CF834948

Overview
NameCF834948
Unique NameCF834948
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7404 contig Csv1_Contig7404:713..1469. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834948 vs. ExPASy Swiss-Prot
Match: SMT1_ARATH (Cycloartenol-C-24-methyltransferase OS=Arabidopsis thaliana GN=SMT1 PE=2 SV=1)

HSP 1 Score: 295.049 bits (754), Expect = 2.852e-79
Identity = 137/163 (84.05%), Postives = 152/163 (93.25%), Query Frame = -3
Query:  268 HAPDAYGWYKEIYRVLKPGQCFAAYEWCLTDAFDPNNQEHKKIKAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLAPDSPLPWYLPLDTSHFSLSSFRLTSVGRFVTRNMVKALEFVGLAPKGSQRVQDFLEKAAEGLVAGGRKEIFTPMYFFLARKPQ 756
            HAPDAYG YKEIYRVLKPGQCFAAYEWC+TDAFDP+N EH+KIK EIEIGDGLPDIR T KCLEALKQAGFEVIWEKDLA DSP+PWYLPLD +HFSLSSFRLT+VGRF+T+NMVK LE++ LAP+GSQRV +FLE+AAEGLV GGR+EIFTPMYFFLARKP+
Sbjct:  174 HAPDAYGCYKEIYRVLKPGQCFAAYEWCMTDAFDPDNAEHQKIKGEIEIGDGLPDIRLTTKCLEALKQAGFEVIWEKDLAKDSPVPWYLPLDKNHFSLSSFRLTAVGRFITKNMVKILEYIRLAPQGSQRVSNFLEQAAEGLVDGGRREIFTPMYFFLARKPE 336          
BLAST of CF834948 vs. ExPASy Swiss-Prot
Match: SMT1_ORYSJ (Cycloartenol-C-24-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=Smt1-1 PE=2 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 1.161e-72
Identity = 126/162 (77.78%), Postives = 144/162 (88.89%), Query Frame = -3
Query:  271 HAPDAYGWYKEIYRVLKPGQCFAAYEWCLTDAFDPNNQEHKKIKAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLAPDSPLPWYLPLDTSHFSLSSFRLTSVGRFVTRNMVKALEFVGLAPKGSQRVQDFLEKAAEGLVAGGRKEIFTPMYFFLARKP 756
            HAPD  G YKEIYRVLKPGQCFA YEWC+TD ++PNN  HK+IK EIE+G+GLPDIRST++CL+A K AGFEVIW+KDLA DSP+PWYLPLD S FSLSSFRLT+VGR +TR MVKALE+VGLAP+GS+RV +FLEKAAEGLV GG+KEIFTPMYFFL RKP
Sbjct:  180 HAPDPVGCYKEIYRVLKPGQCFAVYEWCITDHYEPNNATHKRIKDEIELGNGLPDIRSTQQCLQAAKDAGFEVIWDKDLAEDSPVPWYLPLDPSRFSLSSFRLTTVGRAITRTMVKALEYVGLAPQGSERVSNFLEKAAEGLVEGGKKEIFTPMYFFLVRKP 341          
BLAST of CF834948 vs. ExPASy Swiss-Prot
Match: ERG6_KLULA (Sterol 24-C-methyltransferase OS=Kluyveromyces lactis GN=ERG6 PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.209e-39
Identity = 85/171 (49.71%), Postives = 110/171 (64.33%), Query Frame = -3
Query:  268 HAPDAYGWYKEIYRVLKPGQCFAAYEWCLTDAFDPNNQEHKKIKAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLAP-DSPLPWYLPLDTSHFSLSS-------FRLTSVGRFVTRNMVKALEFVGLAPKGSQRVQDFLEKAAEGLVAGGRKEIFTPMYFFLARKPQ 756
            HAP   G Y EIY+VLKPG  FA YEW +TD +D  N EH+KI  EIE+GDG+P + S     +AL + GFE++ E DLA  D  +PWY PL      ++S       FR + +GR  T +MV   E +GLAPKGS  V + LE+AA GLVAGG K++FTPM  F+A+KP+
Sbjct:  199 HAPTFEGVYGEIYKVLKPGGTFAVYEWVMTDKYDETNPEHRKIAYEIELGDGIPKMYSVDAARDALSKVGFEILEENDLADNDDEIPWYAPLTGEWKYVNSVADLATFFRTSRLGRAFTTSMVTVFEKLGLAPKGSVSVTNALEEAAVGLVAGGEKKLFTPMMLFVAKKPE 369          
BLAST of CF834948 vs. ExPASy Swiss-Prot
Match: ERG6_CLAL4 (Sterol 24-C-methyltransferase OS=Clavispora lusitaniae (strain ATCC 42720) GN=ERG6 PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.769e-39
Identity = 82/170 (48.24%), Postives = 109/170 (64.12%), Query Frame = -3
Query:  271 HAPDAYGWYKEIYRVLKPGQCFAAYEWCLTDAFDPNNQEHKKIKAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLAP-DSPLPWYLPL-------DTSHFSLSSFRLTSVGRFVTRNMVKALEFVGLAPKGSQRVQDFLEKAAEGLVAGGRKEIFTPMYFFLARKP 756
            HAP   G Y EIY+VLKPG  F  YEW +TD +D NN+EH+KI   IE+GDG+P +       +ALK  GF++ +EKDLA  +  +PWY PL        T     + FR + +GR VT N+V  +E +GLAPKGS++V   LE AA  LVAGG +++FTPM  ++ARKP
Sbjct:  202 HAPVLEGVYSEIYKVLKPGGVFGVYEWVMTDKYDENNEEHRKIAYGIEVGDGIPKMYKREVAEQALKNVGFDIEYEKDLADVNDEIPWYYPLAGEWKYVQTLSDCFTIFRTSKIGRTVTTNVVGLMEKIGLAPKGSKQVTGALEDAAVNLVAGGEQKLFTPMMLYIARKP 371          
BLAST of CF834948 vs. ExPASy Swiss-Prot
Match: ERG6_CANAL (Sterol 24-C-methyltransferase OS=Candida albicans GN=ERG6 PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.769e-39
Identity = 82/170 (48.24%), Postives = 109/170 (64.12%), Query Frame = -3
Query:  271 HAPDAYGWYKEIYRVLKPGQCFAAYEWCLTDAFDPNNQEHKKIKAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLAP-DSPLPWYLPL-------DTSHFSLSSFRLTSVGRFVTRNMVKALEFVGLAPKGSQRVQDFLEKAAEGLVAGGRKEIFTPMYFFLARKP 756
            HAP   G Y EIY+VLKPG  F  YEW +TD +D  N+EH+KI   IE+GDG+P + S +   +ALK  GFE+ ++KDLA  D  +PWY PL        T    L+ FR + +GRF+T   V  +E +GLAPKGS++V   LE AA  LV GGR+++FTPM  ++ RKP
Sbjct:  202 HAPVLEGVYSEIYKVLKPGGIFGVYEWVMTDKYDETNEEHRKIAYGIEVGDGIPKMYSRKVAEQALKNVGFEIEYQKDLADVDDEIPWYYPLSGDLKFCQTFGDYLTVFRTSRIGRFITTESVGLMEKIGLAPKGSKQVTHALEDAAVNLVEGGRQKLFTPMMLYVVRKP 371          
BLAST of CF834948 vs. ExPASy Swiss-Prot
Match: ERG6_YEAST (Sterol 24-C-methyltransferase OS=Saccharomyces cerevisiae GN=ERG6 PE=1 SV=4)

HSP 1 Score: 159.458 bits (402), Expect = 1.870e-38
Identity = 84/172 (48.84%), Postives = 109/172 (63.37%), Query Frame = -3
Query:  265 HAPDAYGWYKEIYRVLKPGQCFAAYEWCLTDAFDPNNQEHKKIKAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLAP-DSPLPWYLPLDTSHFSLSS-------FRLTSVGRFVTRNMVKALEFVGLAPKGSQRVQDFLEKAAEGLVAGGRKEIFTPMYFFLARKPQH 756
            HAP   G Y EIY+VLKPG  FA YEW +TD +D NN EH+KI  EIE+GDG+P +       +ALK  GFEV+  +DLA  D  +PWY PL      + +       FR + +GR  T  MV  +E +GLAP+GS+ V   LE AA GLVAGG+ ++FTPM  F+ARKP++
Sbjct:  199 HAPKLEGVYSEIYKVLKPGGTFAVYEWVMTDKYDENNPEHRKIAYEIELGDGIPKMFHVDVARKALKNCGFEVLVSEDLADNDDEIPWYYPLTGEWKYVQNLANLATFFRTSYLGRQFTTAMVTVMEKLGLAPEGSKEVTAALENAAVGLVAGGKSKLFTPMMLFVARKPEN 370          
BLAST of CF834948 vs. ExPASy Swiss-Prot
Match: SMT1_DICDI (Probable cycloartenol-C-24-methyltransferase 1 OS=Dictyostelium discoideum GN=smt1 PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.443e-38
Identity = 79/162 (48.77%), Postives = 105/162 (64.81%), Query Frame = -3
Query:  271 HAPDAYGWYKEIYRVLKPGQCFAAYEWCLTDAFDPNNQEHKKIKAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLAPDSPLPWYLPLDTSHFSLSSFRLTSVGRFVTRNMVKALEFVGLAPKGSQRVQDFLEKAAEGLVAGGRKEIFTPMYFFLARKP 756
            HAPD  G YKE++R++KPG  F  YEW +T+ F+P +     IK +IE+G+GLPD+    + + A K AGFEVI   D+A  S LPWYLPL +S  S++ F  T VGR++T    + LE V LAP GS     +L+ AA  LV GG K+IF+PM+F L RKP
Sbjct:  191 HAPDLVGLYKEVFRIVKPGGLFGGYEWIMTNKFNPEDPVEVNIKKQIELGNGLPDLVKPAEIINAAKAAGFEVITAFDVAETSELPWYLPL-SSGVSITGFLHTGVGRYLTGKFTQLLEIVKLAPAGSYNTNVWLQNAATFLVQGGEKQIFSPMFFLLCRKP 351          
BLAST of CF834948 vs. ExPASy Swiss-Prot
Match: ERG6_CANGA (Sterol 24-C-methyltransferase OS=Candida glabrata GN=ERG6 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.443e-38
Identity = 85/171 (49.71%), Postives = 108/171 (63.16%), Query Frame = -3
Query:  268 HAPDAYGWYKEIYRVLKPGQCFAAYEWCLTDAFDPNNQEHKKIKAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLA-PDSPLPWYLPLDTSHFSLSS-------FRLTSVGRFVTRNMVKALEFVGLAPKGSQRVQDFLEKAAEGLVAGGRKEIFTPMYFFLARKPQ 756
            HAP   G Y EIY+VLKPG  FA YEW +T+ +D NN+EH+KI  EIE+GDG+P + +     +ALK  GFEV   KDLA  D  +PWY PL      + S       FR +  GR  T  MV  +E VG+AP+GS  V   LE AA GLV GGRK++FTPM+ F+A+KP+
Sbjct:  199 HAPKLEGVYGEIYKVLKPGGTFAVYEWVMTENYDENNEEHRKIAYEIELGDGIPKMFTVDVAKQALKNVGFEVEVSKDLADEDDEIPWYYPLTGEWKYVQSLSDIATFFRTSYFGRKFTNCMVSIMEKVGVAPQGSVEVTAALENAAVGLVEGGRKKLFTPMFLFVAKKPE 369          
BLAST of CF834948 vs. ExPASy Swiss-Prot
Match: ERG6_ASHGO (Sterol 24-C-methyltransferase OS=Ashbya gossypii GN=ERG6 PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.858e-37
Identity = 78/171 (45.61%), Postives = 109/171 (63.74%), Query Frame = -3
Query:  268 HAPDAYGWYKEIYRVLKPGQCFAAYEWCLTDAFDPNNQEHKKIKAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLAP-DSPLPWYLPLDTSHFSLSSF-------RLTSVGRFVTRNMVKALEFVGLAPKGSQRVQDFLEKAAEGLVAGGRKEIFTPMYFFLARKPQ 756
            HAP   G Y EIYRVLKPG  FA YEW +T+ +D  N EH++I  +IE+GDG+P + S +   +AL + GFE++ ++D A  D P+PWY PL      + +        R +++GR VT   V  +E + LAP+GS  V + LE AA GLVAGG+ ++FTPM  F+ARKP+
Sbjct:  200 HAPSFEGVYGEIYRVLKPGGVFAVYEWVMTENYDETNPEHRRIAYDIELGDGIPKMYSVKVARDALAKVGFEILVDEDRADNDDPVPWYYPLTGEWAYIQTIADLGTFVRTSALGRRVTSAFVSLMETLRLAPRGSSEVVNALESAAAGLVAGGKSKLFTPMMLFVARKPE 370          
BLAST of CF834948 vs. ExPASy Swiss-Prot
Match: ERG6_DEBHA (Sterol 24-C-methyltransferase OS=Debaryomyces hansenii GN=ERG6 PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.340e-36
Identity = 79/172 (45.93%), Postives = 108/172 (62.79%), Query Frame = -3
Query:  271 HAPDAYGWYKEIYRVLKPGQCFAAYEWCLTDAFDPNNQEHKKIKAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLA-PDSPLPWYLPLD---------TSHFSLSSFRLTSVGRFVTRNMVKALEFVGLAPKGSQRVQDFLEKAAEGLVAGGRKEIFTPMYFFLARKP 756
            HAP   G Y EIY+VLKPG  F  YEW +TD +D  N+EH+KI   IE+GDG+P +       +ALK  GFE+ +E DLA  +  +PWY PL          + +F++  FR + VGR +T   V  +E +GLAPKGS++V + LE AA  LV GGR+++FTPM  ++ RKP
Sbjct:  203 HAPVLEGVYSEIYKVLKPGGVFGVYEWVMTDKYDDENEEHRKIAYGIEVGDGIPKMYKREVAEKALKSVGFEIEYEADLADKEDDIPWYYPLSGEWKYVQTLSDYFTI--FRTSKVGRTITTEAVGLMEKLGLAPKGSKQVTNALEDAAVNLVEGGRQKLFTPMMLYVCRKP 372          
The following BLAST results are available for this feature:
BLAST of CF834948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
SMT1_ARATH2.852e-7984.05Cycloartenol-C-24-methyltransferase OS=Arabidopsis... [more]
SMT1_ORYSJ1.161e-7277.78Cycloartenol-C-24-methyltransferase 1 OS=Oryza sat... [more]
ERG6_KLULA2.209e-3949.71Sterol 24-C-methyltransferase OS=Kluyveromyces lac... [more]
ERG6_CLAL43.769e-3948.24Sterol 24-C-methyltransferase OS=Clavispora lusita... [more]
ERG6_CANAL3.769e-3948.24Sterol 24-C-methyltransferase OS=Candida albicans ... [more]
ERG6_YEAST1.870e-3848.84Sterol 24-C-methyltransferase OS=Saccharomyces cer... [more]
SMT1_DICDI2.443e-3848.77Probable cycloartenol-C-24-methyltransferase 1 OS=... [more]
ERG6_CANGA2.443e-3849.71Sterol 24-C-methyltransferase OS=Candida glabrata ... [more]
ERG6_ASHGO7.858e-3745.61Sterol 24-C-methyltransferase OS=Ashbya gossypii G... [more]
ERG6_DEBHA1.340e-3645.93Sterol 24-C-methyltransferase OS=Debaryomyces hans... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06G13_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06G13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834948 ID=CF834948; Name=CF834948; organism=Citrus sinensis; type=EST; length=758bp
TTTTGCGGAGAAGTCGCACATATTTTGTTAAAGTACAAATGTCTCCACCT
TTGTAGAGGGTATAGAAGGAAAAAGACAGAACTGGTCAAGACCTAGAACT
AAACAAAGAGGAAATAACAAAAAACAAATCAAATGGCACAAAATGACTCC
AGGGGTGATAAAACATAAACATATTAAATTAAGAAAATAGATAATAGAAA
TTGCTCGAAACTAAGTCCTCCGCCCAAGATTCGCAACTGAAGCTACTCAT
TTTACAGATCAGCCATGTTGTGGCTTGCGGGCCAAAAAGAAGTACATTGG
CGTGAAAATCTCTTTCCTCCCGCCTGCAACCAATCCTTCTGCTGCCTTCT
CCAGAAAATCTTGAACCCTTTGACTTCCCTTTGGGGCTAGTCCCACAAAT
TCTAGGGCTTTCACCATATTTCTAGTCACAAAACGTCCAACTGATGTTAG
GCGGAAGCTACTCAGTGAAAAGTGAGACGTATCCAAAGGCAAGTACCATG
GGAGAGGTGAGTCTGGAGCAAGATCTTTCTCCCATATCACCTCAAAACCA
GCTTGTTTCAGAGCTTCCAAGCATTTTCTAGTCGACCTGATGTCTGGAAG
CCCATCACCAATCTCGATTTCCGCCTTAATTTTTTTATGTTCTTGATTGT
TTGGATCAAACGCATCAGTCAAGCACCATTCATATGCAGCAAAACATTGG
CCAGGCTTTAATACTCTGTAAATCTCTTTGTACCATCCATATGCATCTGG
AGCATGAC
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