CF834165

Overview
NameCF834165
Unique NameCF834165
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length591
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF834165 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 60.4622 bits (145), Expect = 4.141e-13
Identity = 32/94 (34.04%), Postives = 49/94 (52.13%), Query Frame = 2 
Query:  308 RYPHDVNLRFPVKVSVKPCN--E*PLWKDDSYDDP----LIVTGGSEGHPRAETLLNWFKIEKAGNFSYGGVYNIDHCPRVCLSCPIRCNKIGV 571
            R   D+N+ F    +  PC      +W+ D YD+      +  GG +G+P  ET+ +WFKIE+   F   G Y +  CP VC SC ++C  +G+
Sbjct:  106 RVSTDLNINFS---AFMPCRWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEE---FCGSGFYKLVFCPTVCGSCKVKCGDVGI 193

HSP 2 Score: 33.113 bits (74), Expect = 4.141e-13
Identity = 24/66 (36.36%), Postives = 34/66 (51.52%), Query Frame = 1 
Query:   58 MLTLATQPLLGISSNS-EPVLHIIGNKGKSTLEYKLIPVLNGARGFITHLGT--NGQ--CPLDVIQ 240
            +L  A  PLL  + ++  PVL I G K ++   Y ++PVL    G +T   T  NG   CP  V+Q
Sbjct:   17 LLAAAANPLLSAADSAPNPVLDIDGEKLRTGTNYYIVPVLRDHGGGLTVSATTPNGTFVCPPRVVQ 82
The following BLAST results are available for this feature:
BLAST of CF834165 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MIRA_RICDU4.141e-1334.04Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_05A19_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05A19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834165 ID=CF834165; Name=CF834165; organism=Citrus sinensis; type=EST; length=591bp
CAGTCTTCCCCCCCTAAAAAAATGAAGACTTCATTGATAACAACACTCTC
CCCCCTTATGCTTACCTTGGCCACCCAGCCACTATTGGGCATCTCATCAA
ACTCTGAACCTGTCTTACATATCATTGGAAACAAGGGCAAATCCACCCTC
GAGTATAAACTTATCCCAGTCCTAAATGGCGCCAGAGGATTCATCACACA
CCTAGGCACAAATGGACAGTGTCCCTTGGACGTTATCCAATTAAGTTCTC
CTAACGAAAGGGGAGATAATTAAAAATCACTTCCGTACTACAATTACAAA
ATTGTCAAGGTATCCACATGATGTCAACCTGAGATTCCCCGTAAAAGTTT
CTGTTAAGCCCTGTAATGAATAACCATTGTGGAAAGATGATAGCTATGAC
GATCCATTAATTGTAACCGGCGGAAGTGAGGGCCACCCACGAGCTGAAAC
GTTGCTAAATTGGTTTAAGATTGAAAAAGCTGGAAATTTTTCATATGGAG
GCGTATACAATATTGACCATTGTCCGAGAGTCTGTCTATCTTGCCCTATA
CGCTGCAACAAAATTGGCGTTTCAACTAAGGATGGCGTTCG
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