CF836045
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836045 vs. ExPASy Swiss-Prot
Match: SPL13_ARATH (Squamosa promoter-binding-like protein 13 OS=Arabidopsis thaliana GN=SPL13 PE=2 SV=2) HSP 1 Score: 216.853 bits (551), Expect = 1.011e-55 Identity = 116/218 (53.21%), Postives = 147/218 (67.43%), Query Frame = 2 Query: 65 MDWNLKPAWDFTE-FEQEAIPNVDAVDES-----SSRTKGNFSVDLKLGQVNSSAED---------SLNKCKEPGASKMESPSPSGSFKRARAANNGS-QTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGKRSCRKRLDGHNRRRRKPQPDQLSRTGTFLSNYQGASLLPFS-SSHMYPSATVVKPTW 667 MDWN K + + F+QE P++ +D S SS++K +FS DLKLG+ ++ SL+K K+ +K E S S S KR R G+ Q CLVDGCDSD SNCR+YH+RHKVC++HSKTP V I G KQRFCQQCSRFH LEEFDEGKRSCRKRLDGHNRRRRKPQP+ + R F + +QG+ LL FS SH++P+ +V+ P+W Sbjct: 1 MDWNFKLSSGYLSGFDQE--PDLSPMDGSISFGGSSQSKADFSFDLKLGRNIGNSSSVFGDTEQVISLSKWKDSALAKPEG-SRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPANFFTGFQGSKLLEFSGGSHVFPTTSVLNPSW 215
BLAST of CF836045 vs. ExPASy Swiss-Prot
Match: SPL18_ORYSJ (Squamosa promoter-binding-like protein 18 OS=Oryza sativa subsp. japonica GN=SPL18 PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.324e-47 Identity = 114/265 (43.02%), Postives = 152/265 (57.36%), Query Frame = 2 Query: 65 MDWNLKP--AWDFTEFEQEAIPNVDAVDESS-------SRTKG-----NFSVDLKLGQVNS-SAEDSLNK----CKEP------GASKMESPSPSGSFKRARAANNGS--QTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGKRSCRKRLDGHNRRRRKPQPDQLSRTGTFLSNYQGASLLPFSSSHMYPSATVVKPTWTGVVNTEADARCYNEHHRLN--LPDERNLFFRSPSSS 772 MDW+LK +WD E E A+PN+ A ++ + ++G SVDLKLG + A D+L + K P AS + P + + KR R G Q SC VDGC +DLS RDYHRRHKVCE HSKTP V++ G++ RFCQQCSRFH L EFDE KRSCRKRLDGHNRRRRKPQ D +S +G+F+++ QG F+ +P+W G++ +E + Y+ HH + + + F SPSS+ Sbjct: 1 MDWDLKMPVSWDLAELEHNAVPNMAAAASAAEPGIAAVAASRGAPGRPECSVDLKLGGLGEFGAADALKEPAAAAKAPVSSAAAAASVAKVPPSTSTLKRPRGGGGGGGGQCPSCAVDGCKADLSKHRDYHRRHKVCEPHSKTPVVVVSGREMRFCQQCSRFHLLGEFDEAKRSCRKRLDGHNRRRRKPQADSMS-SGSFMTSQQGTRFASFTPPR-------PEPSWPGIIKSE-ETPYYSHHHHPHPVMTSRQPHFVGSPSSA 256
BLAST of CF836045 vs. ExPASy Swiss-Prot
Match: SPL16_ORYSJ (Squamosa promoter-binding-like protein 16 OS=Oryza sativa subsp. japonica GN=SPL16 PE=2 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 7.266e-46 Identity = 112/252 (44.44%), Postives = 141/252 (55.95%), Query Frame = 2 Query: 65 MDWNLK----PAWDFT-EFEQEAIPNVDAVDESSSRTKGN-----------FSVDLKLG------------QVNSSAEDSLNKCKEPGASKMESPSPSGSFKRAR--AANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGKRSCRKRLDGHNRRRRKPQPDQLSRTGTFLSNYQGASLLPFSSSHMYPSATVVKPTWTGVVNTEADARCYNEHHRLNL 730 M+W+LK +W+ E E V A SSS G SVDLKLG +V + E + K A+ + + S KR R AA Q SC VDGC DLS CRDYHRRHKVCE HSKTP V++ G++ RFCQQCSRFH L+EFDE KRSCRKRLDGHNRRRRKPQPD ++ + ++L++ QGA PF++ P A +WTG++ TE Y HH++ L Sbjct: 1 MEWDLKMPPAASWELADELENSGGGGVPAAVSSSSAAVGGGVNAGGGGRQECSVDLKLGGLGEFGGGGAQPRVAVAGEPAKGKGPAAAATGAAAAASSAPAKRPRGAAAAGQQQCPSCAVDGCKEDLSKCRDYHRRHKVCEAHSKTPLVVVSGREMRFCQQCSRFHLLQEFDEAKRSCRKRLDGHNRRRRKPQPDPMN-SASYLASQQGARFSPFATPR--PEA-----SWTGMIKTEESP--YYTHHQIPL 242
BLAST of CF836045 vs. ExPASy Swiss-Prot
Match: SPL2_ORYSJ (Squamosa promoter-binding-like protein 2 OS=Oryza sativa subsp. japonica GN=SPL2 PE=2 SV=2) HSP 1 Score: 162.155 bits (409), Expect = 2.957e-39 Identity = 110/243 (45.27%), Postives = 136/243 (55.97%), Query Frame = 2 Query: 65 MDWNLK-PAWDFTEFEQEAIPNVDAVDESSSRTKGNFSVDLKLG-----------QVNSSAEDSLNKCKEPGASKMESPSPSGSFKRARAANNGSQTA--SCLVDGCDSDLSNC-RDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGKRSCRKRLDGHNRRRRKPQPDQLSRTGTFLSNYQGASLLPFSSSHMYPSATVVKPTWT----GVVNTEADARCYNE--HHRLNL 730 MDW+ K P+WD V G ++DLKLG S+A ++ P AS S + +G KRARA G Q A +C V+GC +DLS C RDYHRRHKVCE HSKT V + GQ+QRFCQQCSRFH L EFDE KRSCRKRLDGHN+RRRKPQPD L+ G +N+ GA+ S ++ +A + P T VV TEA A + E +H L+L Sbjct: 1 MDWDAKMPSWDLGTV-------VGPSGGGGGGGGGGGALDLKLGAPTSWKTTTTVSAASAAPAAVAPPPPPPASSSSSAAAAG--KRARAGQ-GQQAAVPACSVEGCAADLSKCVRDYHRRHKVCEAHSKTAVVTVAGQQQRFCQQCSRFHLLGEFDEEKRSCRKRLDGHNKRRRKPQPDPLN-PGNLFANHHGAARFT-SYPQIFSTAASMSPQETKWPANVVKTEA-ADVFQEPYYHALHL 230
BLAST of CF836045 vs. ExPASy Swiss-Prot
Match: SPL19_ORYSJ (Putative squamosa promoter-binding-like protein 19 OS=Oryza sativa subsp. japonica GN=SPL19 PE=3 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 2.590e-35 Identity = 76/143 (53.15%), Postives = 92/143 (64.34%), Query Frame = 2 Query: 284 KRARAANNGSQ-----TASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGKRSCRKRLDGHNRRRRKPQPDQLSRTGTFLSNYQGASLLPFSSSHMYPSATVVKPTWTGVVNTEADA 697 +RAR + G +C VDGC SDLS CRDYHRRHKVCE H+KTP V++ GQ+QRFCQQCSRFH L EFD+GK+SCRKRLDGHNRRRRKPQ D L+ S LP+ ++ + V P + + ADA Sbjct: 74 RRARGGSGGGGGGGGGAEACSVDGCRSDLSRCRDYHRRHKVCEAHAKTPVVVVAGQEQRFCQQCSRFHNLAEFDDGKKSCRKRLDGHNRRRRKPQHDALN----------PRSFLPYHQANQFS----VYPQTFPIADQNADA 202
BLAST of CF836045 vs. ExPASy Swiss-Prot
Match: SPL16_ARATH (Squamosa promoter-binding-like protein 16 OS=Arabidopsis thaliana GN=SPL16 PE=2 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 1.019e-31 Identity = 78/181 (43.09%), Postives = 93/181 (51.38%), Query Frame = 2 Query: 68 DWNLKP-AWDFTEFEQEAIPNVDAVDESSSRTKGNFSVDLKLGQVNSSAEDSLNKCKEPGASKMESPSPSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGKRSCRKRLDGHNRRRRKPQPDQLSRTGTFLSNYQGAS 607 DW + WD FE + S + +DL L + E + P + K+ S SP G C VD C DLS +DYHRRHKVCE+HSK + L+ Q QRFCQQCSRFH L EFDEGKRSCR+RLDGHNRRRRK QPD ++ L N S Sbjct: 8 DWQMNRWKWDGQRFEAIELQG------ESLQLSNKKGLDLNLPCGFNDVEGTPVDLTRP-SKKVRSGSPGSG------GGGGGNYPKCQVDNCKEDLSIAKDYHRRHKVCEVHSKATKALVGKQMQRFCQQCSRFHLLSEFDEGKRSCRRRLDGHNRRRRKTQPDAITSQVVALENRDNTS 175
BLAST of CF836045 vs. ExPASy Swiss-Prot
Match: SPL14_ARATH (Squamosa promoter-binding-like protein 14 OS=Arabidopsis thaliana GN=SPL14 PE=2 SV=3) HSP 1 Score: 136.346 bits (342), Expect = 1.737e-31 Identity = 78/173 (45.09%), Postives = 103/173 (59.54%), Query Frame = 2 Query: 68 DWNLKPAWDFTEFEQEAIPNVDAVDESSSRTKGNFS-----VDLKLGQVNSSAEDSLNKCKEPGASKMESPSPSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGKRSCRKRLDGHNRRRRK-PQPDQLS 568 +WN K WD+ EA P VD + T N S +DL LG ++ E++ + ++ P+ K+ R+ + G C VD C DLS+ +DYHRRHKVCE+HSK + L+ Q QRFCQQCSRFH L EFDEGKRSCR+RL GHNRRRRK QP++++ Sbjct: 42 EWNSK-MWDWDSRRFEAKP-VDVEVQEFDLTLRNRSGEERGLDLNLGSGLTAVEET--------TTTTQNVRPN---KKVRSGSPGGNYPMCQVDNCTEDLSHAKDYHRRHKVCEVHSKATKALVGKQMQRFCQQCSRFHLLSEFDEGKRSCRRRLAGHNRRRRKTTQPEEVA 201
BLAST of CF836045 vs. ExPASy Swiss-Prot
Match: SPL3_ORYSJ (Squamosa promoter-binding-like protein 3 OS=Oryza sativa subsp. japonica GN=SPL3 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.870e-31 Identity = 68/141 (48.23%), Postives = 93/141 (65.96%), Query Frame = 2 Query: 176 VDLKLGQVNSSAED---SLNKCKEPGASKMESPSPSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGKRSCRKRLDGHNRRRRKPQPDQLSRTGTFLS 589 + LKLG+ + ED N P + +PSP G K+ + A +Q C V+GC+ DLS+ + YHR+H+VCE HSKT +V++ G ++RFCQQCSRFH L EFD+ KRSCR+RL HN RRRKPQP+ +S + + LS Sbjct: 131 IGLKLGK-RTYFEDVCGGQNVKSSPSGVSVATPSP-GLAKKVKVAQQNTQNPHCQVEGCNVDLSSAKPYHRKHRVCEPHSKTLKVIVAGLERRFCQQCSRFHGLAEFDQKKRSCRRRLHDHNARRRKPQPEAISLSSSRLS 269
BLAST of CF836045 vs. ExPASy Swiss-Prot
Match: SPL3_ORYSI (Squamosa promoter-binding-like protein 3 OS=Oryza sativa subsp. indica GN=SPL3 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.870e-31 Identity = 68/141 (48.23%), Postives = 93/141 (65.96%), Query Frame = 2 Query: 176 VDLKLGQVNSSAED---SLNKCKEPGASKMESPSPSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGKRSCRKRLDGHNRRRRKPQPDQLSRTGTFLS 589 + LKLG+ + ED N P + +PSP G K+ + A +Q C V+GC+ DLS+ + YHR+H+VCE HSKT +V++ G ++RFCQQCSRFH L EFD+ KRSCR+RL HN RRRKPQP+ +S + + LS Sbjct: 131 IGLKLGK-RTYFEDVCGGQNVKSSPSGVSVATPSP-GLAKKVKVAQQNTQNPHCQVEGCNVDLSSAKPYHRKHRVCEPHSKTLKVIVAGLERRFCQQCSRFHGLAEFDQKKRSCRRRLHDHNARRRKPQPEAISLSSSRLS 269
BLAST of CF836045 vs. ExPASy Swiss-Prot
Match: SPL12_ARATH (Squamosa promoter-binding-like protein 12 OS=Arabidopsis thaliana GN=SPL12 PE=1 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.277e-30 Identity = 61/101 (60.40%), Postives = 74/101 (73.27%), Query Frame = 2 Query: 311 SQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFDEGKRSCRKRLDGHNRRRRKPQPDQLSRTGTFLSNYQGASLL 613 S+ C VD C +DLS +DYHRRHKVCE+HSK L+ G QRFCQQCSRFH LEEFDEGKRSCR+RL GHN+RRRK PD + GT +S+ Q ++ + Sbjct: 122 SRAICCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFDEGKRSCRRRLAGHNKRRRKANPDTIG-NGTSMSDDQTSNYM 221 The following BLAST results are available for this feature:
BLAST of CF836045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836045 ID=CF836045; Name=CF836045; organism=Citrus sinensis; type=EST; length=774bpback to top |