CF834082

Overview
NameCF834082
Unique NameCF834082
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length588
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1058 contig Csv1_Contig1058:1..588. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834082 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 9.177e-20
Identity = 43/98 (43.88%), Postives = 63/98 (64.29%), Query Frame = -3
Query:  179 WMLHNFDDEQTLKLLKNCYKALPDGGKLLNINSTISEVPQNSAASREISILDTILLIQIPHGRERTKQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 472
            W+ H++ DE  LK LKNCY+ALPD GK++     +   P +S A++ +  +D I+L   P G+ERT++E+ +LA  AGF+G    C   N Y+MEFLK
Sbjct:  266 WICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFLK 363          
BLAST of CF834082 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 5.948e-19
Identity = 44/98 (44.90%), Postives = 62/98 (63.27%), Query Frame = -3
Query:  179 WMLHNFDDEQTLKLLKNCYKALPDGGKLLNINSTISEVPQNSAASREISILDTILLIQIPHGRERTKQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 472
            W+ H++ DE  LK LKNCY ALPD GK++     +   P +S A++ +  +D I+L   P G+ERT+QE+  LA  AGF+G +  C   N YV+EFLK
Sbjct:  266 WICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTEQEFQALAKGAGFQGFNVACSAFNTYVIEFLK 363          
BLAST of CF834082 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.015e-18
Identity = 45/98 (45.92%), Postives = 61/98 (62.24%), Query Frame = -3
Query:  179 WMLHNFDDEQTLKLLKNCYKALPDGGKLLNINSTISEVPQNSAASREISILDTILLIQIPHGRERTKQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 472
            W+ H++ DE  LK LKNCY ALP+ GK++     +   P  S A++ +  +D I+L   P G+ERT++E+  LAI AGFKG    C   N YVMEFLK
Sbjct:  271 WICHDWSDEHCLKFLKNCYAALPEHGKVIVAECILPLSPDPSLATKGVIHIDAIMLAHNPGGKERTEKEFEALAIGAGFKGFKVACCAFNTYVMEFLK 368          
BLAST of CF834082 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.325e-18
Identity = 42/98 (42.86%), Postives = 61/98 (62.24%), Query Frame = -3
Query:  179 WMLHNFDDEQTLKLLKNCYKALPDGGKLLNINSTISEVPQNSAASREISILDTILLIQIPHGRERTKQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 472
            W+ H++ DE  LK LKNCY ALPD GK++     +   P  S A++ +  +D ++L   P G+ERT+QE+  LA  +GF+G+   C   N YV+EFLK
Sbjct:  266 WICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDTSLATKGVVHIDVVMLAHNPGGKERTEQEFEALAKGSGFQGIRVACNAFNTYVIEFLK 363          
BLAST of CF834082 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.952e-18
Identity = 42/98 (42.86%), Postives = 62/98 (63.27%), Query Frame = -3
Query:  179 WMLHNFDDEQTLKLLKNCYKALPDGGKLLNINSTISEVPQNSAASREISILDTILLIQIPHGRERTKQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 472
            W+ H++ DE  LKLLKNCY ALP+ GK++     + EVP +S A++ +  +D I +   P G+ERT++E+  LA  AGF+G    C   N Y++EF K
Sbjct:  242 WICHDWSDEHCLKLLKNCYDALPNNGKVILAECILPEVPDSSLATKGVVHIDVITVAHNPGGKERTEKEFEALAKAAGFQGFQVFCNAFNTYIIEFSK 339          
BLAST of CF834082 vs. ExPASy Swiss-Prot
Match: OMT1_CHRAE (Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.952e-18
Identity = 42/98 (42.86%), Postives = 62/98 (63.27%), Query Frame = -3
Query:  179 WMLHNFDDEQTLKLLKNCYKALPDGGKLLNINSTISEVPQNSAASREISILDTILLIQIPHGRERTKQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 472
            W+ H++ DE  LKLLKNCY ALP+ GK++     + EVP +S A++ +  +D I +   P G+ERT++E+  LA  AGF+G    C   N Y++EF K
Sbjct:  242 WICHDWSDEHCLKLLKNCYDALPNNGKVILAECILPEVPDSSLATKGVVHIDVITVAHNPGGKERTEKEFEALAKAAGFQGFQVFCNAFNTYIIEFSK 339          
BLAST of CF834082 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.263e-17
Identity = 41/98 (41.84%), Postives = 60/98 (61.22%), Query Frame = -3
Query:  179 WMLHNFDDEQTLKLLKNCYKALPDGGKLLNINSTISEVPQNSAASREISILDTILLIQIPHGRERTKQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 472
            W+ H++ DE  L+LLKNCY ALP+ GK++ +   +   P  S A++ +  +D I+L   P G+ERT +E+  LA  AGFKG    C   N +V+EF K
Sbjct:  265 WICHDWSDEHCLRLLKNCYDALPENGKVILVECILPVAPDTSLATKGVMHVDAIMLAHNPGGKERTDKEFEGLARGAGFKGFEVMCCAFNTHVIEFRK 362          
BLAST of CF834082 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.263e-17
Identity = 40/98 (40.82%), Postives = 62/98 (63.27%), Query Frame = -3
Query:  179 WMLHNFDDEQTLKLLKNCYKALPDGGKLLNINSTISEVPQNSAASREISILDTILLIQIPHGRERTKQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 472
            W+LH++ D   L++LKNCYK+LP+ GK++     + E P  + A++ +  +D I+L   P G+ERT++E+  LA  AGFKG +      N +VMEF K
Sbjct:  257 WILHDWSDAHCLQVLKNCYKSLPENGKVIVAECILPEAPDTTPATQNVIHIDVIMLAHNPGGKERTEKEFEALAKGAGFKGFNKAACALNTWVMEFCK 354          
BLAST of CF834082 vs. ExPASy Swiss-Prot
Match: IEMT_CLABR ((Iso)eugenol O-methyltransferase OS=Clarkia breweri GN=IEMT1 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 5.567e-17
Identity = 42/98 (42.86%), Postives = 60/98 (61.22%), Query Frame = -3
Query:  179 WMLHNFDDEQTLKLLKNCYKALPDGGKLLNINSTISEVPQNSAASREISILDTILLIQIPHGRERTKQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 472
            W+ H++ DE  LKLLKNCY ALPD GK++     +   P  S A++ +   D ++L   P G+ERT++E+  LA+ +GF+G        N YVMEFLK
Sbjct:  269 WICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGFKVASCAFNTYVMEFLK 366          
BLAST of CF834082 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 7.271e-17
Identity = 39/98 (39.80%), Postives = 59/98 (60.20%), Query Frame = -3
Query:  179 WMLHNFDDEQTLKLLKNCYKALPDGGKLLNINSTISEVPQNSAASREISILDTILLIQIPHGRERTKQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 472
            W+ H++ D+   KLLKNCY+ALPD GK++     + E P  S A++ +  +D ++L   P G+ERT++E+  LA  AGFK     C   N ++ME  K
Sbjct:  253 WICHDWSDDHCRKLLKNCYQALPDNGKVILAECVLPEAPDTSLATQNVVHVDVVMLAHNPGGKERTEKEFEALAKGAGFKEFRKVCSAVNTWIMELCK 350          
The following BLAST results are available for this feature:
BLAST of CF834082 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
COMT1_MEDSA9.177e-2043.88Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_PRUDU5.948e-1944.90Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_CLABR1.015e-1845.92Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
COMT1_ROSCH1.325e-1842.86Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
OMT2_CHRAE2.952e-1842.86Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]
OMT1_CHRAE2.952e-1842.86Quercetin 3-O-methyltransferase 1 OS=Chrysospleniu... [more]
COMT3_POPKI4.263e-1741.84Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
COMT1_ZINEL4.263e-1740.82Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]
IEMT_CLABR5.567e-1742.86(Iso)eugenol O-methyltransferase OS=Clarkia brewer... [more]
COMT1_COFCA7.271e-1739.80Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04O03_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04O03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834082 ID=CF834082; Name=CF834082; organism=Citrus sinensis; type=EST; length=588bp
TTTTTTTTTTTTTTACGGGAATCAATCTCCCTATAAGAGATTTATCATTG
ATAAAACGAAAGAGATTACATAAGAGAAGCCCTCAATCCAAAGGAAAGAG
ATAACAAGACAAACCGGAAATTGAAAACAACCCAAGAAAGCTAAGGAGAT
CTTTCCGAATAGAGAAAAAAGCAATCTATTTCAAGAACTCCATAACATAT
AAATTACATACACCACATTCGTAGCTGACACCTTTAAATCCAGCTTTAAT
TGCCAATTCATTGTATTCTTGTTTGGTGCGCTCTCTTCCATGAGGAATTT
GGATCAACAAAATTGTATCCAAAATAGAGATTTCCCTTGAAGCCGCACTA
TTTTGAGGCACTTCTGAAATTGTTGAATTAATATTGAGCAGCTTCCCACC
ATCTGGAAGAGCTTTGTAACAATTCTTCAACAATTTCAAAGTTTGCTCAT
CATCAAAATTGTGAAGCATCCAACTTTTTCCGGTATACTATTTTTGAGTT
TTATTGTTTTTTTTTCGATTTTCATAATATCTTGTTATCCTTTTGAGTTT
TTCAATGAAAAAATTGACGTCAAATGAGTAAATTGTCC
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