CF835567

Overview
NameCF835567
Unique NameCF835567
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1112 contig Csv1_Contig1112:898..1732. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CF835567 vs. ExPASy Swiss-Prot
Match: LPE10_CANAL (Mitochondrial inner membrane magnesium transporter LPE10 OS=Candida albicans GN=LPE10 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.292e-11
Identity = 43/144 (29.86%), Postives = 72/144 (50.00%), Query Frame = -1 
Query:  290 QNTENIHDNLFTQNIHSRASHGTRTSTTHSAISKHLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGIFGMNINIELFDEHKSGMQEFLWTVGGGATGSIFLYVV 721
            +N + ++D   T+  +S      R  T H         EE+EMLLE Y+  ID  +  +  L+  +  TED IN++LD  +N L+ +G+  +T  L +   + V+ ++GM  N+E F E   G  E +  V   A  ++ L+ V
Sbjct:  302 ENDDELNDLYITEKFNSEGDGQPRQGTNH---------EEIEMLLENYYQTIDEIVQIVENLKNQIKTTEDLINVVLDSNRNQLMLLGLKFSTGLLSMGVALYVSALYGM--NLENFIEEIDGGFEVVTVVSTIALIALLLFSV 434
The following BLAST results are available for this feature:
BLAST of CF835567 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
LPE10_CANAL2.292e-1129.86Mitochondrial inner membrane magnesium transporter... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS03_01H23_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01H23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835567 ID=CF835567; Name=CF835567; organism=Citrus sinensis; type=EST; length=835bp
TTTTTTTTTTTTTTTAGTTGATAGTGATCACATTACATTATCAATTACGA
ATCTTCAGGCACGTAGAAAGTGTATTAAATATTAAATATTAATGTTCCGT
GCACTCGAAGCATATCTCATAGTATTCACAAAAAACAGGATGCATGCTCC
AGCTTATCAAAGGGTGCGTTTATGTTTGTACATAGCAAATCCATCGACAC
AACAGCTCCTGAAATCAATTGCTTCTTTACTGATACACAGCAGGATTATA
TTACTCCAGCAAACGTTTGTGCTTGCACCAGGCAATGGCAACAACATATA
GGAATATGCTGCCAGTGGCGCCGCCACCAACAGTCCAGAGAAACTCTTGC
ATCCCTGATTTATGCTCATCGAACAGCTCGATGTTGATATTCATCCCGAA
AATACCAGCCACAACAACAAATGCACTCACCACAAGGGTTGCTGTCGTTA
GCATGACCCCCATTTGCAGAAGATGATTCTGTTTGTCATCCAGCATTATG
TTAATGTAGTCCTCTGTATCATCAACGTACTCCCTCAGCGTAGATAGCTT
GTTCAGTGTACCATCAATTTGCACAAAGTATGCCTCCAGGAGCATTTCTA
GCTCTTCAACATCGAGGTGCTTGCTAATAGCACTGTGAGTGGTACTAGTG
CGTGTCCCATGGCTGGCCCGGCTATGTATATTTTGAGTAAACAGATTGTC
GTGAATGTTCTCTGTGTTCTGAAAATCTGCTTCATAGCTAGTTGATCCCC
CAGTTGCTTCTAATGAGATTTCAGCAGTAGTCCTGTTATTCATATTTGAT
TGAAGAACTTCATCATCCATATCATCTCTCTCATT
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