CF835811
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835811 vs. ExPASy Swiss-Prot
Match: IF5A5_SOLTU (Eukaryotic translation initiation factor 5A-5 OS=Solanum tuberosum GN=EIF5A5 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.140e-19 Identity = 46/61 (75.41%), Postives = 51/61 (83.61%), Query Frame = -1 Query: 189 DGFVSFWVENGNPKGDLRLPSDETLLAQVKDGFDEGKDLVLTVMFSMGGGQICALKDIGPK 371 DGFVS ENGN K DLRLP+D+TLLAQVKDGF EGKDLVL+VM +MG QIC +KDIGPK Sbjct: 99 DGFVSLLTENGNTKDDLRLPTDDTLLAQVKDGFAEGKDLVLSVMSAMGEEQICGIKDIGPK 159
BLAST of CF835811 vs. ExPASy Swiss-Prot
Match: IF5A1_SOLLC (Eukaryotic translation initiation factor 5A-1 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.140e-19 Identity = 46/61 (75.41%), Postives = 51/61 (83.61%), Query Frame = -1 Query: 189 DGFVSFWVENGNPKGDLRLPSDETLLAQVKDGFDEGKDLVLTVMFSMGGGQICALKDIGPK 371 DGFVS ENGN K DLRLP+D+TLLAQVKDGF EGKDLVL+VM +MG QIC +KDIGPK Sbjct: 99 DGFVSLLTENGNTKDDLRLPTDDTLLAQVKDGFAEGKDLVLSVMSAMGEEQICGIKDIGPK 159
BLAST of CF835811 vs. ExPASy Swiss-Prot
Match: IF5A2_NICPL (Eukaryotic translation initiation factor 5A-2 OS=Nicotiana plumbaginifolia GN=EIF-5A2 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.392e-19 Identity = 44/61 (72.13%), Postives = 50/61 (81.97%), Query Frame = -1 Query: 189 DGFVSFWVENGNPKGDLRLPSDETLLAQVKDGFDEGKDLVLTVMFSMGGGQICALKDIGPK 371 DGFVS ENGN K DLRLP+D+ LL Q+KDGF EGKDLV++VM +MG QICALKDIGPK Sbjct: 99 DGFVSLLTENGNTKDDLRLPTDDNLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159
BLAST of CF835811 vs. ExPASy Swiss-Prot
Match: IF5A_SENVE (Eukaryotic translation initiation factor 5A OS=Senecio vernalis GN=EIFSV1 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.261e-18 Identity = 43/61 (70.49%), Postives = 50/61 (81.97%), Query Frame = -1 Query: 189 DGFVSFWVENGNPKGDLRLPSDETLLAQVKDGFDEGKDLVLTVMFSMGGGQICALKDIGPK 371 DGFVS ENGN K DL+LP+D+ LL Q+KDGF EGKDLV++VM +MG QICALKDIGPK Sbjct: 99 DGFVSLLTENGNTKDDLKLPTDDALLTQIKDGFGEGKDLVVSVMSAMGEEQICALKDIGPK 159
BLAST of CF835811 vs. ExPASy Swiss-Prot
Match: IF5A4_SOLLC (Eukaryotic translation initiation factor 5A-4 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.668e-18 Identity = 44/62 (70.97%), Postives = 51/62 (82.26%), Query Frame = -1 Query: 186 DGFVSFWVENGNPKGDLRLPSDETLLAQVKDGFDEGKDLVLTVMFSMGGGQICALKDIGPKS 371 DGFVS ENGN K DLRLP+D+TLL QVK GF+EGKDLVL+VM +MG QICA+KDIG K+ Sbjct: 99 DGFVSLLTENGNTKDDLRLPTDDTLLNQVKGGFEEGKDLVLSVMSAMGEEQICAVKDIGTKT 160
BLAST of CF835811 vs. ExPASy Swiss-Prot
Match: IF5A1_TOBAC (Eukaryotic translation initiation factor 5A-1 OS=Nicotiana tabacum GN=EIF-5A1 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.791e-18 Identity = 42/61 (68.85%), Postives = 49/61 (80.33%), Query Frame = -1 Query: 189 DGFVSFWVENGNPKGDLRLPSDETLLAQVKDGFDEGKDLVLTVMFSMGGGQICALKDIGPK 371 DGFVS ENGN K DLRLP+D+ LLA +KDGF EGKDLVL+VM +MG QIC +KD+GPK Sbjct: 99 DGFVSLLTENGNTKDDLRLPTDDNLLALIKDGFAEGKDLVLSVMSAMGEEQICGIKDVGPK 159
BLAST of CF835811 vs. ExPASy Swiss-Prot
Match: IF5A1_NICPL (Eukaryotic translation initiation factor 5A-1 OS=Nicotiana plumbaginifolia GN=EIF-5A1 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.791e-18 Identity = 42/61 (68.85%), Postives = 49/61 (80.33%), Query Frame = -1 Query: 189 DGFVSFWVENGNPKGDLRLPSDETLLAQVKDGFDEGKDLVLTVMFSMGGGQICALKDIGPK 371 DGFVS ENGN K DLRLP+D+ LLA +KDGF EGKDLVL+VM +MG QIC +KD+GPK Sbjct: 99 DGFVSLLTENGNTKDDLRLPTDDNLLALIKDGFAEGKDLVLSVMSAMGEEQICGIKDVGPK 159
BLAST of CF835811 vs. ExPASy Swiss-Prot
Match: IF5A_MANES (Eukaryotic translation initiation factor 5A OS=Manihot esculenta PE=2 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 6.257e-18 Identity = 42/62 (67.74%), Postives = 51/62 (82.26%), Query Frame = -1 Query: 186 DGFVSFWVENGNPKGDLRLPSDETLLAQVKDGFDEGKDLVLTVMFSMGGGQICALKDIGPKS 371 DGFVS E GN K DLRLP+DE LL+Q+KDGF EGKDLV++VM +MG +IC+LKDIGPK+ Sbjct: 99 DGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVSVMSAMGEERICSLKDIGPKN 160
BLAST of CF835811 vs. ExPASy Swiss-Prot
Match: IF5A_MAIZE (Eukaryotic translation initiation factor 5A OS=Zea mays GN=TIF5A PE=1 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 6.257e-18 Identity = 41/61 (67.21%), Postives = 50/61 (81.97%), Query Frame = -1 Query: 189 DGFVSFWVENGNPKGDLRLPSDETLLAQVKDGFDEGKDLVLTVMFSMGGGQICALKDIGPK 371 DGFVS +GN K DLRLP+DETL+AQ+K+GF+ GKDLV+TV +MG QICALKD+GPK Sbjct: 100 DGFVSLLTSDGNTKDDLRLPTDETLVAQIKEGFESGKDLVVTVQSAMGEEQICALKDVGPK 160
BLAST of CF835811 vs. ExPASy Swiss-Prot
Match: IF5A1_SOLTU (Eukaryotic translation initiation factor 5A-1/2 OS=Solanum tuberosum GN=EIF5A1 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.257e-18 Identity = 44/62 (70.97%), Postives = 50/62 (80.65%), Query Frame = -1 Query: 186 DGFVSFWVENGNPKGDLRLPSDETLLAQVKDGFDEGKDLVLTVMFSMGGGQICALKDIGPKS 371 DGFVS ENGN K DLRLP+D+ LL QVK GF+EGKDLVL+VM +MG QICA+KDIG KS Sbjct: 99 DGFVSLLTENGNTKDDLRLPTDDALLNQVKGGFEEGKDLVLSVMSAMGEEQICAVKDIGTKS 160 The following BLAST results are available for this feature:
BLAST of CF835811 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835811 ID=CF835811; Name=CF835811; organism=Citrus sinensis; type=EST; length=371bpback to top |