CF835744

Overview
NameCF835744
Unique NameCF835744
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length816
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF835744 vs. ExPASy Swiss-Prot
Match: NTPA_PEA (Nucleoside-triphosphatase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.664e-43
Identity = 87/175 (49.71%), Postives = 119/175 (68.00%), Query Frame = -2 
Query:  294 YDGSYKYGGEEYKASASPSGSNIEECQSVAIKALKVNDTCTHMQCTFXXXXXXXXXXGQKNMFVASFFFDRAAEAGFIDQNEPVAKVRPGDFESAAKRACQTKLEDAKSIYPRVDESNL-PYICMDLVYQHALLVVGFGLDPWQEITLVKQIKYQNSLVEAAWPLGSAIEAISSL 815
            ++G Y Y GEE+KA+A  SG+N  +C++   KALK+N  C +  CTF          GQKN+F +S FF    + G +D + P   +RP D E+ AK AC    EDAKS YP +D+ N+  Y+CMDL+YQ+ LLV GFGLDP Q+IT  K+I+YQ+++VEAAWPLG+A+EAIS+L
Sbjct:  271 FNGIYTYSGEEFKATAYTSGANFNKCKNTIRKALKLNYPCPYQNCTFGGIWNGGGGNGQKNLFASSSFFYLPEDTGMVDASTPNFILRPVDIETKAKEACALNFEDAKSTYPFLDKKNVASYVCMDLIYQYVLLVDGFGLDPLQKITSGKEIEYQDAIVEAAWPLGNAVEAISAL 445
[Close]
BLAST of CF835744 vs. ExPASy Swiss-Prot
Match: APY_SOLTU (Apyrase OS=Solanum tuberosum GN=RROP1 PE=1 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 3.470e-41
Identity = 79/172 (45.93%), Postives = 112/172 (65.12%), Query Frame = -2 
Query:  297 DGSYKYGGEEYKASASPSGSNIEECQSVAIKALKVNDTCTHMQCTFXXXXXXXXXXGQKNMFVASFFFDRAAEAGFIDQNEPVAKVRPGDFESAAKRACQTKLEDAKSIYPRVDESNLPYICMDLVYQHALLVVGFGLDPWQEITLVKQIKYQNSLVEAAWPLGSAIEAISS 812
            DG Y YGG +YK  A   GS+ + C+ +   ALK+N  C   +CTF          GQKN+  +SFF+D  A+ G +D   P A  +P  + +AAK ACQT + D KSI+P+  + N+PY+CMDL+Y++ LLV GFGL+P +EIT++  ++Y+N LV AAWPLG AI+ +SS
Sbjct:  273 DGYYSYGGVDYKVKAPKKGSSWKRCRRLTRHALKINAKCNIEECTFNGVWNGGGGDGQKNIHASSFFYDIGAQVGIVDTKFPSALAKPIQYLNAAKVACQTNVADIKSIFPKTQDRNIPYLCMDLIYEYTLLVDGFGLNPHKEITVIHDVQYKNYLVGAAWPLGCAIDLVSS 444
The following BLAST results are available for this feature:
BLAST of CF835744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
NTPA_PEA1.664e-4349.71Nucleoside-triphosphatase OS=Pisum sativum PE=2 SV... [more]
APY_SOLTU3.470e-4145.93Apyrase OS=Solanum tuberosum GN=RROP1 PE=1 SV=2[more]
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Properties
Property NameValue
Genbank descriptionUCRCS03_01M21_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01M21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835744 ID=CF835744; Name=CF835744; organism=Citrus sinensis; type=EST; length=816bp
TTTTTTTTTTTTTTTTTAATCCGAAAAATAAATGCAACATAAACTTTTCA
AAACACTCGACAAATTATAATCAGAACATTTTGTAACGTGATTACAAATG
ATAATAAATGGAACTAATATTCCCCCCCGGCGTTATTCCCAAGATATATA
GACCAAATTCAATTCCCAATCCAGGTTGATACTGATTCTGAGGCCACCGG
CCGTGGATACTTCAGCTTCAAATCCGCAGACACCCAAAAACCACACATTG
CTGAAGTTTAGATGAATAATTATGCGGAAACCTGATTCAATCCTAAAGAT
GAGATGGCCTCTATGGCACTGCCTAGTGGCCATGCTGCTTCGACAAGTGA
ATTTTGATATTTAATTTGCTTTACTAAGGTAATCTCTTGCCAGGGATCAA
GGCCAAATCCGACTACAAGCAATGCATGCTGGTAGACAAGATCCATGCAT
ATGTACGGCAGATTGCTCTCATCCACACGTGGATATATGGATTTTGCGTC
CTCAAGTTTAGTTTGGCAGGCACGCTTAGCTGCAGACTCAAAATCACCAG
GACGAACTTTGGCAACGGGTTCATTTTGGTCAATAAAACCAGCCTCGGCA
GCCCTGTCAAAGAAAAATGAAGCCACAAACATATTTTTTTGTCCATCACC
ACCTCCGCCGTTCCATACTCCACCGAATGTGCACTGCATGTGAGTACAAG
TATCATTAACTTTGAGAGCCTTGATAGCTACACTCTGACACTCCTCTATG
TTTGAACCTGATGGTGATGCTGATGCTTTGTATTCCTCTCCTCCATATTT
GTAAGATCCATCATAA
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