CF835169
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835169 vs. ExPASy Swiss-Prot
Match: VDAC1_SOLTU (Mitochondrial outer membrane protein porin of 34 kDa OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 254.218 bits (648), Expect = 4.322e-67 Identity = 127/172 (73.84%), Postives = 148/172 (86.05%), Query Frame = -3 Query: 146 RLNSSIWHDYAGISTSVGLTANPIVNFSAVIGTKVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPL--TAVGAEVIHSFSTTDNTITVGTQHILDPLTTLKA*VINAGIASALIQHERRPNSLFTISGEVDTKAIEKSAKFGLALALKP 655 +L HDYAGI TSVGLTANPIVNFS V+GT +++LGTD+SFD+K+G+FTKCNAGLSF NADL+ASLNLNNKGD+L ASYYH V+PL TAVGAEV HSFST +N ITVGTQH LDPLT++KA + N G ASAL+QHE RP SLFT+SGEVDTK+++K AKFGLALALKP Sbjct: 105 KLEVQYLHDYAGICTSVGLTANPIVNFSGVVGTNIIALGTDVSFDTKTGDFTKCNAGLSFTNADLVASLNLNNKGDNLTASYYHTVSPLTSTAVGAEVNHSFSTNENIITVGTQHRLDPLTSVKARINNFGKASALLQHEWRPKSLFTVSGEVDTKSVDKGAKFGLALALKP 276
BLAST of CF835169 vs. ExPASy Swiss-Prot
Match: VDAC2_SOLTU (Mitochondrial outer membrane protein porin of 36 kDa OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 238.039 bits (606), Expect = 3.205e-62 Identity = 118/165 (71.52%), Postives = 145/165 (87.88%), Query Frame = -3 Query: 146 HDYAGISTSVGLTANPIVNFSAVIGTKVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPL--TAVGAEVIHSFSTTDNTITVGTQHILDPLTTLKA*VINAGIASALIQHERRPNSLFTISGEVDTKAIEKSAKFGLALALKP 634 H+YAGI+TS+GLTA+P+VNFS V G ++LGTDLSFD+ +GNFTKCNAGLSF+++DLIASL LN+KGD+++ASYYH V P+ TAVGAE+ HSFS+ +NT+T+GTQH+LDPLTT+KA V + G ASALIQHE RP SLFTISGEVDT+AIEKSAK GLA+ALKP Sbjct: 112 HEYAGINTSIGLTASPLVNFSGVAGNNTVALGTDLSFDTATGNFTKCNAGLSFSSSDLIASLALNDKGDTVSASYYHTVKPVTNTAVGAELTHSFSSNENTLTIGTQHLLDPLTTVKARVNSYGKASALIQHEWRPKSLFTISGEVDTRAIEKSAKIGLAVALKP 276
BLAST of CF835169 vs. ExPASy Swiss-Prot
Match: VDAC1_ARATH (Mitochondrial outer membrane protein porin 1 OS=Arabidopsis thaliana GN=At3g01280 PE=1 SV=3) HSP 1 Score: 236.884 bits (603), Expect = 7.140e-62 Identity = 123/165 (74.55%), Postives = 140/165 (84.85%), Query Frame = -3 Query: 146 HDYAGISTSVGLTANPIVNFSAVIGTKVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPL--TAVGAEVIHSFSTTDNTITVGTQHILDPLTTLKA*VINAGIASALIQHERRPNSLFTISGEVDTKAIEKSAKFGLALALKP 634 H+YAGISTS+GLT NP VNFS VIG+ VL++GTD+SFD+KSGNFTK NAGLSF DLIASL +N+KGD L ASYYH VNPL TAVGAEV H S+ D+TITVGTQH LDPLT++KA V +AGIASALIQHE +P S FTISGEVDTK+I+KSAK GLALALKP Sbjct: 112 HEYAGISTSMGLTQNPTVNFSGVIGSNVLAVGTDVSFDTKSGNFTKINAGLSFTKEDLIASLTVNDKGDLLNASYYHIVNPLFNTAVGAEVSHKLSSKDSTITVGTQHSLDPLTSVKARVNSAGIASALIQHEWKPKSFFTISGEVDTKSIDKSAKVGLALALKP 276
BLAST of CF835169 vs. ExPASy Swiss-Prot
Match: VDAC2_ARATH (Mitochondrial outer membrane protein porin 2 OS=Arabidopsis thaliana GN=HSR2 PE=1 SV=3) HSP 1 Score: 223.402 bits (568), Expect = 8.169e-58 Identity = 111/164 (67.68%), Postives = 134/164 (81.71%), Query Frame = -3 Query: 146 WHDYAGISTSVGLTANPIVNFSAVIGTKVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPLTAVGAEVIHSFSTTDNTITVGTQHILDPLTTLKA*VINAGIASALIQHERRPNSLFTISGEVDTKAIEKSAKFGLALALKP 637 +HDYAGISTSVG TA PIVNFS V+GT LSLGTD++++++SGNF NAG +F DL ASL LN+KG+ L ASYY V+P T VGAE+ H+F+T +N ITVGTQH LDPLTT+KA V NAG+A+ALIQHE RP S FT+SGEVD+KAI+KSAK G+ALALKP Sbjct: 111 FHDYAGISTSVGFTATPIVNFSGVVGTNGLSLGTDVAYNTESGNFKHFNAGFNFTKDDLTASLILNDKGEKLNASYYQIVSPSTVVGAEISHNFTTKENAITVGTQHALDPLTTVKARVNNAGVANALIQHEWRPKSFFTVSGEVDSKAIDKSAKVGIALALKP 274
BLAST of CF835169 vs. ExPASy Swiss-Prot
Match: VDAC1_ORYSJ (Mitochondrial outer membrane protein porin OS=Oryza sativa subsp. japonica GN=VDAC1 PE=1 SV=3) HSP 1 Score: 223.016 bits (567), Expect = 1.067e-57 Identity = 111/164 (67.68%), Postives = 136/164 (82.93%), Query Frame = -3 Query: 146 HDYAGISTSVGLTANPIVNFSAVIGTKVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVN-PLTAVGAEVIHSFSTTDNTITVGTQHILDPLTTLKA*VINAGIASALIQHERRPNSLFTISGEVDTKAIEKSAKFGLALALKP 634 HDYAG+S S+GLTA+P+VN S+V GTK L++G D+S D+ +GN TK NAGLSF+N DLIASLNLNNKGDSL ASYYH VN TAVGAE+ HSFS+ +N++T GTQH LDPLT +KA N+G ASAL+QHE RP S++TIS EVDTKAI+KS+K G+A+ALKP Sbjct: 111 HDYAGVSASIGLTASPVVNLSSVFGTKALAVGADVSLDTATGNLTKYNAGLSFSNDDLIASLNLNNKGDSLTASYYHIVNHSATAVGAELTHSFSSNENSLTFGTQHTLDPLTVVKARFNNSGKASALLQHEWRPKSVWTISAEVDTKAIDKSSKVGIAVALKP 274
BLAST of CF835169 vs. ExPASy Swiss-Prot
Match: VDAC_PEA (Outer plastidial membrane protein porin OS=Pisum sativum GN=POR1 PE=1 SV=2) HSP 1 Score: 219.55 bits (558), Expect = 1.180e-56 Identity = 113/165 (68.48%), Postives = 130/165 (78.79%), Query Frame = -3 Query: 146 HDYAGISTSVGLTANPIVNFSAVIGTKVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPL--TAVGAEVIHSFSTTDNTITVGTQHILDPLTTLKA*VINAGIASALIQHERRPNSLFTISGEVDTKAIEKSAKFGLALALKP 634 H+YAGIS+SVGL ANPIVNFS+VIGT L+ G D+SFD+K G TK NA ++F DLI SL LN KGD L+ASYYH +NPL TAVG ++ H FST +NT T+GTQH LDPLTT+K V N+G ASALIQHE RP SL TIS EVDTKAIEKSAK GL+LALKP Sbjct: 112 HEYAGISSSVGLKANPIVNFSSVIGTNALAFGADISFDTKLGELTKSNAAVNFVKDDLIGSLTLNEKGDLLSASYYHAINPLSNTAVGVDISHRFSTKENTFTLGTQHALDPLTTVKGRVTNSGKASALIQHEWRPKSLITISSEVDTKAIEKSAKIGLSLALKP 276
BLAST of CF835169 vs. ExPASy Swiss-Prot
Match: VDAC1_WHEAT (Mitochondrial outer membrane porin OS=Triticum aestivum GN=VDAC1 PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.442e-54 Identity = 108/164 (65.85%), Postives = 128/164 (78.05%), Query Frame = -3 Query: 146 HDYAGISTSVGLTANPIVNFSAVIGTKVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPL-TAVGAEVIHSFSTTDNTITVGTQHILDPLTTLKA*VINAGIASALIQHERRPNSLFTISGEVDTKAIEKSAKFGLALALKP 634 HDYAGI+ S+GLTANP+VN S GT L++G D+S D+ + NF K NA LS+ N DLIASLNLNNKGDSL ASYYH V TAVGAE+ HSFS+ +N++T GTQH LDPLT +KA + N+G ASALIQHE P SL TIS EVDTKAIEKS+K G+A+ALKP Sbjct: 112 HDYAGINASIGLTANPVVNLSGAFGTSALAVGADVSLDTATKNFAKYNAALSYTNQDLIASLNLNNKGDSLTASYYHIVEKSGTAVGAELTHSFSSNENSLTFGTQHTLDPLTLVKARINNSGKASALIQHEFMPKSLCTISAEVDTKAIEKSSKVGIAIALKP 275
BLAST of CF835169 vs. ExPASy Swiss-Prot
Match: VDAC_MAIZE (Outer plastidial membrane protein porin OS=Zea mays GN=POR1 PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.001e-47 Identity = 98/171 (57.31%), Postives = 124/171 (72.51%), Query Frame = -3 Query: 149 RLNSSIWHDYAGISTSVGLTANPIVNFSAVIGTKVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFV--NPLTAVGAEVIHSFSTTDNTITVGTQHILDPLTTLKA*VINAGIASALIQHERRPNSLFTISGEVDTKAIEKSAKFGLALALK 655 +L H+YAG++ SVGL +NP+VN S G+K LS+G D+SFD+ + +FTK NA LS + DLIASL+LNN GD+L ASYYH V + TAVGAE+ HS S ++T+ G+QH LDP TT+K N G+ASAL+QHE RP S TISG+VDTKAIEKS K GL+L LK Sbjct: 106 KLEFQYLHEYAGVNASVGLNSNPMVNLSGAFGSKALSVGVDVSFDTATSDFTKYNAALSLTSPDLIASLHLNNHGDTLVASYYHLVKNHSGTAVGAELSHSMSRNESTLIFGSQHSLDPHTTIKTRFNNYGMASALVQHEWRPKSFVTISGDVDTKAIEKSTKVGLSLVLK 276 The following BLAST results are available for this feature:
BLAST of CF835169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835169 ID=CF835169; Name=CF835169; organism=Citrus sinensis; type=EST; length=657bpback to top |