CF835481

Overview
NameCF835481
Unique NameCF835481
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length799
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835481 vs. ExPASy Swiss-Prot
Match: FABG_THEMA (3-oxoacyl-[acyl-carrier-protein] reductase OS=Thermotoga maritima GN=fabG PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.219e-18
Identity = 63/188 (33.51%), Postives = 94/188 (50.00%), Query Frame = -1
Query:  245 IESSVQKAWEAFWRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVC---IRMRDXXXXXXXXXXXXXXXXNRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL 799
            I+  V+K  + + RIDVL+NNAG+       +   EE+WD  I  NL G + V++ V    I+ R+                     PG   YA+SKAG+  MTK  A EL   NIRVN+++PG   + +TE L +K      AL  +PL  FG  +  +  ++ +L  D S YV+G +  +D G  +
Sbjct:   69 IKEVVEKVVQKYGRIDVLVNNAGITRDALL-VRMKEEDWDAVINVNLKGVFNVTQMVVPYMIKQRNGSIVNVSSVVGIYGN------PGQTNYAASKAGVIGMTKTWAKELAGRNIRVNAVAPGFIETPMTEKLPEK--ARETALSRIPLGRFGKPE-EVAQVILFLASDESSYVTGQVIGIDGGLVI 246          
BLAST of CF835481 vs. ExPASy Swiss-Prot
Match: UCPA_SALTY (Oxidoreductase ucpA OS=Salmonella typhimurium GN=ucpA PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.285e-16
Identity = 65/197 (32.99%), Postives = 101/197 (51.27%), Query Frame = -1
Query:  242 IESSVQKAWEAFWRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVC---IRMRDXXXXXXXXXXXXXXXXNRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ-------KKWLNNVALKTVPLREFGTSDP-ALTSLVRYLIHDSSKYVSGNMFIVDAGATLP 799
            ++++V +A E   RID+L+NNAGV   + + LD +EE+ D +I  N+ G W V+K V    I+ +D                     PG  AYA SKA +  +TK +A+E     IRVN+I PG   + + E + +       +  L  +A K +PLR    +DP  +  L  +L  D S Y++G   ++D G+TLP
Sbjct:   69 VQAAVARAKETEGRIDILVNNAGVC-RLGNFLDMSEEDRDFHIDINIKGVWNVTKAVLPEMIKRKDGRIVMMSSVTGDMVAD-----PGETAYALSKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPDDPESVLTEMA-KAIPLRRL--ADPLEVGELAAFLASDESSYLTGTQNVIDGGSTLP 256          
BLAST of CF835481 vs. ExPASy Swiss-Prot
Match: UCPA_SALTI (Oxidoreductase ucpA OS=Salmonella typhi GN=ucpA PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.285e-16
Identity = 65/197 (32.99%), Postives = 101/197 (51.27%), Query Frame = -1
Query:  242 IESSVQKAWEAFWRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVC---IRMRDXXXXXXXXXXXXXXXXNRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ-------KKWLNNVALKTVPLREFGTSDP-ALTSLVRYLIHDSSKYVSGNMFIVDAGATLP 799
            ++++V +A E   RID+L+NNAGV   + + LD +EE+ D +I  N+ G W V+K V    I+ +D                     PG  AYA SKA +  +TK +A+E     IRVN+I PG   + + E + +       +  L  +A K +PLR    +DP  +  L  +L  D S Y++G   ++D G+TLP
Sbjct:   69 VQAAVARAKETEGRIDILVNNAGVC-RLGNFLDMSEEDRDFHIDINIKGVWNVTKAVLPEMIKRKDGRIVMMSSVTGDMVAD-----PGETAYALSKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPDDPESVLTEMA-KAIPLRRL--ADPLEVGELAAFLASDESSYLTGTQNVIDGGSTLP 256          
BLAST of CF835481 vs. ExPASy Swiss-Prot
Match: FABG_CHLMU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia muridarum GN=fabG PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.421e-15
Identity = 62/183 (33.88%), Postives = 91/183 (49.73%), Query Frame = -1
Query:  254 IESSVQKAWEAFWRIDVLINNAGV-RGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXNRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAG 799
            + + VQK    +  IDV++NNAG+ R S+   +  +EEEW   I TNL   + V   V   M                   RG  PG   YA++KAG+   +K ++ E+G  NIRVN I+PG   +++T+GL     L N  LK VPL   GT +  +     +L  + S Y++G +  VD G
Sbjct:   72 VSAQVQKFLAEYGTIDVVVNNAGITRDSLLMRM--SEEEWSSVIDTNLGSIYNVCSAVIRPM--IKARSGAIVNISSIVGLRGS-PGQTNYAAAKAGIIGFSKALSKEVGSKNIRVNCIAPGFIDTDMTKGLSDN--LKNEWLKGVPLGRVGTPE-EIAMAALFLASNQSSYITGQVLSVDGG 246          
BLAST of CF835481 vs. ExPASy Swiss-Prot
Match: UCPA_ECO57 (Oxidoreductase ucpA OS=Escherichia coli O157:H7 GN=ucpA PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.424e-15
Identity = 61/194 (31.44%), Postives = 98/194 (50.52%), Query Frame = -1
Query:  242 IESSVQKAWEAFWRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXNRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ-------KKWLNNVALKTVPLREFGTSDP-ALTSLVRYLIHDSSKYVSGNMFIVDAGATLP 799
            + +++++A E   RID+L+NNAGV   + S LD ++++ D +I  N+ G W V+K V   M                       PG  AYA +KA +  +TK +A+E     IRVN+I PG   + + E + +       +  L  +A K +PLR    +DP  +  L  +L  D S Y++G   ++D G+TLP
Sbjct:   69 VAAAIKRAKEKEGRIDILVNNAGVC-RLGSFLDMSDDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVAD--PGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMA-KAIPLRRL--ADPLEVGELAAFLASDESSYLTGTQNVIDGGSTLP 256          
BLAST of CF835481 vs. ExPASy Swiss-Prot
Match: UCPA_ECOLI (Oxidoreductase ucpA OS=Escherichia coli (strain K12) GN=ucpA PE=1 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 4.135e-15
Identity = 60/194 (30.93%), Postives = 98/194 (50.52%), Query Frame = -1
Query:  242 IESSVQKAWEAFWRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXNRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQ-------KKWLNNVALKTVPLREFGTSDP-ALTSLVRYLIHDSSKYVSGNMFIVDAGATLP 799
            + +++++A E   RID+L+NNAGV   + S LD ++++ D +I  N+ G W V+K V   M                       PG  AYA +KA +  +TK +A+E     IRVN+I PG   + + E + +       +  L  +A K +P+R    +DP  +  L  +L  D S Y++G   ++D G+TLP
Sbjct:   69 VAAAIKRAKEKEGRIDILVNNAGVC-RLGSFLDMSDDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVAD--PGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMA-KAIPMRRL--ADPLEVGELAAFLASDESSYLTGTQNVIDGGSTLP 256          
BLAST of CF835481 vs. ExPASy Swiss-Prot
Match: DHG2_BACSU (Glucose 1-dehydrogenase 2 OS=Bacillus subtilis GN=ycdF PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 4.135e-15
Identity = 53/185 (28.65%), Postives = 88/185 (47.57%), Query Frame = -1
Query:  245 IESSVQKAWEAFWRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXNRGQLPGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAGATL 799
            I++ +  A E F  +DV++NN+G  G    P + + E+W   I  N+TG++L +K     M                       P  V Y++SK G+  MT+ +AL      IRVN+I+PG   +E      +K+      LK +P++ FG  +  + +   +L+ + + YV+G    VD G TL
Sbjct:   72 IQALLDTALEHFGTLDVMVNNSGFNGVEAMPHEMSLEDWQRVIDVNVTGTFLGAKAALNHMMKNNIKGNVLNISSVHQQI--PRPVNVQYSTSKGGIKMMTETLALNYADKGIRVNAIAPGTIATESNVD-TKKEESRQKQLKKIPMKAFGKPE-EVAAAAAWLVSEEASYVTGATLFVDGGMTL 252          
BLAST of CF835481 vs. ExPASy Swiss-Prot
Match: FABG_STAES (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=fabG PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.400e-15
Identity = 54/184 (29.35%), Postives = 88/184 (47.83%), Query Frame = -1
Query:  254 IESSVQKAWEAFWRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXNRGQL--PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAG 799
            ++  +++    F  +DVL+NNAG+       +   E+EWD  I TNL G      + CI+                     G +  PG   Y ++KAG+  +TK  A EL    I VN+++PG  +S++T  L     L +  L+ +PL+ FG  D  + + V +L  D +KY++G    V+ G
Sbjct:   67 VKEMIKEVVSQFGSVDVLVNNAGITKD-NLLMRMKEQEWDDVIDTNLKGV-----FNCIQKVTPQMLRQRSGAIINLTSIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGITVNAVAPGFIVSDMTNALSDD--LKDQMLEQIPLKRFG-EDTDIANTVAFLASDKAKYITGQTIHVNGG 241          
BLAST of CF835481 vs. ExPASy Swiss-Prot
Match: FABG_STAEQ (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=fabG PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.400e-15
Identity = 54/184 (29.35%), Postives = 88/184 (47.83%), Query Frame = -1
Query:  254 IESSVQKAWEAFWRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXNRGQL--PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAG 799
            ++  +++    F  +DVL+NNAG+       +   E+EWD  I TNL G      + CI+                     G +  PG   Y ++KAG+  +TK  A EL    I VN+++PG  +S++T  L     L +  L+ +PL+ FG  D  + + V +L  D +KY++G    V+ G
Sbjct:   67 VKEMIKEVVSQFGSVDVLVNNAGITKD-NLLMRMKEQEWDDVIDTNLKGV-----FNCIQKVTPQMLRQRSGAIINLTSIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGITVNAVAPGFIVSDMTNALSDD--LKDQMLEQIPLKRFG-EDTDIANTVAFLASDKAKYITGQTIHVNGG 241          
BLAST of CF835481 vs. ExPASy Swiss-Prot
Match: FABG_STAAW (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MW2) GN=fabG PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.203e-14
Identity = 54/184 (29.35%), Postives = 88/184 (47.83%), Query Frame = -1
Query:  254 IESSVQKAWEAFWRIDVLINNAGVRGSVKSPLDWTEEEWDHNIKTNLTGSWLVSKYVCIRMRDXXXXXXXXXXXXXXXXNRGQL--PGGVAYASSKAGLNSMTKVMALELGVHNIRVNSISPGLFISEITEGLMQKKWLNNVALKTVPLREFGTSDPALTSLVRYLIHDSSKYVSGNMFIVDAG 799
            +++ +++    F  +DVL+NNAG+       +   E+EWD  I TNL G      + CI+                     G +  PG   Y ++KAG+  +TK  A EL    I VN+++PG  +S++T+ L  +  L    L  +PL  FG  D  + + V +L  D +KY++G    V+ G
Sbjct:   69 VKAMIKEVVSQFGSLDVLVNNAGITRD-NLLMRMKEQEWDDVIDTNLKGV-----FNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDE--LKEQMLTQIPLARFG-QDTDIANTVAFLASDKAKYITGQTIHVNGG 243          
The following BLAST results are available for this feature:
BLAST of CF835481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
FABG_THEMA5.219e-1833.513-oxoacyl-[acyl-carrier-protein] reductase OS=Ther... [more]
UCPA_SALTY1.285e-1632.99Oxidoreductase ucpA OS=Salmonella typhimurium GN=u... [more]
UCPA_SALTI1.285e-1632.99Oxidoreductase ucpA OS=Salmonella typhi GN=ucpA PE... [more]
FABG_CHLMU1.421e-1533.883-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]
UCPA_ECO572.424e-1531.44Oxidoreductase ucpA OS=Escherichia coli O157:H7 GN... [more]
UCPA_ECOLI4.135e-1530.93Oxidoreductase ucpA OS=Escherichia coli (strain K1... [more]
DHG2_BACSU4.135e-1528.65Glucose 1-dehydrogenase 2 OS=Bacillus subtilis GN=... [more]
FABG_STAES5.400e-1529.353-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAEQ5.400e-1529.353-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAW1.203e-1429.353-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01E22_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01E22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835481 ID=CF835481; Name=CF835481; organism=Citrus sinensis; type=EST; length=799bp
TTTTTTTTTTTTTTTTTATAAAATCGACAATAGTCGTAAGTTTTTTCAAT
ACAACATTTTAAACAAACTACAATGGTCATAAGTTTTTCCAATACTGCAG
TTTATCAAAATTCGATTGTCATAAGTTTTTCCAATACAATGTTTAAACAA
ACTTCAGCCAGAACCCTAGCAACAGAATGAGGAATACTACACTAACTCAC
ATTTTTCTAGGAACTCAAAGGGAAGAGAAAATAGGGACACCAGGAAGTGT
AGCCCCTGCATCCACAATGAACATGTTTCCTGAAACATATTTGGAAGAGT
CATGAATTAAATACCTAACAAGTGATGTCAATGCTGGATCTGAGGTGCCA
AATTCTCTTAAAGGGACGGTTTTCAAGGCAACATTATTTAGCCATTTTTT
TTGCATAAGACCTTCAGTAATCTCAGATATGAAAAGTCCAGGTGATATTG
AGTTAACTCTGATGTTGTGCACCCCCAGTTCCAATGCCATGACCTTAGTC
ATGGAATTAAGGCCTGCCTTGGAAGAAGCATAGGCAACACCTCCAGGTAA
CTGTCCACGATTAATACCAGCAATAGAAGATATGTTAATTATTGATCCTC
CCAGATTTGCATCACGCATTCGAATGCATACATACTTGGAAACCAACCAA
GATCCTGTTAAATTCGTTTTGATATTGTGATCCCACTCCTCCTCGGTCCA
ATCCAACGGACTCTTCACACTGCCTCTAACACCGGCATTATTAATCAAAA
CATCGATTCGCCAGAAGGCTTCCCAAGCCTTCTGTACGGAACTCTCAAT
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