CF835779

Overview
NameCF835779
Unique NameCF835779
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF835779 vs. ExPASy Swiss-Prot
Match: GPT2_ARATH (Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=GPT2 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 9.663e-26
Identity = 57/71 (80.28%), Postives = 60/71 (84.51%), Query Frame = -2 
Query:  213 WVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRXXXXXXXXXIFHTPVQPVNALGAAIAILGTFIYSQ 425
            WV AQS+FYHLYNQVSYMSLDQISPLTFSIGNTMKR         IFHTP+QPVNALGAAIAI GTF+YSQ
Sbjct:  315 WVVAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVASIIIFHTPIQPVNALGAAIAIFGTFLYSQ 385
[Close]
BLAST of CF835779 vs. ExPASy Swiss-Prot
Match: GPT1_ARATH (Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.812e-25
Identity = 57/71 (80.28%), Postives = 60/71 (84.51%), Query Frame = -2 
Query:  213 WVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRXXXXXXXXXIFHTPVQPVNALGAAIAILGTFIYSQ 425
            WV AQS+FYHLYNQVSYMSLDQISPLTFS+GNTMKR         IF TPVQPVNALGAAIAILGTF+YSQ
Sbjct:  315 WVVAQSVFYHLYNQVSYMSLDQISPLTFSVGNTMKRISVIVSSIIIFRTPVQPVNALGAAIAILGTFLYSQ 385
[Close]
BLAST of CF835779 vs. ExPASy Swiss-Prot
Match: TPT2_BRAOB (Triose phosphate/phosphate translocator, non-green plastid, chloroplastic OS=Brassica oleracea var. botrytis GN=NGTPT PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.311e-11
Identity = 32/67 (47.76%), Postives = 43/67 (64.18%), Query Frame = -2 
Query:  210 SIFYHLYNQVSYMSLDQISPLTFSIGNTMKRXXXXXXXXXIFHTPVQPVNALGAAIAILGTFIYSQV 410
            ++ +H Y QVSYM L ++SP+T S+GN +KR          F TPV PVNA G  IA+ G F+YS+V
Sbjct:  326 ALCFHAYQQVSYMILARVSPVTHSVGNCVKRVVVIVSSVIFFKTPVSPVNAFGTGIALAGVFLYSRV 392
The following BLAST results are available for this feature:
BLAST of CF835779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
GPT2_ARATH9.663e-2680.28Glucose-6-phosphate/phosphate translocator 2, chlo... [more]
GPT1_ARATH2.812e-2580.28Glucose-6-phosphate/phosphate translocator 1, chlo... [more]
TPT2_BRAOB2.311e-1147.76Triose phosphate/phosphate translocator, non-green... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS03_01O02_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01O02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835779 ID=CF835779; Name=CF835779; organism=Citrus sinensis; type=EST; length=846bp
TTTTTTTTTTTTTTAACCCCTACTGGTAAATGGCCCTAAAGACGATTGAA
AGGCTGTTCTGCAGGTCTTTTGTCTCCATACAACCAAGTGGGCAGTACAA
AGCCAAAAGGAGGAAAAATTTTCTGCCAATTGTAAACCATTTGGTCCCCA
GGGAAAATGTGAACAACAATTTTGAATTTTTCATACTTGACTAGAAAGAT
ATGAGAATATACCTGTGAATAGATGAAGGTGCCGAGTATTGCAATGGCGG
CTCCAAGAGCATTGACGGGTTGAACTGGCGTGTGGAAGATGATGATGGAG
GAGACTATGACAGAGATTCGCTTCATTGTGTTGCCAATGCTGAATGTCAA
TGGAGAAATTTGATCGAGAGACATGTATGAAACTTGGTTGTACAAGTGAT
AGAAGATACTCTGTGCCGCTACCCACCTGTGACAATCCAGAGTCACAAAT
TTATCTTAGAAAAACATTGAGGAAGTTAACGAGTGCTCATTTTGGGACCA
CACGACTAAAAATTATTAAAATCTATAATGTTTCAAATCAAAATGGAACT
TTTTCTGATATCAAGCAGACAGGAAGTATCTATTTTCTTCAATTCTTGAG
AAATATCATGCAAATGCATCTAAAAGCAGATAAATCTACCTCCCATCACA
AAACAAAAATAATAAAATAAGACACCAGAGTTTTGGAGCTGAAATTCTAA
TGAACAAATGATGAGAAACTATTTGGCCTATAAACCATTCGACAAAAGCA
ATTTTAATTAATAAAATAGGCAATTTTAGTTGAGAAAAATTAAGAGCCTA
ACTGTCTGTCATCTGCGCGGATGCAAATGACACTTAAGCATAACTA
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