CF834402
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834402 vs. ExPASy Swiss-Prot
Match: CHLP_TOBAC (Geranylgeranyl diphosphate reductase, chloroplastic OS=Nicotiana tabacum GN=CHLP PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 1.049e-39 Identity = 74/86 (86.05%), Postives = 81/86 (94.19%), Query Frame = 2 Query: 8 KWDKTYWPTYKVLDVLHKVFYRSNPAREAFVEMCADDYVHNMTFDIYLYKRVAPGNPLEDLKVAVNTIGSLVRANALMREMDKLTI 265 KWDKTYWPTYKVLD+L KVFYRSNPAREAFVEMCAD+YV MTFD YLYK+VAPGNP+EDLK+AVNTIGSLVRANAL REMDKL++ Sbjct: 379 KWDKTYWPTYKVLDILQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKKVAPGNPIEDLKLAVNTIGSLVRANALRREMDKLSV 464
BLAST of CF834402 vs. ExPASy Swiss-Prot
Match: CHLP_ARATH (Geranylgeranyl diphosphate reductase, chloroplastic OS=Arabidopsis thaliana GN=CHLP PE=1 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 4.124e-36 Identity = 70/86 (81.40%), Postives = 79/86 (91.86%), Query Frame = 2 Query: 8 KWDKTYWPTYKVLDVLHKVFYRSNPAREAFVEMCADDYVHNMTFDIYLYKRVAPGNPLEDLKVAVNTIGSLVRANALMREMDKLTI 265 KWDKTY PTY+VLDVL KVFYRSNPAREAFVEMC D+YV MTFD YLYKRVAPG+PLED+K+AVNTIGSLVRANAL RE++KL++ Sbjct: 382 KWDKTYLPTYRVLDVLQKVFYRSNPAREAFVEMCNDEYVQKMTFDSYLYKRVAPGSPLEDIKLAVNTIGSLVRANALRREIEKLSV 467
BLAST of CF834402 vs. ExPASy Swiss-Prot
Match: CHLP_ORYSJ (Geranylgeranyl diphosphate reductase, chloroplastic OS=Oryza sativa subsp. japonica GN=CHLP PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 4.559e-35 Identity = 68/86 (79.07%), Postives = 77/86 (89.53%), Query Frame = 2 Query: 8 KWDKTYWPTYKVLDVLHKVFYRSNPAREAFVEMCADDYVHNMTFDIYLYKRVAPGNPLEDLKVAVNTIGSLVRANALMREMDKLTI 265 ++D+ YWPTYKVLDVL KVFYRSN AREAFVEMCADDYV MTFD YLYKRV PGNPL+D+K+AVNTIGSLVRA AL REM+K+T+ Sbjct: 378 EFDRLYWPTYKVLDVLQKVFYRSNAAREAFVEMCADDYVQRMTFDSYLYKRVVPGNPLDDIKLAVNTIGSLVRATALRREMEKVTL 463
BLAST of CF834402 vs. ExPASy Swiss-Prot
Match: CHLP_SYNY3 (Geranylgeranyl diphosphate reductase OS=Synechocystis sp. (strain PCC 6803) GN=chlP PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.747e-21 Identity = 46/77 (59.74%), Postives = 56/77 (72.73%), Query Frame = 2 Query: 8 KWDKTYWPTYKVLDVLHKVFYRSNPAREAFVEMCADDYVHNMTFDIYLYKRVAPGNPLEDLKVAVNTIGSLVRANAL 238 +WDK Y TY VLD+L +VFYR++ REAFVEMC+D V +TFD YLYK V P NPL +K+ TIGSL+R NAL Sbjct: 329 QWDKRYGATYLVLDILQRVFYRTDATREAFVEMCSDIDVQKLTFDSYLYKTVVPANPLVQMKITAKTIGSLLRGNAL 405 The following BLAST results are available for this feature:
BLAST of CF834402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF834402 ID=CF834402; Name=CF834402; organism=Citrus sinensis; type=EST; length=427bpback to top |