CF834304
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834304 vs. ExPASy Swiss-Prot
Match: TPIC_FRAAN (Triosephosphate isomerase, chloroplastic OS=Fragaria ananassa GN=TPI PE=2 SV=1) HSP 1 Score: 283.878 bits (725), Expect = 6.147e-76 Identity = 135/156 (86.54%), Postives = 151/156 (96.79%), Query Frame = -1 Query: 263 RHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAAFRDWLKNNVSAEVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNSVTSKKVA 730 RHVIGEDDQFIGKKAAYAL+EGLGVIACIGE+L+EREAGKTFDVC++QLKA+ADA+PSW+N+V+AYEPVWAIGTGKVA+P+QAQEVH A R+WLK NVSAEVA+KTRIIYGGSVNG N AELAK+EDIDGFLVGGASLKGPEFATIVN+VTSKKVA Sbjct: 158 RHVIGEDDQFIGKKAAYALNEGLGVIACIGEKLEEREAGKTFDVCYEQLKAFADAVPSWENIVVAYEPVWAIGTGKVASPQQAQEVHVAVREWLKKNVSAEVASKTRIIYGGSVNGGNSAELAKEEDIDGFLVGGASLKGPEFATIVNAVTSKKVA 313
BLAST of CF834304 vs. ExPASy Swiss-Prot
Match: TPIC_SPIOL (Triosephosphate isomerase, chloroplastic OS=Spinacia oleracea GN=TPIP1 PE=1 SV=1) HSP 1 Score: 282.337 bits (721), Expect = 1.788e-75 Identity = 135/156 (86.54%), Postives = 149/156 (95.51%), Query Frame = -1 Query: 263 RHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAAFRDWLKNNVSAEVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNSVTSKKVA 730 RHVIGE ++FIGKKAAYAL++G+GVIACIGE L+EREAGKTFDVC+QQLKA+ADA+PSWDNVV+AYEPVWAIGTGKVA+P+QAQEVH A RDWLK NVS EVA+KTRIIYGGSVNG NCAELAKQEDIDGFLVGGASLKGPEFATIVNSVT+KKVA Sbjct: 166 RHVIGEQNEFIGKKAAYALNQGVGVIACIGELLEEREAGKTFDVCYQQLKAFADALPSWDNVVVAYEPVWAIGTGKVASPDQAQEVHVAVRDWLKKNVSEEVASKTRIIYGGSVNGGNCAELAKQEDIDGFLVGGASLKGPEFATIVNSVTAKKVA 321
BLAST of CF834304 vs. ExPASy Swiss-Prot
Match: TPIC_ARATH (Triosephosphate isomerase, chloroplastic OS=Arabidopsis thaliana GN=TIM PE=1 SV=1) HSP 1 Score: 280.796 bits (717), Expect = 5.203e-75 Identity = 136/156 (87.18%), Postives = 147/156 (94.23%), Query Frame = -1 Query: 263 RHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAAFRDWLKNNVSAEVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNSVTSKKVA 730 RHVIGE D+FIGKKAAYALSEGLGVIACIGE+L+EREAGKTFDVCF QLKA+ADA+PSWDN+V+AYEPVWAIGTGKVA+P+QAQEVH A R WLK NVS EVA+KTRIIYGGSVNG N AELAK+EDIDGFLVGGASLKGPEFATIVNSVTSKKVA Sbjct: 159 RHVIGEKDEFIGKKAAYALSEGLGVIACIGEKLEEREAGKTFDVCFAQLKAFADAVPSWDNIVVAYEPVWAIGTGKVASPQQAQEVHVAVRGWLKKNVSEEVASKTRIIYGGSVNGGNSAELAKEEDIDGFLVGGASLKGPEFATIVNSVTSKKVA 314
BLAST of CF834304 vs. ExPASy Swiss-Prot
Match: TPIC_SECCE (Triosephosphate isomerase, chloroplastic OS=Secale cereale PE=1 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 2.955e-70 Identity = 129/155 (83.23%), Postives = 142/155 (91.61%), Query Frame = -1 Query: 266 RHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAAFRDWLKNNVSAEVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNSVTSKKV 730 RHVIGEDD+FIGKKAAYALS+ L V+ACIGE L+EREAGKTFDVCF+Q+KA+AD I W NVVIAYEPVWAIGTGKVA+PEQAQEVHAA RDWLK NVSA+VA+ RIIYGGSVN +NCAELAK+EDIDGFLVGGASLKGP+FATI NSVTSKKV Sbjct: 142 RHVIGEDDEFIGKKAAYALSQNLKVMACIGELLEEREAGKTFDVCFKQMKAFADNITDWTNVVIAYEPVWAIGTGKVASPEQAQEVHAAVRDWLKTNVSADVASTVRIIYGGSVNAANCAELAKKEDIDGFLVGGASLKGPDFATICNSVTSKKV 296
BLAST of CF834304 vs. ExPASy Swiss-Prot
Match: TPIS_STELP (Triosephosphate isomerase, cytosolic OS=Stellaria longipes GN=TPI PE=2 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 9.836e-66 Identity = 123/157 (78.34%), Postives = 138/157 (87.90%), Query Frame = -1 Query: 263 RHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYAD-AIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAAFRDWLKNNVSAEVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNSVTSKKVA 730 R ++GE ++F+GKKAAYA SEGLGVIACIGE L+EREAGKTFDVCF+QLK++A WDNVV+AYEPVWAIGTGKVA+PEQAQEVH A RDWLK NVS EVA+KTRIIYGGSVNG N LA QED+DGFLVGGASLKGPEFATI+NSVT+KKVA Sbjct: 100 RTLLGESNEFVGKKAAYAQSEGLGVIACIGELLEEREAGKTFDVCFKQLKSFARFPAKPWDNVVVAYEPVWAIGTGKVASPEQAQEVHVAVRDWLKTNVSEEVASKTRIIYGGSVNGGNSLALAAQEDVDGFLVGGASLKGPEFATIINSVTAKKVA 256
BLAST of CF834304 vs. ExPASy Swiss-Prot
Match: TPIS_MAIZE (Triosephosphate isomerase, cytosolic OS=Zea mays PE=3 SV=3) HSP 1 Score: 210.305 bits (534), Expect = 8.637e-54 Identity = 103/153 (67.32%), Postives = 119/153 (77.78%), Query Frame = -1 Query: 272 RHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAAFRDWLKNNVSAEVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNSVTSK 730 R ++GE ++F+G K AYALS+GL VIAC+GE L++REAG T DV Q KA A+ I W NVV+AYEPVWAIGTGKVATP QAQEVHA+ RDWLK N S EVA TRIIYGGSV +NC ELA Q D+DGFLVGGASLK PEF I+N+ T K Sbjct: 100 RALLGESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIAEKIKDWSNVVVAYEPVWAIGTGKVATPAQAQEVHASLRDWLKTNASPEVAESTRIIYGGSVTAANCKELAAQPDVDGFLVGGASLK-PEFIDIINAATVK 251
BLAST of CF834304 vs. ExPASy Swiss-Prot
Match: TPIS_SECCE (Triosephosphate isomerase, cytosolic OS=Secale cereale PE=2 SV=3) HSP 1 Score: 207.608 bits (527), Expect = 5.598e-53 Identity = 101/153 (66.01%), Postives = 120/153 (78.43%), Query Frame = -1 Query: 272 RHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAAFRDWLKNNVSAEVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNSVTSK 730 R ++ E +F+G+K AYAL++GL VIAC+GE L++REAG T +V +Q KA AD I W NVV+AYEPVWAIGTGKVA+P QAQEVHA RDWLK NVS EVA TRIIYGGSV G++C ELA Q D+DGFLVGGASLK PEF I+N+ T K Sbjct: 100 RSLLAESSEFVGEKVAYALAQGLKVIACVGETLEQREAGSTMEVVAEQTKAIADKIKDWTNVVVAYEPVWAIGTGKVASPAQAQEVHANLRDWLKTNVSPEVAESTRIIYGGSVTGASCKELAAQPDVDGFLVGGASLK-PEFIDIINAATVK 251
BLAST of CF834304 vs. ExPASy Swiss-Prot
Match: TPIS_CHICK (Triosephosphate isomerase OS=Gallus gallus GN=TPI1 PE=1 SV=2) HSP 1 Score: 206.838 bits (525), Expect = 9.549e-53 Identity = 102/149 (68.46%), Postives = 116/149 (77.85%), Query Frame = -1 Query: 284 RHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAAFRDWLKNNVSAEVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNS 730 RHV GE D+ IG+K A+AL+EGLGVIACIGE+L EREAG T V F+Q KA AD + W VV+AYEPVWAIGTGK ATP+QAQEVH R WLK++VS VA TRIIYGGSV G NC ELA Q D+DGFLVGGASLK PEF I+N+ Sbjct: 99 RHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSHVSDAVAQSTRIIYGGSVTGGNCKELASQHDVDGFLVGGASLK-PEFVDIINA 246
BLAST of CF834304 vs. ExPASy Swiss-Prot
Match: TPIS_RABIT (Triosephosphate isomerase OS=Oryctolagus cuniculus GN=TPI1 PE=1 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.629e-52 Identity = 102/149 (68.46%), Postives = 115/149 (77.18%), Query Frame = -1 Query: 284 RHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAAFRDWLKNNVSAEVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNS 730 RHV GE D+ IG+K A+ALSEGLGVIACIGE+L EREAG T V F+Q K AD + W VV+AYEPVWAIGTGK ATP+QAQEVH R WLK+NVS VA TRIIYGGSV G+ C ELA Q D+DGFLVGGASLK PEF I+N+ Sbjct: 99 RHVFGESDELIGQKVAHALSEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLK-PEFVDIINA 246
BLAST of CF834304 vs. ExPASy Swiss-Prot
Match: TPIS_ORYSJ (Triosephosphate isomerase, cytosolic OS=Oryza sativa subsp. japonica GN=TPI PE=1 SV=3) HSP 1 Score: 206.068 bits (523), Expect = 1.629e-52 Identity = 101/153 (66.01%), Postives = 119/153 (77.78%), Query Frame = -1 Query: 272 RHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAAFRDWLKNNVSAEVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNSVTSK 730 R ++GE ++F+G K AYALS+GL VIAC+GE L++RE+G T DV Q KA ++ I W NVV+AYEPVWAIGTGKVATP+QAQEVH R WL NVSAEVA TRIIYGGSV G+NC ELA + D+DGFLVGGASLK PEF I+NS T K Sbjct: 100 RSLLGESNEFVGDKVAYALSQGLKVIACVGETLEQRESGSTMDVVAAQTKAISERIKDWTNVVVAYEPVWAIGTGKVATPDQAQEVHDGLRKWLAANVSAEVAESTRIIYGGSVTGANCKELAAKPDVDGFLVGGASLK-PEFIDIINSATVK 251 The following BLAST results are available for this feature:
BLAST of CF834304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834304 ID=CF834304; Name=CF834304; organism=Citrus sinensis; type=EST; length=730bpback to top |