CF834252
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834252 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 1.224e-50 Identity = 85/134 (63.43%), Postives = 107/134 (79.85%), Query Frame = -2 Query: 163 GRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIISGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLD*YNQGPYGHNL 564 GRGP+QL+WN NY +CG A+GVDLLNNPDLL++DP +SFKSA WFWMT Q PKPSCH VII W PS++D A R+PGYG+ TNII+GG+ECGKGWN+ V +RIGF+ +C G+ G+NLD YNQ P+G+ + Sbjct: 186 GRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRVPGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSYGNNLDCYNQSPFGNGV 319
BLAST of CF834252 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 4.652e-50 Identity = 86/132 (65.15%), Postives = 104/132 (78.79%), Query Frame = -2 Query: 169 GRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIISGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLD*YNQGPYGH 564 GRGP+QLTWN NY +CG A+GVDLLNNPDLLATDP +SFKSA WFWMT Q PKPSCH+VII W PS +D A R+PG+GL TNII+GG+ECG+GWN+ V +RIGF+ +C G+ G+NLD YNQ Y + Sbjct: 183 GRGPMQLTWNYNYGQCGRAIGVDLLNNPDLLATDPTISFKSAFWFWMTPQSPKPSCHDVIIGAWSPSGSDQAAGRVPGFGLITNIINGGLECGQGWNAKVEDRIGFYKRYCDTLGVGYGNNLDCYNQRSYNN 314
BLAST of CF834252 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2) HSP 1 Score: 195.282 bits (495), Expect = 1.768e-49 Identity = 84/134 (62.69%), Postives = 105/134 (78.36%), Query Frame = -2 Query: 163 GRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIISGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLD*YNQGPYGHNL 564 GRGP+QL+WN NY +CG A+GVDLLNNPDLL++DP +SFKSA WFWMT Q PKPSCH VII W PS++D A R GYG+ TNII+GG+ECGKGWN+ V +RIGF+ +C G+ G+NLD YNQ P+G+ + Sbjct: 164 GRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRATGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSYGNNLDCYNQSPFGNGV 297
BLAST of CF834252 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2) HSP 1 Score: 194.897 bits (494), Expect = 2.309e-49 Identity = 87/134 (64.93%), Postives = 107/134 (79.85%), Query Frame = -2 Query: 163 GRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIISGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLD*YNQGPYGHNL 564 GRGPIQ++WN NY +CG A+GVDLLNNPDL+ATDPV+SFK+A+WFWMT Q PKPSCH+VI W PS+ D A RLPGYG TNII+GG+ECG+G +S V +RIGF+ +C FGI GDNLD Y+Q P+G +L Sbjct: 178 GRGPIQISWNYNYGQCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVITGGWTPSSADRAAGRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFYKRYCDIFGIGYGDNLDCYSQRPFGSSL 311
BLAST of CF834252 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2) HSP 1 Score: 192.971 bits (489), Expect = 8.773e-49 Identity = 86/135 (63.70%), Postives = 108/135 (80.00%), Query Frame = -2 Query: 160 GRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIISGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLD*YNQGPYGHNLM 564 GRGPIQ++ N NY CG A+GVDLLNNPDL+ATDPV+SFKSA+WFWMT Q PKPSCH+VII W+PSA D A+RLPG+G+ TNII+GG+ECG+G +S V +RIGF+ +C G+ PGDNLD NQ +G+ L+ Sbjct: 191 GRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSAGDRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDCGNQRSFGNGLL 325
BLAST of CF834252 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3) HSP 1 Score: 192.2 bits (487), Expect = 1.496e-48 Identity = 85/135 (62.96%), Postives = 106/135 (78.52%), Query Frame = -2 Query: 160 GRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIISGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLD*YNQGPYGHNLM 564 GRGP+QL+WN NY CG A+GVDLLNNPDL+A D V++FK+AIWFWMTAQPPKPSCH VI +W+PS D A RLPGYG+ TNII+GG+ECG+G + VA+RIGF+ +C FG+ PG NLD YNQ + + L+ Sbjct: 197 GRGPMQLSWNYNYGLCGRAIGVDLLNNPDLVANDAVIAFKAAIWFWMTAQPPKPSCHAVIAGQWQPSDADRAAGRLPGYGVITNIINGGLECGRGQDGRVADRIGFYQRYCNIFGVNPGGNLDCYNQRSFVNGLL 331
BLAST of CF834252 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 3.334e-48 Identity = 85/135 (62.96%), Postives = 108/135 (80.00%), Query Frame = -2 Query: 160 GRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIISGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLD*YNQGPYGHNLM 564 GRGPIQ++ N NY CG A+GVDLLNNPDL+ATDPV+SFKSA+WFWMT Q PKPSCH+VII W+PS+ D A+RLPG+G+ TNII+GG+ECG+G +S V +RIGF+ +C G+ PGDNLD NQ +G+ L+ Sbjct: 186 GRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSSADRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDCGNQRSFGNGLL 320
BLAST of CF834252 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 4.354e-48 Identity = 85/135 (62.96%), Postives = 107/135 (79.26%), Query Frame = -2 Query: 160 GRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIISGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLD*YNQGPYGHNLM 564 GRGPIQ++WN NY +CG A+GVDLLN PDL+ATD V+SFKSA+WFWMTAQ PKPS H+VI W PS+ DV A RLPGYG TNII+GG+ECG+G +S V +RIGFF +C G+ G+NLD Y+Q P+G++L+ Sbjct: 186 GRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNLDCYSQTPFGNSLL 320
BLAST of CF834252 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 4.354e-48 Identity = 84/131 (64.12%), Postives = 104/131 (79.39%), Query Frame = -2 Query: 172 GRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIISGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLD*YNQGPYG 564 GRGP+QL+WN NY CGEAL V+LL NPDL+ATD VLSFK+A+WFWMT Q PKPSCH+V+ W+PSA D A RLPGYG+ TN+++GG+ECGKG N VA+R+GFF +CG G+ G+NLD YNQ P+G Sbjct: 113 GRGPLQLSWNYNYGPCGEALRVNLLGNPDLVATDRVLSFKTALWFWMTPQAPKPSCHDVLTGRWQPSAADTAAGRLPGYGVLTNLLNGGLECGKGPNPQVADRLGFFRRYCGLLGVGTGNNLDCYNQRPFG 243
BLAST of CF834252 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 7.427e-48 Identity = 85/134 (63.43%), Postives = 106/134 (79.10%), Query Frame = -2 Query: 163 GRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIISGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLD*YNQGPYGHNL 564 GRGPIQ++WN NY +CG A+GVDLLN PDL+ATD V+SFKSA+WFWMTAQ PKPS H+VI W PS+ DV A RLPGYG TNII+GG+ECG+G +S V +RIGFF +C G+ G+NLD Y+Q P+G++L Sbjct: 185 GRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNLDCYSQTPFGNSL 318 The following BLAST results are available for this feature:
BLAST of CF834252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834252 ID=CF834252; Name=CF834252; organism=Citrus sinensis; type=EST; length=565bpback to top |