CF834085
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RB11C_LOTJA (Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1) HSP 1 Score: 343.199 bits (879), Expect = 9.951e-94 Identity = 175/201 (87.06%), Postives = 180/201 (89.55%), Query Frame = 2 Query: 197 MASRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEIYHXXXXXXXXXXXXXXXXXXPGQGTTIN 799 MA RVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV RWLRELRDHADSNIVIMMAGNKSDLNHLRAV+E+DG +L+EKEGLSFLETSALEATN+EKAFQTILTEIYH PGQGTTIN Sbjct: 1 MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQEATAGASVPGQGTTIN 201
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1) HSP 1 Score: 338.576 bits (867), Expect = 2.451e-92 Identity = 175/201 (87.06%), Postives = 179/201 (89.05%), Query Frame = 2 Query: 197 MASRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEIYHXXXXXXXXXXXXXXXXXXPGQGTTIN 799 MA+RVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV RWLRELRDHADSNIVIMMAGNKSDL HLRAV+EEDG +LAEKEGLSFLETSALEA N+EKAFQTILTEIYH PGQGTTIN Sbjct: 1 MANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYH--IISKKALAAQEASSNLPGQGTTIN 199
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RAA2C_ARATH (Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2 SV=4) HSP 1 Score: 334.339 bits (856), Expect = 4.622e-91 Identity = 174/202 (86.14%), Postives = 176/202 (87.13%), Query Frame = 2 Query: 197 MASRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEIYH-XXXXXXXXXXXXXXXXXXPGQGTTIN 799 M RVD EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRT QVEGKT+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLR+V EEDG SLAEKEGLSFLETSALEATNVEKAFQTIL EIYH PGQGTTIN Sbjct: 1 MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKKALAAQEAAAANSAIPGQGTTIN 202
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RB11A_TOBAC (Ras-related protein Rab11A OS=Nicotiana tabacum GN=RAB11A PE=2 SV=1) HSP 1 Score: 325.865 bits (834), Expect = 1.644e-88 Identity = 165/201 (82.09%), Postives = 175/201 (87.06%), Query Frame = 2 Query: 197 MASRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEIYHXXXXXXXXXXXXXXXXXXPGQGTTIN 799 MA+RVDHEYDYLFK+VLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALL YDITKRQTFDNV RWLRELRDH DSNIVI++AGNKSDL HLRAV+E+D +L +KEGLSFLETSALEA NV+KAFQTILT+IYH PGQGTTIN Sbjct: 1 MANRVDHEYDYLFKMVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVIILAGNKSDLKHLRAVSEQDDQALVKKEGLSFLETSALEALNVDKAFQTILTDIYHIISKKALAAQEAAASTALPGQGTTIN 201
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RAA2A_ARATH (Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2 SV=1) HSP 1 Score: 299.286 bits (765), Expect = 1.648e-80 Identity = 148/174 (85.06%), Postives = 160/174 (91.95%), Query Frame = 2 Query: 197 MASRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEIY 718 MA R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+TVKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK TF+NV RWL+ELRDHADSNIVIM+ GNK+DL HLRAV ED S AEKEGLSF+ETSALEA NVEKAFQTIL+E+Y Sbjct: 1 MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVY 174
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RGP2_ORYSJ (Ras-related protein RGP2 OS=Oryza sativa subsp. japonica GN=RGP2 PE=2 SV=2) HSP 1 Score: 298.13 bits (762), Expect = 3.671e-80 Identity = 147/174 (84.48%), Postives = 163/174 (93.68%), Query Frame = 2 Query: 197 MASRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEIY 718 M RVDHEY YLFK+VLIGDSGVGKSNILSRFTRN F L+SKSTIGVEFAT++LQ+EGKT+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQ+FDNV RWLRELRDHADS+IVIMM GNKSDL HLRAV+E++G +LAEKEGL FLETSA+EA NVE+AFQTI+TE+Y Sbjct: 1 MGGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMVGNKSDLIHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVY 174
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: YPTC6_CHLRE (Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii GN=YPTC6 PE=3 SV=1) HSP 1 Score: 285.804 bits (730), Expect = 1.885e-76 Identity = 141/175 (80.57%), Postives = 157/175 (89.71%), Query Frame = 2 Query: 197 MASRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEIYH 721 M+ + D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK TF+NV RWL+ELRDHADSNIVIM+ GNKSDL HLR V E + E+EGLSF+ETSALE+TNVEKAFQ ILTEIYH Sbjct: 1 MSHKPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVIMLVGNKSDLKHLRDVQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYH 175
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RB11A_RAT (Ras-related protein Rab-11A OS=Rattus norvegicus GN=Rab11a PE=1 SV=3) HSP 1 Score: 281.182 bits (718), Expect = 4.644e-75 Identity = 138/169 (81.66%), Postives = 154/169 (91.12%), Query Frame = 2 Query: 212 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEIY 718 D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GNKSDL HLRAV ++ + AEK GLSF+ETSAL++TNVE AFQTILTEIY Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 173
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RB11A_RABIT (Ras-related protein Rab-11A OS=Oryctolagus cuniculus GN=RAB11A PE=2 SV=3) HSP 1 Score: 281.182 bits (718), Expect = 4.644e-75 Identity = 138/169 (81.66%), Postives = 154/169 (91.12%), Query Frame = 2 Query: 212 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEIY 718 D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GNKSDL HLRAV ++ + AEK GLSF+ETSAL++TNVE AFQTILTEIY Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 173
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RB11A_PONAB (Ras-related protein Rab-11A OS=Pongo abelii GN=RAB11A PE=2 SV=3) HSP 1 Score: 281.182 bits (718), Expect = 4.644e-75 Identity = 138/169 (81.66%), Postives = 154/169 (91.12%), Query Frame = 2 Query: 212 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEIY 718 D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GNKSDL HLRAV ++ + AEK GLSF+ETSAL++TNVE AFQTILTEIY Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 173 The following BLAST results are available for this feature:
BLAST of CF834085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834085 ID=CF834085; Name=CF834085; organism=Citrus sinensis; type=EST; length=799bpback to top |