CF835560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835560 vs. ExPASy Swiss-Prot
Match: WRK31_ARATH (Probable WRKY transcription factor 31 OS=Arabidopsis thaliana GN=WRKY31 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.917e-30 Identity = 78/132 (59.09%), Postives = 95/132 (71.97%), Query Frame = 1 Query: 349 RVAVDEVDFFSDDKNRVSISDHREDDRNKTTNSVHIKKENSHDQLRHRTGLDVNTGLHLLTAANTGSDQSTVDDGVSSDHADEKRTKIELTQLQVELQQMNTENQRLRDMLSQVTNNYNALQMHIIALMQQQ 744 RV VDEVDFFS+ ++RVS + +DD N V IK E S + R+ DVN GL+LLTA NTGSD+STVDDG+S D D KR KIE QLQ EL++M ENQRLRDMLSQ T N+NALQM ++A+M+QQ Sbjct: 27 RVVVDEVDFFSEKRDRVSRENINDDDDEG--NKVLIKMEGSRVEENDRSR-DVNIGLNLLTA-NTGSDESTVDDGLSMDMED-KRAKIENAQLQEELKKMKIENQRLRDMLSQATTNFNALQMQLVAVMRQQ 153
BLAST of CF835560 vs. ExPASy Swiss-Prot
Match: WRK42_ARATH (Probable WRKY transcription factor 42 OS=Arabidopsis thaliana GN=WRKY42 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.034e-25 Identity = 66/133 (49.62%), Postives = 92/133 (69.17%), Query Frame = 1 Query: 349 RVAVDEVDFFSDDKNRVSISDHREDDRNKTTNSVHIKKENSH-DQLRHRTGLDVNTGLHLLTAANTGSDQSTVDDGVSSDHADEKRTKIELTQLQVELQQMNTENQRLRDMLSQVTNNYNALQMHIIALMQQQ 744 R V+EVDFF + R +S ++ T+ VH+K+ENS D R+ +N GL+LLTA NTGSD+S VDDG+S D +EKRTK E QL+ EL++ + +NQRL+ MLSQ TNN+N+LQM ++A+M+QQ Sbjct: 25 RAVVNEVDFFRSAEKRDRVSREEQNIIADETHRVHVKRENSRVDDHDDRSTDHINIGLNLLTA-NTGSDESMVDDGLSVD-MEEKRTKCENAQLREELKKASEDNQRLKQMLSQTTNNFNSLQMQLVAVMRQQ 155
BLAST of CF835560 vs. ExPASy Swiss-Prot
Match: WRKY6_ARATH (WRKY transcription factor 6 OS=Arabidopsis thaliana GN=WRKY6 PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.143e-24 Identity = 84/216 (38.89%), Postives = 113/216 (52.31%), Query Frame = 1 Query: 136 MDKGW-GLTLDSDHPIVSNLNFFTSNKPKP-----SLARFRTNRDMXXXXXXXXXXVRMFQLXXXXXXXXXXXXXXXRVAVD-------EVDFFSDDKNRVSISDHREDDRNKTTNSVHIKKENSHDQLRHRTGLDVNTGLHLLTAANTGSDQSTVDDGVSSDHADEKRTKIELTQLQVELQQMNTENQRLRDMLSQVTNNYNALQMHIIALMQQQ 744 MD+GW GLTLDS + N N + + +++R D R F + VA D EVDFFSD K+RV REDD +KKE D+ DVNTGL+L T NT SD+S +DDG SS+ D KR K EL +LQ EL++M +NQ+LR++L+QV+N+Y +LQMH+++LMQQQ Sbjct: 1 MDRGWSGLTLDSSSLDLLNPNRISHKNHRRFSNPLAMSRIDEEDDQKTRISTNGSEFR-FPVSLSGIRDREDEDFSSGVAGDNDREVPGEVDFFSDKKSRVC----REDDEG-----FRVKKEEQDDRT------DVNTGLNLRTTGNTKSDESMIDDGESSEMED-KRAKNELVKLQDELKKMTMDNQKLRELLTQVSNSYTSLQMHLVSLMQQQ 199 The following BLAST results are available for this feature:
BLAST of CF835560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835560 ID=CF835560; Name=CF835560; organism=Citrus sinensis; type=EST; length=745bpback to top |