAIGVYLEDNAVPSLAVKWKGKSAQELTESVEFFRDIVTGPMEKFTRVTTILPLTGQQYSEKVSENCVAAWKSLGIYSDAEAKAIEKFIEIFKDQTFPPAASNLFTQSPLGSLTMSFSKDGSIPEVGNAVLENKLLSEAVLESIIGKHGVSPEAKQNLATRLVQLLNENS 220          
BLAST of CF834080 vs. ExPASy Swiss-Prot
Match: CFI2_FRAAN (Chalcone--flavonone isomerase 2 OS=Fragaria ananassa GN=CHI2 PE=2 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 2.245e-84
Identity = 159/210 (75.71%), Postives = 181/210 (86.19%), Query Frame = -2
Query:  257 SVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALL 883
            SVT +Q+   +F P+V+PPGS  + FLGGAG RG+EI+G FVKFTAIGVYLED AVP L+ KWKGKTAEELTESVEFFR++VTGPFEKF +VTMILPLTG QYSEKV+ENC+AIWK FGIYTDAEAKAIEKF EVFKD+ FPPG+SILFTQSP GSL I  SKDGSIP+ G AVIE+ LLSE+VLES+IGK GVSP A+KS+A RLS LL
Sbjct:    4 SVTGIQIGGTSFPPAVKPPGSGNTLFLGGAGVRGMEIQGNFVKFTAIGVYLEDKAVPALSVKWKGKTAEELTESVEFFREIVTGPFEKFTQVTMILPLTGQQYSEKVSENCVAIWKKFGIYTDAEAKAIEKFIEVFKDQTFPPGASILFTQSPNGSLMIGISKDGSIPEVGNAVIENKLLSESVLESIIGKQGVSPEARKSVATRLSELL 213          
BLAST of CF834080 vs. ExPASy Swiss-Prot
Match: CFI2_LOTJA (Chalcone--flavonone isomerase 2 OS=Lotus japonicus GN=CHI2 PE=2 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 3.585e-82
Identity = 157/211 (74.41%), Postives = 177/211 (83.89%), Query Frame = -2
Query:  260 PSVTELQVENVTFTPS-VQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSAL 886
            PSVT LQVENV F P+ ++PP S  + FLGGAGERGL I+ KFVKFTAIG+YL+D AVP LA KWKGK  +ELTESV+FFRD+VTGPFEKFM+VTMILPLTG QYSEKV+ENC+AIWK  GIYTD E KAI+KF  VFKD+ FPPGSSILFT  P GSL ISFSKDGSIP+   AVI++ LLSEAVLESMIG +GVSPAAK+SLA RLS L
Sbjct:    4 PSVTALQVENVAFPPTLIKPPASANTLFLGGAGERGLHIQDKFVKFTAIGIYLQDTAVPSLAVKWKGKPVDELTESVQFFRDIVTGPFEKFMQVTMILPLTGQQYSEKVSENCVAIWKHLGIYTDEEGKAIDKFVSVFKDQTFPPGSSILFTVLPKGSLAISFSKDGSIPEVESAVIDNKLLSEAVLESMIGAHGVSPAAKQSLASRLSEL 214          
The following BLAST results are available for this feature:
BLAST of CF834080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CFI_CITSI1.944e-120100.00Chalcone--flavonone isomerase OS=Citrus sinensis G... [more]
CFI_CAMSI1.272e-8775.47Chalcone--flavonone isomerase OS=Camellia sinensis... [more]
CFI_GOSHI1.661e-8778.40Chalcone--flavonone isomerase OS=Gossypium hirsutu... [more]
CFI_PYRCO2.834e-8776.64Chalcone--flavonone isomerase OS=Pyrus communis GN... [more]
CFI2_VITVI8.245e-8777.36Chalcone--flavonone isomerase 2 OS=Vitis vinifera ... [more]
CFI1_VITVI2.399e-8677.62Chalcone--flavonone isomerase 1 OS=Vitis vinifera ... [more]
CFI1_FRAAN5.344e-8677.14Chalcone--flavonone isomerase 1 OS=Fragaria ananas... [more]
CFI_ELAUM4.524e-8574.30Chalcone--flavonone isomerase OS=Elaeagnus umbella... [more]
CFI2_FRAAN2.245e-8475.71Chalcone--flavonone isomerase 2 OS=Fragaria ananas... [more]
CFI2_LOTJA3.585e-8274.41Chalcone--flavonone isomerase 2 OS=Lotus japonicus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04O02_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04O02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834080 ID=CF834080; Name=CF834080; organism=Citrus sinensis; type=EST; length=893bp
TTTTTATTGGTAAGAGTCTGTATATTCAACCAGTACAAAGAACAGGAAAA
ACTTGTTCAGGGACATCAGCATTCGAAAATTAACTCAGAATTTGGGAGCT
CTAGCTCTCACAAAGGCAACACAACTGAGAGTCCATAGGAAAGGACACTA
ATTTAACATTAAAGAAAAAAAAGTTTGCCAATTTAACAACTCTGCCTTCG
CTTATTATTTGGCAAACTTTTCAACTTCTTCATTTCATCTTATCACTAGT
TACATTCAACAGTGCTGATAGTCTTTCAGCCAAACTCTTCTTTGCTGCAG
GAGAAACACCATTCTTGCCGATCATCGACTCCAGTACTGCCTCAGAAAGC
AGATTACTCTCTATTACCGCAACACCATCTTTCGGTATTGAACCGTCTTT
GGAGAAGCTGATAGTCAATGATCCTGGTGATTGAGTAAAGAGAATTGAGG
ATCCTGGTGGGAAAATTTCATCCTTGAAGACCTCAGTGAATTTTTCAATA
GCTTTGGCTTCAGCATCAGTGTAAATTCCAAAAAATTTCCATATGGCAAT
GCAATTTTCGGCAACCTTCTCTGAGTATTGTGCGCCAGTTAATGGCAAGA
TCATTGTCACCTTCATGAATTTCTCAAAGGGACCTGTGACGACGTCTCTG
AAGAACTCAACGGATTCCGTCAACTCCTCTGCAGTCTTCCCCTTCCATTT
GCCGGCGAGTAACGGCACGGCGTCATCCTCCAAGTACACTCCTATCGCCG
TGAACTTCACGAACTTCCCTTCAATCTCCAATCCTCTCTCCCCTGCGCCG
CCGAGGAAATGCGACTTTGTTGATCCTGGAGGTTGCACGGACGGCGTGAA
AGTGACGTTCTCGACCTGCAGTTCGGTGACGGACGGTGAGGGC
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