CF835590

BLAST of CF835590 vs. ExPASy Swiss-Prot
Match: RPB4_MOUSE (DNA-directed RNA polymerase II subunit RPB4 OS=Mus musculus GN=Polr2d PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.252e-18
Identity = 53/168 (31.55%), Postives = 92/168 (54.76%), Query Frame = 3

Query:   39 SGEEEENAAELKIGDEFLKAKCLMNCEVAIILHHKYEQLQQTSDDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFEVNCPGLAKLGFLYLLSPLRKIKLESHSPLLQLCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDLSLIKKFE 542
            +G+ EE+A++L    EF  A+ L+N EV ++L H+ +Q +   D+   ++S+VF K+L Y  RFSR+KN + +  VR +L + +L +FE+ C                               L NLCPET EE+ A++PS++ R    +DE ++++L+D+   + F+
Sbjct:   10 AGDVEEDASQLIFPKEFETAETLLNSEVHMLLEHRKQQNESAEDE--QELSEVFMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELAC-------------------------------LANLCPETAEESKALIPSLEGR---FEDEELQQILDDIQTKRSFQ 141          

BLAST of CF835590 vs. ExPASy Swiss-Prot
Match: RPB4_HUMAN (DNA-directed RNA polymerase II subunit RPB4 OS=Homo sapiens GN=POLR2D PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.252e-18
Identity = 53/168 (31.55%), Postives = 92/168 (54.76%), Query Frame = 3

Query:   39 SGEEEENAAELKIGDEFLKAKCLMNCEVAIILHHKYEQLQQTSDDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFEVNCPGLAKLGFLYLLSPLRKIKLESHSPLLQLCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDLSLIKKFE 542
            +G+ EE+A++L    EF  A+ L+N EV ++L H+ +Q +   D+   ++S+VF K+L Y  RFSR+KN + +  VR +L + +L +FE+ C                               L NLCPET EE+ A++PS++ R    +DE ++++L+D+   + F+
Sbjct:   10 AGDVEEDASQLIFPKEFETAETLLNSEVHMLLEHRKQQNESAEDE--QELSEVFMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELAC-------------------------------LANLCPETAEESKALIPSLEGR---FEDEELQQILDDIQTKRSFQ 141          

BLAST of CF835590 vs. ExPASy Swiss-Prot
Match: RPB4_DICDI (DNA-directed RNA polymerase II subunit rpb4 OS=Dictyostelium discoideum GN=polr2d PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15
Identity = 54/186 (29.03%), Postives = 87/186 (46.77%), Query Frame = 3

Query:   21 PRALRMSGEEEENAAELKIGDEFLKAKCLMNCEVAIILHHKYEQLQQTSDD-------------PMNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFEVNCPGLAKLGFLYLLSPLRKIKLESHSPLLQLCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDLSLIKKF 539
            P   R   +EEE+   LK   +   AK L+N EVAI+L H+    +    +              +N + + F K+L Y ++FSRYKN  +++QVR  LS+  L EFE+                                 L NLCPE  +EA +++PS+K      +D+ ++ +L++LS ++KF
Sbjct:    4 PLIKRSGIQEEEDLTTLKFPRDLKDAKFLLNSEVAILLEHRKGISESEGTEFPQNTLLIHLYYNSINDIIRTFHKTLAYAEKFSRYKNKTSIKQVRTALSKQNLEEFEI-------------------------------ASLANLCPEISDEAKSLIPSLKKM----EDDELQAILDELSNLRKF 154          

BLAST of CF835590 vs. ExPASy Swiss-Prot
Match: RPB4_DROME (DNA-directed RNA polymerase II 16 kDa polypeptide OS=Drosophila melanogaster GN=Rpb4 PE=1 SV=5)

HSP 1 Score: 72.4034 bits (176), Expect = 2.669e-12
Identity = 47/157 (29.94%), Postives = 78/157 (49.68%), Query Frame = 3

Query:   51 EENAAELKIGDEFLKAKCLMNCEVAIILHHKYEQLQQTSDDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFEVNCPGLAKLGFLYLLSPLRKIKLESHSPLLQLCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDL 521
            +E+AA+L+   EF  A+ L+  EV ++L H+  + Q  S D   + S+VF K+  Y   F ++KN + +   R +L + +L +FE                               L  LGNLCPE  EEA A++PS++ R    +DE + ++L+D+
Sbjct:   11 DEDAADLQFPKEFENAETLLISEVHMLLDHR--KRQNESADEEQEFSEVFMKTYAYTDSFRKFKNKETIMSARSLLMQKKLHKFE-------------------------------LAALGNLCPEAPEEAKALIPSLEGR---FEDEELRQILDDI 131