CF835832
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835832 vs. ExPASy Swiss-Prot
Match: RL27_PEA (60S ribosomal protein L27 OS=Pisum sativum GN=RPL27 PE=2 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 4.303e-64 Identity = 121/135 (89.63%), Postives = 126/135 (93.33%), Query Frame = 3 Query: 30 MVKFLKPNMAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 434 MVKFLKPN AVILLQGRYAG+KAVIVK+FDDGTRE+ YGHCLVAGIKK+P KVI+KDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKD V D LQSKDKKVTA KETKK LEERFKTGKNRWFFTKLRF Sbjct: 1 MVKFLKPNKAVILLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKFPSKVIKKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKKSLEERFKTGKNRWFFTKLRF 135
BLAST of CF835832 vs. ExPASy Swiss-Prot
Match: RL273_ARATH (60S ribosomal protein L27-3 OS=Arabidopsis thaliana GN=RPL27C PE=2 SV=2) HSP 1 Score: 235.728 bits (600), Expect = 1.531e-61 Identity = 114/135 (84.44%), Postives = 123/135 (91.11%), Query Frame = 3 Query: 30 MVKFLKPNMAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 434 MVKFLK N AVILLQGRYAG+KAVI+KSFDDG R+R YGHCLVAG+KKYP KVIRKDSAKKTAKKSRVK F+KLVNYQHLMPTRYTLDVDLK+V + D+LQSKDKKV A KE K +LEERFKTGKNRWFFTKLRF Sbjct: 1 MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEERFKTGKNRWFFTKLRF 135
BLAST of CF835832 vs. ExPASy Swiss-Prot
Match: RL272_ARATH (60S ribosomal protein L27-2 OS=Arabidopsis thaliana GN=RPL27B PE=2 SV=2) HSP 1 Score: 235.728 bits (600), Expect = 1.531e-61 Identity = 114/135 (84.44%), Postives = 124/135 (91.85%), Query Frame = 3 Query: 30 MVKFLKPNMAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 434 MVKFLK N AVILLQGRYAG+KAVI+KSFDDGT +R YGHCLVAG+KKYP KVIRKDSAKKTAKKSRVK F+KLVNYQHLMPTRYTLDVDLK+V + D+L+SKDKKVTA KE K +LEERFKTGKNRWFFTKLRF Sbjct: 1 MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGTSDRRYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALKSKDKKVTALKEAKAKLEERFKTGKNRWFFTKLRF 135
BLAST of CF835832 vs. ExPASy Swiss-Prot
Match: RL271_ARATH (60S ribosomal protein L27-1 OS=Arabidopsis thaliana GN=RPL27A PE=2 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 7.110e-59 Identity = 109/135 (80.74%), Postives = 121/135 (89.63%), Query Frame = 3 Query: 30 MVKFLKPNMAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 434 MVK +KP AVILLQGRY G+KAVIVKSFDDGT E+ YGHCLVAG+KKYP KVIRKDSAKKTAKKSRVK F K++NYQH+MPTRYTLD+DLK+VVSAD++ SKDKKVTA KE K + EERFKTGKNRWFFTKLRF Sbjct: 1 MVKCMKPGKAVILLQGRYTGKKAVIVKSFDDGTVEKKYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFFKVINYQHVMPTRYTLDLDLKNVVSADAISSKDKKVTALKEAKAKFEERFKTGKNRWFFTKLRF 135
BLAST of CF835832 vs. ExPASy Swiss-Prot
Match: RL27_SOLTU (60S ribosomal protein L27 OS=Solanum tuberosum GN=RPL27 PE=2 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.255e-55 Identity = 109/139 (78.42%), Postives = 121/139 (87.05%), Query Frame = 3 Query: 30 MVKFLKPNMAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL----KDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 434 M KFLKPN AVILLQG+YAGRKAVIV++FD+GTR+R YGHCLVAGI +YP KVIRKDSAKK KKSRVKAF+KLVNY H+MPTRYTLD DL KDVV+AD LQ++DKKVTA + TK RL ERFKTGKNRWFFTKLRF Sbjct: 1 MEKFLKPNKAVILLQGKYAGRKAVIVRAFDEGTRDRPYGHCLVAGISRYPKKVIRKDSAKKAGKKSRVKAFIKLVNYNHIMPTRYTLDEDLKDVVKDVVNADVLQARDKKVTA-RRTKARLAERFKTGKNRWFFTKLRF 138
BLAST of CF835832 vs. ExPASy Swiss-Prot
Match: RL27_PYRST (60S ribosomal protein L27 OS=Pyrobotrys stellata GN=RPL27 PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.102e-43 Identity = 87/135 (64.44%), Postives = 105/135 (77.78%), Query Frame = 3 Query: 30 MVKFLKPNMAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 434 MVKFLK V++L GR+AG+KAVIV++FDDGT R YGH LV G++K P KV ++ S KK AKKS +K F+K VNY HLMPTRYTLDVD K V+A++ ++ KKV A KE KK LEE+FKTGKNRWFFTKLRF Sbjct: 1 MVKFLKSGKVVVVLSGRFAGKKAVIVRNFDDGTSSRPYGHALVVGLQKEPRKVTKRQSQKKQAKKSTLKTFIKTVNYNHLMPTRYTLDVDFKG-VAAEAQENPTKKVEARKECKKLLEEKFKTGKNRWFFTKLRF 134
BLAST of CF835832 vs. ExPASy Swiss-Prot
Match: RL27_HIPCM (60S ribosomal protein L27 OS=Hippocampus comes GN=rpl27 PE=2 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 2.378e-38 Identity = 79/136 (58.09%), Postives = 98/136 (72.06%), Query Frame = 3 Query: 30 MVKFLKPNMAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 434 M KF+KP V++L GRYAGRKAVIVK+ DDGT +R Y H LVAGI +YP KV KK AK+S++KAFVK+ NY HLMPTRY++D+ L K VV+ D + K A +E K + EER+KTGKN+WFF KLRF Sbjct: 1 MGKFMKPGKVVMVLAGRYAGRKAVIVKNIDDGTADRPYSHALVAGIDRYPRKVTAPMGKKKIAKRSKIKAFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKSKARREAKVKFEERYKTGKNKWFFQKLRF 136
BLAST of CF835832 vs. ExPASy Swiss-Prot
Match: RL27_DANRE (60S ribosomal protein L27 OS=Danio rerio GN=rpl27 PE=2 SV=3) HSP 1 Score: 158.303 bits (399), Expect = 3.106e-38 Identity = 79/136 (58.09%), Postives = 98/136 (72.06%), Query Frame = 3 Query: 30 MVKFLKPNMAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 434 M KF+KP V++L GRYAGRKAVIVK+ DDGT +R Y H LVAGI +YP KV KK AK+S++KAFVK+ NY HLMPTRY++D+ L K VV+ D + K A +E K + EER+KTGKN+WFF KLRF Sbjct: 1 MGKFMKPGKVVMVLAGRYAGRKAVIVKNIDDGTADRPYSHALVAGIDRYPRKVTATMGKKKIAKRSKIKAFVKVFNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
BLAST of CF835832 vs. ExPASy Swiss-Prot
Match: RL27_ICTPU (60S ribosomal protein L27 OS=Ictalurus punctatus GN=rpl27 PE=2 SV=3) HSP 1 Score: 157.147 bits (396), Expect = 6.918e-38 Identity = 77/136 (56.62%), Postives = 98/136 (72.06%), Query Frame = 3 Query: 30 MVKFLKPNMAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 434 M KF+KP V++L GRYAGRKAVIVK+ DDGT +R Y H LV+GI +YP KV KK AK+S++KAFVK+ NY HLMPTRY++D+ L K +V+ D + K A +E K + EER+KTGKN+WFF KLRF Sbjct: 1 MGKFMKPGKVVMVLAGRYAGRKAVIVKNIDDGTADRPYSHALVSGIDRYPRKVTATMGKKKVAKRSKIKAFVKVFNYNHLMPTRYSVDIPLDKTIVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
BLAST of CF835832 vs. ExPASy Swiss-Prot
Match: RL27_RAT (60S ribosomal protein L27 OS=Rattus norvegicus GN=Rpl27 PE=2 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 1.180e-37 Identity = 77/136 (56.62%), Postives = 98/136 (72.06%), Query Frame = 3 Query: 30 MVKFLKPNMAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 434 M KF+KP V++L GRY+GRKAVIVK+ DDGT +R Y H LVAGI +YP KV KK AK+S++K+FVK+ NY HLMPTRY++D+ L K VV+ D + K A +E K + EER+KTGKN+WFF KLRF Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136 The following BLAST results are available for this feature:
BLAST of CF835832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835832 ID=CF835832; Name=CF835832; organism=Citrus sinensis; type=EST; length=645bpback to top |