CF835983
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835983 vs. ExPASy Swiss-Prot
Match: VATG_CITLI (V-type proton ATPase subunit G OS=Citrus limon GN=VATG PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.775e-34 Identity = 79/110 (71.82%), Postives = 79/110 (71.82%), Query Frame = 3 Query: 39 MASNRGHGGIXXXXXXXXXXXHIVAAARNAKMARLXXXXXXXXXXXXXXXXQVEREFQRKLAESSGDSGANVKRLEQETEVKIHHLKAGAEKIQYDVVQMLLKHVTTVKN 368 M SNRG GGI HIVAAARNAKMARL QVEREFQRKLAES GDSGANVKRLEQETEVKIHHLKAGAEKIQYDVVQM LKHVTTVKN Sbjct: 1 MTSNRGQGGIQQLLAAEQEAQHIVAAARNAKMARLKQAKEEAEREIAEYRAQVEREFQRKLAESVGDSGANVKRLEQETEVKIHHLKAGAEKIQYDVVQMFLKHVTTVKN 110
BLAST of CF835983 vs. ExPASy Swiss-Prot
Match: VAGT1_ARATH (V-type proton ATPase subunit G1 OS=Arabidopsis thaliana GN=VHA-G1 PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 7.574e-24 Identity = 62/110 (56.36%), Postives = 68/110 (61.82%), Query Frame = 3 Query: 39 MASNRGHGGIXXXXXXXXXXXHIVAAARNAKMARLXXXXXXXXXXXXXXXXQVEREFQRKLAESSGDSGANVKRLEQETEVKIHHLKAGAEKIQYDVVQMLLKHVTTVKN 368 M SNRG G I HIV AAR AKMARL Q E++FQRKL E+SGDSGANVKRLEQET+ KI LK A +I DVV+MLLKHVTTVKN Sbjct: 1 MESNRGQGSIQQLLAAEVEAQHIVNAARTAKMARLKQAKEEAEKEIAEYKAQTEQDFQRKLEETSGDSGANVKRLEQETDTKIEQLKNEASRISKDVVEMLLKHVTTVKN 110
BLAST of CF835983 vs. ExPASy Swiss-Prot
Match: VATG1_TOBAC (V-type proton ATPase subunit G 1 OS=Nicotiana tabacum GN=VATG1 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.428e-22 Identity = 59/110 (53.64%), Postives = 67/110 (60.91%), Query Frame = 3 Query: 39 MASNRGHGGIXXXXXXXXXXXHIVAAARNAKMARLXXXXXXXXXXXXXXXXQVEREFQRKLAESSGDSGANVKRLEQETEVKIHHLKAGAEKIQYDVVQMLLKHVTTVKN 368 MAS+ G GI HIV AR AK ARL +E EFQRKL ++SGDSGANVKRLEQET+ KI HLK AE++ DVVQMLL+HVTTVKN Sbjct: 1 MASSSGQNGIQLLLAAEQEAQHIVNNARTAKQARLKQAKEEAEKEIAEFRAYMEAEFQRKLEQTSGDSGANVKRLEQETDAKIEHLKTEAERVSPDVVQMLLRHVTTVKN 110
BLAST of CF835983 vs. ExPASy Swiss-Prot
Match: VATG2_TOBAC (V-type proton ATPase subunit G 2 OS=Nicotiana tabacum GN=VATG2 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.636e-20 Identity = 57/111 (51.35%), Postives = 64/111 (57.66%), Query Frame = 3 Query: 39 MASNRG-HGGIXXXXXXXXXXXHIVAAARNAKMARLXXXXXXXXXXXXXXXXQVEREFQRKLAESSGDSGANVKRLEQETEVKIHHLKAGAEKIQYDVVQMLLKHVTTVKN 368 M SNRG GI HIV AAR K AR+ +E EFQR + ++SGDSGANVKRLEQET KI HLK AE I +DVVQMLL+ VTTVKN Sbjct: 1 MESNRGSQNGIQLLLGAEQEAQHIVNAARTGKQARMKQAKEEAEKEIAEFRAYMEAEFQRNVEQTSGDSGANVKRLEQETFAKIQHLKTEAESISHDVVQMLLRQVTTVKN 111
BLAST of CF835983 vs. ExPASy Swiss-Prot
Match: VATG2_ARATH (V-type proton ATPase subunit G2 OS=Arabidopsis thaliana GN=VHA-G2 PE=2 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 3.408e-16 Identity = 49/88 (55.68%), Postives = 54/88 (61.36%), Query Frame = 3 Query: 105 IVAAARNAKMARLXXXXXXXXXXXXXXXXQVEREFQRKLAESSGDSGANVKRLEQETEVKIHHLKAGAEKIQYDVVQMLLKHVTTVKN 368 IV AAR AKM RL E+ FQRKL +SGDSGANVKRLEQET+ KI LK A +I DVV MLLK+VTTV N Sbjct: 19 IVNAARTAKMTRLKQAKEEAETEVAEHKTSTEQGFQRKLEATSGDSGANVKRLEQETDAKIEQLKNEATRISKDVVDMLLKNVTTVNN 106
BLAST of CF835983 vs. ExPASy Swiss-Prot
Match: VATG3_ARATH (V-type proton ATPase subunit G3 OS=Arabidopsis thaliana GN=VHA-G3 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.301e-11 Identity = 40/107 (37.38%), Postives = 59/107 (55.14%), Query Frame = 3 Query: 39 MASNRGHGGIXXXXXXXXXXXHIVAAARNAKMARLXXXXXXXXXXXXXXXXQVEREFQRKLAESSGDSGANVKRLEQETEVKIHHLKAGAEKIQYDVVQMLLKHVTT 359 M S RG GGI IV+AAR AK+AR+ ++E E+Q ++ S D A+ KRL+ ET+V+I +LK + K+ D+V+ML+K+VTT Sbjct: 1 MDSLRGQGGIQMLLTAEQEAGRIVSAARTAKLARMKQAKDEAEKEMEEYRSRLEEEYQTQV--SGTDQEADAKRLDDETDVRITNLKESSSKVSKDIVKMLIKYVTT 105 The following BLAST results are available for this feature:
BLAST of CF835983 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835983 ID=CF835983; Name=CF835983; organism=Citrus sinensis; type=EST; length=571bpback to top |