CF834396

Overview
NameCF834396
Unique NameCF834396
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length705
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9507 contig Csv1_Contig9507:106..810. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834396 vs. ExPASy Swiss-Prot
Match: MO25N_ARATH (Putative MO25-like protein At5g47540 OS=Arabidopsis thaliana GN=At5g47540 PE=2 SV=1)

HSP 1 Score: 323.168 bits (827), Expect = 8.683e-88
Identity = 158/196 (80.61%), Postives = 184/196 (93.88%), Query Frame = 1
Query:  127 MKGLFKSKPRTPVDIVRQTRDLIIYANRSA---DVRESKREDKMAELCKNIRELKSILYGNSESEPVSEACAQLTAEFFRENTLRLLITCLPKVNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYENTDMALHYGAMLRECIRHQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFQELL 705
            MKGLFKSKPRTP D+VRQTRDL+++++RS    D+R+SKR++KMAEL +NIR++KSILYGNSE+EPV+EACAQLT EFF+E+TLRLLITCLPK+NLE RKDATQVVANLQRQQV+S+LIASDYLEANIDL+D+LI G+ENTDMALHYGAM RECIRHQ VA+YVLES H+KKFFDYIQLPNFDIAADAAATF+ELL
Sbjct:    1 MKGLFKSKPRTPADLVRQTRDLLLFSDRSTSLPDLRDSKRDEKMAELSRNIRDMKSILYGNSEAEPVAEACAQLTQEFFKEDTLRLLITCLPKLNLETRKDATQVVANLQRQQVNSRLIASDYLEANIDLMDVLIEGFENTDMALHYGAMFRECIRHQIVAKYVLESDHVKKFFDYIQLPNFDIAADAAATFKELL 196          
BLAST of CF834396 vs. ExPASy Swiss-Prot
Match: MO25M_ARATH (Putative MO25-like protein At4g17270 OS=Arabidopsis thaliana GN=At4g17270 PE=2 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 4.174e-82
Identity = 151/196 (77.04%), Postives = 177/196 (90.31%), Query Frame = 1
Query:  127 MKGLFKSKPRTPVDIVRQTRDLIIYANRS---ADVRESKREDKMAELCKNIRELKSILYGNSESEPVSEACAQLTAEFFRENTLRLLITCLPKVNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYENTDMALHYGAMLRECIRHQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFQELL 705
            M+GLFKSKPRTP DIVRQTRDL++YA+RS    D+RESKRE+KM EL K+IR+LK ILYGNSE+EPV+EACAQLT EFF+ +TLR L+T LP +NLEARKDATQVVANLQRQQV+S+LIA+DYLE+NIDL+D L+ G+ENTDMALHYG M RECIRHQ VA+YVL+S+H+KKFF YIQLPNFDIAADAAATF+ELL
Sbjct:    1 MRGLFKSKPRTPADIVRQTRDLLLYADRSNSFPDLRESKREEKMVELSKSIRDLKLILYGNSEAEPVAEACAQLTQEFFKADTLRRLLTSLPNLNLEARKDATQVVANLQRQQVNSRLIAADYLESNIDLMDFLVDGFENTDMALHYGTMFRECIRHQIVAKYVLDSEHVKKFFYYIQLPNFDIAADAAATFKELL 196          
BLAST of CF834396 vs. ExPASy Swiss-Prot
Match: MO25L_ARATH (MO25-like protein At2g03410 OS=Arabidopsis thaliana GN=At2g03410 PE=2 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 2.544e-63
Identity = 121/197 (61.42%), Postives = 156/197 (79.19%), Query Frame = 1
Query:  127 MKGLFKSKPRTPVDIVRQTRDLIIYAN---RSADVRESKREDKMAELCKNIRELKSILYGNSESEPVSEACAQLTAEFFRENTLRLLITCLPKVNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYENT-DMALHYGAMLRECIRHQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFQELL 705
            MKGLFK+K R P +IVRQTRDLI  A       D R SKR    AELC+NIR+LKSILYGN E+EPV EAC  LT EFFR +TLR LI  +PK++LEARKDATQ+VANLQ+QQV  +L+AS+YLE+N+D++D L+ G ++  ++ALHY  ML+EC+RHQ VA+Y+LES++++KFFDY+QLP FD+A DA+  F+ELL
Sbjct:    1 MKGLFKNKSRLPGEIVRQTRDLIALAESEEEETDARNSKRLGICAELCRNIRDLKSILYGNGEAEPVPEACLLLTQEFFRADTLRPLIKSIPKLDLEARKDATQIVANLQKQQVEFRLVASEYLESNLDVIDSLVEGIDHDHELALHYTGMLKECVRHQVVAKYILESKNLEKFFDYVQLPYFDVATDASKIFRELL 197          
BLAST of CF834396 vs. ExPASy Swiss-Prot
Match: CAB39_HUMAN (Calcium-binding protein 39 OS=Homo sapiens GN=CAB39 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.361e-32
Identity = 69/189 (36.51%), Postives = 115/189 (60.85%), Query Frame = 1
Query:  139 FKSKPRTPVDIVRQTRDLIIYANRSADVRESKREDKMAELCKNIRELKSILYGNSESEPVSEACAQLTAEFFRENTLRLLITCLPKVNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYENTDMALHYGAMLRECIRHQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFQELL 705
            F    ++P DIV+  ++ +    +  D+ + K E    E+ KN+  +K ILYG +E EP +EA AQL  E +    L  L+  L  ++ E +KD  Q+  N+ R+Q+ ++    +Y+    ++L +L+ GYE+ ++AL+ G MLRECIRH+ +A+ +L S+    FF Y+++  FDIA+DA ATF++LL
Sbjct:    5 FGKSHKSPADIVKNLKESMAVLEKQ-DISDKKAEKATEEVSKNLVAMKEILYGTNEKEPQTEAVAQLAQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYICTQQNILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIILWSEQFYDFFRYVEMSTFDIASDAFATFKDLL 192          
BLAST of CF834396 vs. ExPASy Swiss-Prot
Match: CAB39_BOVIN (Calcium-binding protein 39 OS=Bos taurus GN=CAB39 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.361e-32
Identity = 69/189 (36.51%), Postives = 115/189 (60.85%), Query Frame = 1
Query:  139 FKSKPRTPVDIVRQTRDLIIYANRSADVRESKREDKMAELCKNIRELKSILYGNSESEPVSEACAQLTAEFFRENTLRLLITCLPKVNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYENTDMALHYGAMLRECIRHQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFQELL 705
            F    ++P DIV+  ++ +    +  D+ + K E    E+ KN+  +K ILYG +E EP +EA AQL  E +    L  L+  L  ++ E +KD  Q+  N+ R+Q+ ++    +Y+    ++L +L+ GYE+ ++AL+ G MLRECIRH+ +A+ +L S+    FF Y+++  FDIA+DA ATF++LL
Sbjct:    5 FGKSHKSPADIVKNLKESMAVLEKQ-DISDKKAEKATEEVSKNLVAMKEILYGTNEKEPQTEAVAQLAQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYICTQQNILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIILWSEQFYDFFRYVEMSTFDIASDAFATFKDLL 192          
BLAST of CF834396 vs. ExPASy Swiss-Prot
Match: CAB39_MOUSE (Calcium-binding protein 39 OS=Mus musculus GN=Cab39 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.778e-32
Identity = 69/189 (36.51%), Postives = 115/189 (60.85%), Query Frame = 1
Query:  139 FKSKPRTPVDIVRQTRDLIIYANRSADVRESKREDKMAELCKNIRELKSILYGNSESEPVSEACAQLTAEFFRENTLRLLITCLPKVNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYENTDMALHYGAMLRECIRHQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFQELL 705
            F    ++P DIV+  ++ +    +  D+ + K E    E+ KN+  +K ILYG +E EP +EA AQL  E +    L  L+  L  ++ E +KD  Q+  N+ R+Q+ ++    +Y+    ++L +L+ GYE+ ++AL+ G MLRECIRH+ +A+ +L S+    FF Y+++  FDIA+DA ATF++LL
Sbjct:    5 FGKSHKSPADIVKNLKESMAVLEKQ-DISDKKAEKATEEVSKNLVAMKEILYGTNEKEPQTEAVAQLAQELYNSGLLGTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYICTQQNILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIILWSEQFYDFFRYVEMSTFDIASDAFATFKDLL 192          
BLAST of CF834396 vs. ExPASy Swiss-Prot
Match: MO25M_CAEEL (MO25-like protein 2 OS=Caenorhabditis elegans GN=mop-25.2 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.825e-32
Identity = 73/194 (37.63%), Postives = 114/194 (58.76%), Query Frame = 1
Query:  127 MKGLFKSKPRTPVDIVRQTRDLIIYANR-SADVRESKREDKMAELCKNIRELKSILYGNSESEPVSEACAQLTAEFFRENTLRLLITCLPKVNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYENTDMALHYGAMLRECIRHQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFQELL 705
            +K LF    +TP D+V+  RD ++  +R   +  E K E  + E  K +   K+ +YG+  +EP +E   QL  E +  N L +LI  L K   E +KD   V  NL R+Q+ ++    +YL A  ++L  L+ GYE  D+AL  G+MLRE +RH+ +AR VL S++ ++FF ++Q   FDIA DA +TF++L+
Sbjct:    2 LKPLFGKADKTPADVVKNLRDALLVIDRHGTNTSERKVEKAIEETAKMLALAKTFIYGSDANEPNNEQVTQLAQEVYNANVLPMLIKHLHKFEFECKKDVASVFNNLLRRQIGTRSPTVEYLAARPEILITLLLGYEQPDIALTCGSMLREAVRHEHLARIVLYSEYFQRFFVFVQSDVFDIATDAFSTFKDLM 195          
BLAST of CF834396 vs. ExPASy Swiss-Prot
Match: CB39L_HUMAN (Calcium-binding protein 39-like OS=Homo sapiens GN=CAB39L PE=1 SV=3)

HSP 1 Score: 136.346 bits (342), Expect = 1.505e-31
Identity = 74/195 (37.95%), Postives = 117/195 (60.00%), Query Frame = 1
Query:  124 KMKGLFKSKPRTPVDIVRQTRDLIIYANRSADVRESKREDKMAE-LCKNIRELKSILYGNSESEPVSEACAQLTAEFFRENTLRLLITCLPKVNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYENTDMALHYGAMLRECIRHQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFQELL 705
            K   LF    + P +IV+  +D     N +   ++ K+ DK +E + K+++ +K IL G +E EP +EA AQL  E +    L  LI  L  ++ E +KD TQ+  N+ R+Q+ ++    +Y+ A+  +L +L+ GYE   +AL  G MLRECIRH+ +A+ +L S   + FF Y++L  FDIA+DA ATF++LL
Sbjct:    2 KKMPLFSKSHKNPAEIVKILKD-----NLAILEKQDKKTDKASEEVSKSLQAMKEILCGTNEKEPPTEAVAQLAQELYSSGLLVTLIADLQLIDFEGKKDVTQIFNNILRRQIGTRSPTVEYISAHPHILFMLLKGYEAPQIALRCGIMLRECIRHEPLAKIILFSNQFRDFFKYVELSTFDIASDAFATFKDLL 191          
BLAST of CF834396 vs. ExPASy Swiss-Prot
Match: CB39L_MOUSE (Calcium-binding protein 39-like OS=Mus musculus GN=Cab39l PE=1 SV=3)

HSP 1 Score: 134.42 bits (337), Expect = 5.720e-31
Identity = 72/195 (36.92%), Postives = 117/195 (60.00%), Query Frame = 1
Query:  124 KMKGLFKSKPRTPVDIVRQTRDLIIYANRSADVRESKREDKMAE-LCKNIRELKSILYGNSESEPVSEACAQLTAEFFRENTLRLLITCLPKVNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYENTDMALHYGAMLRECIRHQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFQELL 705
            K   LF    + P +IV+  +D     N +   ++ K+ DK +E + K+++ +K IL G ++ EP +EA AQL  E +    L  LI  L  ++ E +KD TQ+  N+ R+Q+ ++    +Y+ ++  +L +L+ GYE   +AL  G MLRECIRH+ +A+ +L S   + FF Y++L  FDIA+DA ATF++LL
Sbjct:    2 KKMPLFSKSHKNPAEIVKILKD-----NLAILEKQDKKTDKASEEVSKSLQAMKEILCGTNDKEPPTEAVAQLAQELYSSGLLVTLIADLQLIDFEGKKDVTQIFNNILRRQIGTRCPTVEYISSHPHILFMLLKGYEAPQIALRCGIMLRECIRHEPLAKIILFSNQFRDFFKYVELSTFDIASDAFATFKDLL 191          
BLAST of CF834396 vs. ExPASy Swiss-Prot
Match: MO25_DROME (Protein Mo25 OS=Drosophila melanogaster GN=Mo25 PE=2 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.010e-27
Identity = 66/193 (34.20%), Postives = 120/193 (62.18%), Query Frame = 1
Query:  136 LFKSKPRTPVDIVRQTRDLIIYANRSADVRESKREDKMAELCKNIRELKSILYGNSESEPVSE-ACAQLTAEFFRENTLRLLITCLPKVNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYENT--DMALHYGAMLRECIRHQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFQELL 705
            LF    ++PV++V+  ++ I     + +  + K E    ++ KN+  +K++LYG+S++EP ++   AQL+ E +  N L LLI  L +++ E +K    +  N+ R+Q+ ++    +Y+    ++L  L+AGYE+   ++AL+ G MLREC R++++A+ +L S    KFF Y+++  FDIA+DA +TF+ELL
Sbjct:    3 LFGKSQKSPVELVKSLKEAI----NALEAGDRKVEKAQEDVSKNLVSIKNMLYGSSDAEPPADYVVAQLSQELYNSNLLLLLIQNLHRIDFEGKKHVALIFNNVLRRQIGTRSPTVEYICTKPEILFTLMAGYEDAHPEIALNSGTMLRECARYEALAKIMLHSDEFFKFFRYVEVSTFDIASDAFSTFKELL 191          
The following BLAST results are available for this feature:
BLAST of CF834396 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
MO25N_ARATH8.683e-8880.61Putative MO25-like protein At5g47540 OS=Arabidopsi... [more]
MO25M_ARATH4.174e-8277.04Putative MO25-like protein At4g17270 OS=Arabidopsi... [more]
MO25L_ARATH2.544e-6361.42MO25-like protein At2g03410 OS=Arabidopsis thalian... [more]
CAB39_HUMAN1.361e-3236.51Calcium-binding protein 39 OS=Homo sapiens GN=CAB3... [more]
CAB39_BOVIN1.361e-3236.51Calcium-binding protein 39 OS=Bos taurus GN=CAB39 ... [more]
CAB39_MOUSE1.778e-3236.51Calcium-binding protein 39 OS=Mus musculus GN=Cab3... [more]
MO25M_CAEEL8.825e-3237.63MO25-like protein 2 OS=Caenorhabditis elegans GN=m... [more]
CB39L_HUMAN1.505e-3137.95Calcium-binding protein 39-like OS=Homo sapiens GN... [more]
CB39L_MOUSE5.720e-3136.92Calcium-binding protein 39-like OS=Mus musculus GN... [more]
MO25_DROME1.010e-2734.20Protein Mo25 OS=Drosophila melanogaster GN=Mo25 PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05H11_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834396 ID=CF834396; Name=CF834396; organism=Citrus sinensis; type=EST; length=705bp
CACATAGGAACCTTTGCGTCAAAGCCGAAAGCTGAGGCGCTCTCTGCCTC
GGCGAGTCAATCGGTCCAGCGCCTCTCGAGCTCAGCCAGTTCAAGTTCGA
TTAACGAATTACACCCTAACACAAAAATGAAGGGACTTTTCAAATCCAAG
CCTCGTACTCCCGTCGACATCGTCCGCCAAACTCGGGATCTTATTATTTA
CGCCAATCGCAGCGCAGATGTTCGTGAATCGAAGCGCGAAGACAAGATGG
CAGAGTTATGTAAAAACATCAGGGAGTTAAAGTCAATACTTTATGGCAAT
AGTGAATCTGAGCCAGTTTCAGAGGCATGTGCACAATTGACTGCAGAGTT
CTTCAGGGAAAACACGTTACGGCTTTTGATAACTTGTCTTCCAAAGGTGA
ACTTGGAGGCAAGGAAAGATGCCACTCAGGTTGTTGCTAATTTACAGAGG
CAACAAGTTCACTCAAAGTTGATTGCCTCTGACTACTTAGAAGCAAACAT
AGATCTTTTGGATATTCTGATAGCTGGTTATGAAAACACAGACATGGCTT
TACATTATGGTGCTATGCTTAGGGAGTGTATTCGTCATCAGAGTGTTGCG
AGATATGTGTTGGAATCCCAGCACATGAAGAAGTTTTTTGACTATATACA
GCTTCCAAATTTTGACATTGCTGCAGATGCTGCTGCAACTTTTCAGGAAC
TGTTG
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