CF835635
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835635 vs. ExPASy Swiss-Prot
Match: RECAC_ARATH (DNA repair protein recA homolog 1, chloroplastic OS=Arabidopsis thaliana GN=RECA PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.610e-33 Identity = 68/107 (63.55%), Postives = 88/107 (82.24%), Query Frame = 2 Query: 59 PYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPN------QEENILEEF 361 PYKQAEFEI+FGEGVSKLGC+LDCAE+M++VV+KG+WYSY DQRLGQGR+KALQ+LR+NP LQ+EIEK VR +M DG VH+ + L + S + +EE+ L++F Sbjct: 332 PYKQAEFEIMFGEGVSKLGCVLDCAEIMEVVVKKGSWYSYEDQRLGQGREKALQHLRENPALQDEIEKKVRLLMLDGEVHRSTPLMSSSSSSASHREEEEEDSLDDF 438
BLAST of CF835635 vs. ExPASy Swiss-Prot
Match: RECA_NOSP7 (Protein recA OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=recA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.097e-20 Identity = 44/97 (45.36%), Postives = 66/97 (68.04%), Query Frame = 2 Query: 59 PYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEENI 349 P++ AEF+IIFG+G+S LGC++D AE I++RKGAWYSY + QGRD A++YL + P EEI+K+VR + G+V + + S ++EE + Sbjct: 257 PFRIAEFDIIFGKGISTLGCVVDLAEETGIIIRKGAWYSYNGDNISQGRDNAIKYLEEKPEFAEEIKKLVREKLDKGAVVSANSVAKASEEDEEEEV 353
BLAST of CF835635 vs. ExPASy Swiss-Prot
Match: RECA_CYAA5 (Protein recA OS=Cyanothece sp. (strain ATCC 51142) GN=recA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.097e-20 Identity = 43/79 (54.43%), Postives = 60/79 (75.95%), Query Frame = 2 Query: 59 PYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSV 295 P++ AEF+IIFG+G+S++GCMLD AE D+V+RKGAWYSY + QGRD A++YL +NP + E IE+ VR + GS+ Sbjct: 258 PFRIAEFDIIFGQGISRMGCMLDLAEQSDVVLRKGAWYSYNGDNISQGRDNAVKYLEENPKIAETIEQQVREKLELGSL 336
BLAST of CF835635 vs. ExPASy Swiss-Prot
Match: RECA_CYAP8 (Protein recA OS=Cyanothece sp. (strain PCC 8801) GN=recA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.433e-20 Identity = 47/95 (49.47%), Postives = 68/95 (71.58%), Query Frame = 2 Query: 59 PYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEE 343 P++ AEF+IIFG+G+S++GCMLD AE D+V RKGAWYSY + + QGRD A++YL DNP + + IE+ VR + GS+ +F + + N+EE Sbjct: 258 PFRIAEFDIIFGKGISRMGCMLDLAEQTDVVNRKGAWYSYNGENISQGRDNAVKYLEDNPEVADTIERQVREKLELGSL---NFAISQTDDNEEE 349
BLAST of CF835635 vs. ExPASy Swiss-Prot
Match: RECA_SPIPL (Protein recA OS=Spirulina platensis GN=recA PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.170e-20 Identity = 39/79 (49.37%), Postives = 62/79 (78.48%), Query Frame = 2 Query: 59 PYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSV 295 P++ AEF+IIFG+G+S +GC++D AE ++ RKGAWYSY ++ +GQGRD+ + Y+++NP EEI+K VR+ ++ G+V Sbjct: 257 PFRIAEFDIIFGQGISTIGCLIDLAEETGVIKRKGAWYSYNNENIGQGRDRTITYMQENPAFTEEIDKRVRAALAGGAV 335
BLAST of CF835635 vs. ExPASy Swiss-Prot
Match: RECA_ANASP (Protein recA OS=Anabaena sp. (strain PCC 7120) GN=recA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.585e-19 Identity = 43/100 (43.00%), Postives = 68/100 (68.00%), Query Frame = 2 Query: 59 PYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEENILEE 358 P++ AEF+IIFG+GVS LGC++D AE I++RKGAWYSY + QGRD A++YL + P E+I++ VR + G+V + + + +++E++ EE Sbjct: 257 PFRIAEFDIIFGKGVSTLGCLVDLAEETGILIRKGAWYSYNGDNISQGRDNAIKYLEEKPEFSEQIKQQVREKLDKGAVVSANSVAKNNEDDEDEDVEEE 356
BLAST of CF835635 vs. ExPASy Swiss-Prot
Match: RECA_PROM4 (Protein recA OS=Prochlorococcus marinus (strain MIT 9211) GN=recA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.703e-19 Identity = 42/94 (44.68%), Postives = 66/94 (70.21%), Query Frame = 2 Query: 59 PYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQE 340 P++ AEF+I+FG+G+S +GC+LD AE +IV RKGAWYSY +GQGRD + +L N +E+IEK+VR +++GS + +R ++ N++ Sbjct: 272 PFRIAEFDILFGKGISTIGCLLDLAEETNIVARKGAWYSYEGDNIGQGRDNTITWLEQNTEAKEKIEKLVRQKLTEGSEVSSNSMRPLTTANRK 365
BLAST of CF835635 vs. ExPASy Swiss-Prot
Match: RECA_CYAP4 (Protein recA OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=recA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.703e-19 Identity = 44/100 (44.00%), Postives = 65/100 (65.00%), Query Frame = 2 Query: 59 PYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEENILEE 358 P++ AEF+IIFG+G+S+LGC+LD AE +V RKGAWYSY + L QGRD ++Y+ +NP IE++VR + G+V + + +EE + EE Sbjct: 258 PFRVAEFDIIFGKGISRLGCILDMAEETGVVNRKGAWYSYNGENLAQGRDNTIKYMEENPEFARNIEQLVRQKLEMGAVVSANSVAANETDAEEEYVEEE 357
BLAST of CF835635 vs. ExPASy Swiss-Prot
Match: RECA_PROMA (Protein recA OS=Prochlorococcus marinus GN=recA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.022e-19 Identity = 41/78 (52.56%), Postives = 59/78 (75.64%), Query Frame = 2 Query: 59 PYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGS 292 P++ AEF+I+FG+G+S LGC+LD AE +IV RKGAWYSY +GQGRD + +L +N +E+IEK+VR +++GS Sbjct: 272 PFRIAEFDILFGKGISTLGCLLDMAEETNIVTRKGAWYSYEGDNIGQGRDNTITWLEENSEAKEKIEKLVRQKLTEGS 349
BLAST of CF835635 vs. ExPASy Swiss-Prot
Match: RECA_GLOVI (Protein recA OS=Gloeobacter violaceus GN=recA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.022e-19 Identity = 43/78 (55.13%), Postives = 58/78 (74.36%), Query Frame = 2 Query: 59 PYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKALQYLRDNPLLQEEIEKVVRSMMSDGS 292 P+++AEF+IIFG+G+S LGC+LD A M+IV RKGAWYSYG +RLGQGR+ L L +N +EIE VR ++ G+ Sbjct: 270 PFRKAEFDIIFGKGISSLGCILDLAVEMEIVERKGAWYSYGSERLGQGRENVLALLEENAAQAQEIEIKVREKIASGA 347 The following BLAST results are available for this feature:
BLAST of CF835635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835635 ID=CF835635; Name=CF835635; organism=Citrus sinensis; type=EST; length=677bpback to top |