CF836132

Overview
NameCF836132
Unique NameCF836132
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length714
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2224 contig Csv1_Contig2224:396..1109. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF836132 vs. ExPASy Swiss-Prot
Match: XTH23_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana GN=XTH23 PE=2 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 3.701e-78
Identity = 130/177 (73.45%), Postives = 147/177 (83.05%), Query Frame = -1
Query:  196 GNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACV----WXXXXXXXXXXXXNPWFSQELDATGQERLKWVQKNYMIYNYCKDSKRFPQGLPKEC 714
            GNLSGDPYTLHTNVFT GKGDREQQF LWFDPT+DFHTYS+LWNPQRI+F VDG+PIREFKN+ES G LFPKNQPMR+YSSLWNA++WATRGGL+KTDW++APFTASYR FN  ACV                   W SQELD+TGQE+++WVQ NYMIYNYC D+KRFPQGLP+EC
Sbjct:  107 GNLSGDPYTLHTNVFTQGKGDREQQFKLWFDPTSDFHTYSILWNPQRIIFSVDGTPIREFKNMESQGTLFPKNQPMRMYSSLWNAEEWATRGGLVKTDWSKAPFTASYRGFNEEACVVINGQSSCPNVSGQGSTGSWLSQELDSTGQEQMRWVQNNYMIYNYCTDAKRFPQGLPREC 283          
BLAST of CF836132 vs. ExPASy Swiss-Prot
Match: XTH22_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana GN=XTH22 PE=1 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 1.555e-76
Identity = 126/178 (70.79%), Postives = 146/178 (82.02%), Query Frame = -1
Query:  196 GNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVW-----XXXXXXXXXXXXNPWFSQELDATGQERLKWVQKNYMIYNYCKDSKRFPQGLPKEC 714
            GN SG+PYTLHTNV+T GKGD+EQQF LWFDPTA+FHTY++LWNPQRI+F VDG+PIREFKN+ES G LFPKN+PMR+YSSLWNADDWATRGGL+KTDW++APFTASYR F   ACVW                   W SQELD+T Q+R++WVQ+NYMIYNYC D+KRFPQGLPKEC
Sbjct:  104 GNSSGEPYTLHTNVYTQGKGDKEQQFKLWFDPTANFHTYTILWNPQRIIFTVDGTPIREFKNMESLGTLFPKNKPMRMYSSLWNADDWATRGGLVKTDWSKAPFTASYRGFQQEACVWSNGKSSCPNASKQGTTTGSWLSQELDSTAQQRMRWVQRNYMIYNYCTDAKRFPQGLPKEC 281          
BLAST of CF836132 vs. ExPASy Swiss-Prot
Match: XTH24_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana GN=XTH24 PE=1 SV=2)

HSP 1 Score: 273.092 bits (697), Expect = 1.043e-72
Identity = 121/173 (69.94%), Postives = 142/173 (82.08%), Query Frame = -1
Query:  196 GNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWXXXXXXXXXXXXNPWFSQELDATGQERLKWVQKNYMIYNYCKDSKRFPQGLPKEC 714
            GN+SGDPYTLHTNV+T GKGD+EQQFHLWFDPTA+FHTYS+LWNPQRI+  VD +PIREFKN ES GVLFPKN+PMR+Y+SLWNADDWATRGGL+KTDW++APF ASYRN   ++               + W++QE+D+T Q RLKWVQKNYMIYNYC D +RFPQG PKEC
Sbjct:  105 GNMSGDPYTLHTNVYTQGKGDKEQQFHLWFDPTANFHTYSILWNPQRIILTVDDTPIREFKNYESLGVLFPKNKPMRMYASLWNADDWATRGGLVKTDWSKAPFMASYRNIKIDS------------KPNSNWYTQEMDSTSQARLKWVQKNYMIYNYCTDHRRFPQGAPKEC 265          
BLAST of CF836132 vs. ExPASy Swiss-Prot
Match: XTH25_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 SV=2)

HSP 1 Score: 270.011 bits (689), Expect = 8.829e-72
Identity = 120/173 (69.36%), Postives = 139/173 (80.35%), Query Frame = -1
Query:  196 GNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWXXXXXXXXXXXXNPWFSQELDATGQERLKWVQKNYMIYNYCKDSKRFPQGLPKEC 714
            GNL+GDPYT+HTNV+T GKGDREQQFHLWFDPTADFHTYSVLWNP  IVF VD  P+REFKNL+  G+ +PK QPMR+YSSLWNAD WATRGGL+KTDW++APFTASYRNF A+ACV               WFSQ LD T +++++ VQ+ YMIYNYC D+KRFPQG PKEC
Sbjct:  111 GNLTGDPYTMHTNVYTQGKGDREQQFHLWFDPTADFHTYSVLWNPHHIVFMVDDIPVREFKNLQHMGIQYPKLQPMRLYSSLWNADQWATRGGLVKTDWSKAPFTASYRNFRADACV-SSGGRSSCPAGSPRWFSQRLDLTAEDKMRVVQRKYMIYNYCTDTKRFPQGFPKEC 282          
BLAST of CF836132 vs. ExPASy Swiss-Prot
Match: XTH20_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 20 OS=Arabidopsis thaliana GN=XTH20 PE=2 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 3.140e-69
Identity = 112/174 (64.37%), Postives = 136/174 (78.16%), Query Frame = -1
Query:  193 GNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWXXXXXXXXXXXXNPWFSQELDATGQERLKWVQKNYMIYNYCKDSKRFPQGLPKECA 714
            GN+SG PYTLHTNV+T G GD+EQQFHLWFDPT DFHTY ++WNPQR++F +DG PIREFKN E+ GV FPK+QPMR+Y+SLW A+ WATRGGL KTDW++APFTA YRN+N +ACVW            + WF+Q LD  G+ R+KW Q+ YM+YNYC D KRFPQG P EC+
Sbjct:  111 GNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTVDFHTYCIIWNPQRVIFTIDGIPIREFKNSEALGVPFPKHQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVDACVW--SNGKSSCSANSSWFTQVLDFKGKNRVKWAQRKYMVYNYCTDKKRFPQGAPPECS 282          
BLAST of CF836132 vs. ExPASy Swiss-Prot
Match: XTH19_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 19 OS=Arabidopsis thaliana GN=XTH19 PE=2 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 1.010e-67
Identity = 112/174 (64.37%), Postives = 133/174 (76.44%), Query Frame = -1
Query:  193 GNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWXXXXXXXXXXXXNPWFSQELDATGQERLKWVQKNYMIYNYCKDSKRFPQGLPKECA 714
            GN+SG PYTLHTNV+T G GD+EQQFHLWFDPTA+FHTY + WNPQRI+F VDG PIREF N ES GV FP  QPMR+Y+SLW A+ WATRGGL KTDW++APFTA YRN+N   CVW            + WF+Q+LD+ GQ R+K VQ  YM+YNYC D KRFP+G+P EC+
Sbjct:  106 GNISGHPYTLHTNVYTKGSGDKEQQFHLWFDPTANFHTYCITWNPQRIIFTVDGIPIREFMNAESRGVPFPTKQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAYYRNYNVEGCVW--VNGKSVCPANSQWFTQKLDSNGQTRMKGVQSKYMVYNYCSDKKRFPRGVPPECS 277          
BLAST of CF836132 vs. ExPASy Swiss-Prot
Match: XTH17_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 17 OS=Arabidopsis thaliana GN=XTH17 PE=2 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.723e-67
Identity = 112/173 (64.74%), Postives = 134/173 (77.46%), Query Frame = -1
Query:  196 GNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWXXXXXXXXXXXXNPWFSQELDATGQERLKWVQKNYMIYNYCKDSKRFPQGLPKEC 714
            GN+SG PYTLHTNV+T G GD+EQQFHLWFDPT +FHTY + WNPQRI+F VDG PIREFKN E+ GV FP  QPMR+Y+SLW A+ WATRGGL KTDW++APFTA YRN+N + CVW            +PWF+Q+LD+ GQ R+K VQ  YMIYNYC D +RFP+G+P EC
Sbjct:  111 GNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKNPEAIGVPFPTRQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVDGCVW--ANGKSSCSANSPWFTQKLDSNGQTRMKGVQSKYMIYNYCTDKRRFPRGVPAEC 281          
BLAST of CF836132 vs. ExPASy Swiss-Prot
Match: XTH18_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 18 OS=Arabidopsis thaliana GN=XTH18 PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 2.250e-67
Identity = 112/174 (64.37%), Postives = 133/174 (76.44%), Query Frame = -1
Query:  193 GNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWXXXXXXXXXXXXNPWFSQELDATGQERLKWVQKNYMIYNYCKDSKRFPQGLPKECA 714
            GNLSG PYTLHTNV+T G GD+EQQFHLWFDPT +FHTY + WNPQRI+F VDG PIREFKN ES GV FP  QPMR+Y+SLW A+ WATRGGL KTDW++APFTA YRN+N   CVW            + WF+Q+LD+ GQ R+K VQ  YM+YNYC D +RFP+G+P EC+
Sbjct:  111 GNLSGHPYTLHTNVYTKGSGDKEQQFHLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKNSESIGVPFPTKQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVW--ANGKSSCPANSSWFTQQLDSNGQTRMKGVQSKYMVYNYCNDKRRFPRGVPVECS 282          
BLAST of CF836132 vs. ExPASy Swiss-Prot
Match: XTH21_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana GN=XTH21 PE=2 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 2.939e-67
Identity = 115/188 (61.17%), Postives = 139/188 (73.94%), Query Frame = -1
Query:  196 GNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNA-NACVWXXXXXXXXXXXXNP-------------WFSQE-LDATGQERLKWVQKNYMIYNYCKDSKRFPQGLPKEC 714
            GN+SGDPY +HTNV+T GKGDREQQF+LWFDPTA FH YS+LWNP  IVFY+DG PIREFKNLE  GV +PKNQPMR+Y SLWNADDWATRGGL+KT+W+Q PF AS+ N+N+ NACVW            +P             WFSQ  +D++ ++ L+WVQ+ +M+YNYCKD KRF  GLP EC
Sbjct:  109 GNVSGDPYIVHTNVYTQGKGDREQQFYLWFDPTAAFHNYSILWNPSHIVFYIDGKPIREFKNLEVLGVAYPKNQPMRMYGSLWNADDWATRGGLVKTNWSQGPFVASFMNYNSENACVWSIVNGTTTTSPCSPGDSTSSSSSSTSEWFSQRGMDSSSKKVLRWVQRKFMVYNYCKDKKRFSNGLPVEC 296          
BLAST of CF836132 vs. ExPASy Swiss-Prot
Match: BRU1_SOYBN (Brassinosteroid-regulated protein BRU1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.235e-65
Identity = 115/173 (66.47%), Postives = 131/173 (75.72%), Query Frame = -1
Query:  196 GNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYRNFNANACVWXXXXXXXXXXXXNPWFSQELDATGQERLKWVQKNYMIYNYCKDSKRFPQGLPKEC 714
            GNLSGDPY LHTN+FT GKG+REQQF+LWFDPT +FHTYS++W PQ I+F VD +PIR FKN E  GV FPKNQPMRIYSSLWNADDWATRGGL+KTDW++APFTA YRNF A                   + + ELDA  + RL+WVQK +MIYNYC D KRFPQGLP EC
Sbjct:  113 GNLSGDPYILHTNIFTQGKGNREQQFYLWFDPTRNFHTYSIIWKPQHIIFLVDNTPIRVFKNAEPLGVPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNFKA----IEFSSKSSISNSGAEYEANELDAYSRRRLRWVQKYFMIYNYCSDLKRFPQGLPAEC 281          
The following BLAST results are available for this feature:
BLAST of CF836132 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
XTH23_ARATH3.701e-7873.45Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH22_ARATH1.555e-7670.79Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH24_ARATH1.043e-7269.94Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH25_ARATH8.829e-7269.36Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH20_ARATH3.140e-6964.37Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH19_ARATH1.010e-6764.37Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH17_ARATH1.723e-6764.74Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH18_ARATH2.250e-6764.37Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH21_ARATH2.939e-6761.17Probable xyloglucan endotransglucosylase/hydrolase... [more]
BRU1_SOYBN1.235e-6566.47Brassinosteroid-regulated protein BRU1 OS=Glycine ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02H14_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02H14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836132 ID=CF836132; Name=CF836132; organism=Citrus sinensis; type=EST; length=714bp
TTTTTTTTTTTTTTTTTACAAAGTAACAATATTTTATTACACGTCCTTCT
TATAGTACAAAAAAGAATGAACCATACATTTTATTTGTCACTAAACATTA
GTGCACAGAATAAAAGAACCAAAACATCAAAACTGAAGATTAAAAAAGCT
ATAAACAAAGACATATGGCAAATGGATCAGTTATATATTGAATGCACATT
CTTTTGGGAGCCCTTGGGGAAATCGTTTTGAGTCCTTGCAATAATTATAT
ATCATGTAATTCTTCTGCACCCATTTGAGTCTCTCTTGGCCAGTGGCATC
AAGTTCTTGCGAGAACCATGGATTATTATTTTTTGAGTTGCAAGAGGATT
TTCCATTAGACCAGACGCAAGCATTGGCATTGAAGTTTCTGTAAGAAGCA
GTGAAGGGAGCTTGGGTCCAGTCAGTTTTGATAAGGCCACCTCTCGTGGC
CCAGTCATCGGCGTTCCAGAGACTCGAGTAAATCCTCATCGGCTGGTTTT
TGGGAAAGAGTACGCCGTTTGATTCCAAGTTCTTGAACTCTCTAATTGGC
GAGCCATCAACATAGAAGACAATACGTTGGGGATTCCAGAGAACGGAATA
GGTGTGAAAGTCAGCAGTGGGGTCAAACCAGAGGTGGAATTGTTGCTCTC
TGTCACCTTTGCCATTTGTGAACACATTAGTATGAAGAGTATAAGGATCA
CCACTTAAATTCCC
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