CF834511

Overview
NameCF834511
Unique NameCF834511
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length533
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME3_SOLLC (Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 PE=3 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 1.883e-63
Identity = 112/146 (76.71%), Postives = 124/146 (84.93%), Query Frame = 1
Query:    1 ARKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 438
            ARKP  +Q NMVTAQGRTDPNQ TGTSIQ C++IAS DLEPV    ++YLGRPWK++SRTVVMQS++  HIDP+GW EW GDFALKTLYYGE++N GPGAGTSKRVKWPGYHVITDP EA  FTVAELI GGSWL ST VAY EGL
Sbjct:  397 ARKPNKRQKNMVTAQGRTDPNQATGTSIQFCDIIASPDLEPVMNEYKTYLGRPWKKHSRTVVMQSYLDGHIDPSGWFEWRGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPNEAMPFTVAELIQGGSWLNSTSVAYVEGL 542          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME1_SOLLC (Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9 PE=1 SV=5)

HSP 1 Score: 238.424 bits (607), Expect = 1.594e-62
Identity = 112/146 (76.71%), Postives = 125/146 (85.62%), Query Frame = 1
Query:    1 ARKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 438
            ARKP   Q NMVTAQGRTDPNQ TGTSIQ C +IASSDLEPV     +YLGRPWKEYSRTVVM+S++G  I+PAGW+EW GDFALKTLYYGE++N GPGAGTSKRVKWPGYHVITDP +A  FTVA+LI GGSWL+STGVAY +GL
Sbjct:  399 ARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWKEYSRTVVMESYLGGLINPAGWAEWDGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPAKAMPFTVAKLIQGGSWLRSTGVAYVDGL 544          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME22_SOLLC (Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2.2 PE=3 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 6.057e-62
Identity = 111/146 (76.03%), Postives = 124/146 (84.93%), Query Frame = 1
Query:    1 ARKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 438
            ARKP   Q NMVTAQGRTDPNQ TGTSIQ C +IASSDLEPV     +YLGRPWK+YSRTVVM+S++G  I+PAGW+EW GDFALKTLYYGE++N GPGAGTSKRVKWPGYH ITDP EA  FTVA+LI GGSWL+STGVAY +GL
Sbjct:  403 ARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWKKYSRTVVMESYLGGLINPAGWAEWDGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHCITDPAEAMPFTVAKLIQGGSWLRSTGVAYVDGL 548          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME1_FICAW (Pectinesterase/pectinesterase inhibitor OS=Ficus awkeotsang PE=1 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 3.006e-61
Identity = 109/145 (75.17%), Postives = 123/145 (84.83%), Query Frame = 1
Query:    4 RKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 438
            RK +  Q N +TAQGRTDPNQNTGTSIQ CE+ AS+DLEPV+ + +SYLGRPWKEYSRTVVM+S+I D IDPAGW EW  DFALKTL+YGEY N GPG+GTS+RVKWPGYHVIT PE A++FTVAELI GGSWL STGV YT GL
Sbjct:  399 RKQMKGQENTITAQGRTDPNQNTGTSIQNCEIFASADLEPVEDTFKSYLGRPWKEYSRTVVMESYISDVIDPAGWLEWDRDFALKTLFYGEYRNGGPGSGTSERVKWPGYHVITSPEVAEQFTVAELIQGGSWLGSTGVDYTAGL 543          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME21_SOLLC (Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2.1 PE=2 SV=2)

HSP 1 Score: 233.802 bits (595), Expect = 3.926e-61
Identity = 109/146 (74.66%), Postives = 124/146 (84.93%), Query Frame = 1
Query:    1 ARKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 438
            ARKP   Q NMVTAQGRTDPNQ TGTSIQ C++IAS DL+PV     +YLGRPWK+YSRTVVM+S++G  IDP+GW+EW GDFALKTLYYGE++N GPGAGTSKRVKWPGYHVITDP EA  FTVA+LI GGSWL+ST VAY +GL
Sbjct:  403 ARKPGKYQQNMVTAQGRTDPNQATGTSIQFCDIIASPDLKPVVKEFPTYLGRPWKKYSRTVVMESYLGGLIDPSGWAEWHGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPAEAMSFTVAKLIQGGSWLRSTDVAYVDGL 548          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME18_ARATH (Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana GN=PME18 PE=1 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 1.766e-53
Identity = 98/146 (67.12%), Postives = 114/146 (78.08%), Query Frame = 1
Query:    1 ARKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 438
            AR P   Q NM+TAQGR D NQNT  SIQKC++ ASSDL PVKGS++++LGRPWK YSRTV+MQS I +HIDPAGW  W G+FAL TLYYGEY N GPGA TSKRV W G+ VI D +EA++FTVA+LI GG WLK TGV + E L
Sbjct:  412 ARNPGAGQKNMLTAQGREDQNQNTAISIQKCKITASSDLAPVKGSVKTFLGRPWKLYSRTVIMQSFIDNHIDPAGWFPWDGEFALSTLYYGEYANTGPGADTSKRVNWKGFKVIKDSKEAEQFTVAKLIQGGLWLKPTGVTFQEWL 557          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 2.820e-51
Identity = 92/146 (63.01%), Postives = 110/146 (75.34%), Query Frame = 1
Query:    1 ARKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 438
            ARKP+ +Q   +TAQ R DPNQNTG SI  C+++A+ DLE  KGS  +YLGRPWK YSR V M S +GDHIDP GW EW+G FAL +LYYGEY+N+G G+G  +RVKWPGYHVIT   EA KFTVA+ I G SWL STGV++  GL
Sbjct:  440 ARKPMAQQKITITAQNRKDPNQNTGISIHACKLLATPDLEASKGSYPTYLGRPWKLYSRVVYMMSDMGDHIDPRGWLEWNGPFALDSLYYGEYMNKGLGSGIGQRVKWPGYHVITSTVEASKFTVAQFISGSSWLPSTGVSFFSGL 585          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 9.072e-50
Identity = 94/146 (64.38%), Postives = 109/146 (74.66%), Query Frame = 1
Query:    1 ARKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 438
            AR+P   Q NMVTAQGRTDPNQNTG  IQKC + A+SDL+ VKGS  +YLGRPWKEYS+TV+MQS I D I P GWSEW+G FAL TL Y EY N G GAGT+ RVKW G+ VIT   EA+K+T  + IGGG WL STG  ++ GL
Sbjct:  447 ARRPNSGQKNMVTAQGRTDPNQNTGIVIQKCRIGATSDLQSVKGSFPTYLGRPWKEYSQTVIMQSAISDVIRPEGWSEWTGTFALNTLTYREYSNTGAGAGTANRVKWRGFKVITAAAEAQKYTAGQFIGGGGWLSSTGFPFSLGL 592          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 2.021e-49
Identity = 95/146 (65.07%), Postives = 108/146 (73.97%), Query Frame = 1
Query:    1 ARKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 438
            ARKP   Q NMVTAQGRTDPNQNTG  IQK  + A+SDL+PV+GS  +YLGRPWKEYSRTV+MQS I D I PAGW EW G+FAL TL+YGE+ N G GAGTS RVKW G+ VIT   EA+ FT    I G SWL STG  ++ GL
Sbjct:  439 ARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 584          
BLAST of CF834511 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 2.640e-49
Identity = 94/146 (64.38%), Postives = 108/146 (73.97%), Query Frame = 1
Query:    1 ARKPLLKQSNMVTAQGRTDPNQNTGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRTVVMQSHIGDHIDPAGWSEWSGDFALKTLYYGEYLNRGPGAGTSKRVKWPGYHVITDPEEAKKFTVAELIGGGSWLKSTGVAYTEGL 438
            AR+P   Q NMVTAQGRTDPNQNTG  IQKC + A+SDL PV+ S  +YLGRPWKEYSRTV+MQS I D I PAGW EW+G+FAL TL+YGEY N G GA TS RVKW G+ VIT   EA+ +T    I GGSWL STG  ++ GL
Sbjct:  438 ARRPGSGQKNMVTAQGRTDPNQNTGIVIQKCRIGATSDLRPVQKSFPTYLGRPWKEYSRTVIMQSSITDVIQPAGWHEWNGNFALDTLFYGEYANTGAGAPTSGRVKWKGHKVITSSTEAQAYTPGRFIAGGSWLSSTGFPFSLGL 583          
The following BLAST results are available for this feature:
BLAST of CF834511 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
PME3_SOLLC1.883e-6376.71Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 P... [more]
PME1_SOLLC1.594e-6276.71Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9... [more]
PME22_SOLLC6.057e-6276.03Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2... [more]
PME1_FICAW3.006e-6175.17Pectinesterase/pectinesterase inhibitor OS=Ficus a... [more]
PME21_SOLLC3.926e-6174.66Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2... [more]
PME18_ARATH1.766e-5367.12Pectinesterase/pectinesterase inhibitor 18 OS=Arab... [more]
PME61_ARATH2.820e-5163.01Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME3_ARATH9.072e-5064.38Pectinesterase/pectinesterase inhibitor 3 OS=Arabi... [more]
PME1_CITSI2.021e-4965.07Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE... [more]
PMEU1_SOLLC2.640e-4964.38Pectinesterase/pectinesterase inhibitor U1 OS=Sola... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05K11_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05K11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834511 ID=CF834511; Name=CF834511; organism=Citrus sinensis; type=EST; length=533bp
GCCAGAAAGCCCCTTTTAAAGCAATCCAACATGGTCACAGCCCAAGGACG
GACCGACCCAAATCAAAACACAGGGACTTCGATCCAAAAATGTGAAGTCA
TAGCAAGCTCAGATCTGGAGCCCGTAAAGGGCTCGATCCGTTCGTACTTG
GGCCGGCCTTGGAAAGAATACTCGAGAACAGTTGTAATGCAGTCACACAT
CGGGGATCATATCGATCCAGCTGGATGGTCAGAATGGAGTGGAGATTTTG
CACTGAAGACACTGTATTATGGGGAGTATCTGAATAGAGGGCCAGGTGCT
GGGACTAGCAAAAGAGTGAAATGGCCTGGCTATCACGTTATTACAGACCC
AGAAGAAGCAAAAAAATTTACAGTAGCTGAGCTTATCGGAGGAGGGTCGT
GGTTGAAATCAACTGGAGTTGCTTATACTGAGGGGCTGTGATGTCAGCTC
AGCATATATCTTTTAAGCTTGTATTTGCCACTGCTTTCTATCAGTTGAAT
AATGAATGAATCCGAGTAACGTGCTGTACTAGT
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