CF836145

Overview
NameCF836145
Unique NameCF836145
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length632
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER15_IPOBA (Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 1.798e-59
Identity = 117/180 (65.00%), Postives = 141/180 (78.33%), Query Frame = 2
Query:   92 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTF 631
            S S AQL+  FY+TTCPN S I+  V+Q A  +D RI  SLIRLHFHDCFV+GCDGS+LLDN  N T+I SEK ++ N NS RGF+VVD +K A+E+ACPG+VSC DILA+ASE SV+L+GGPSW V LGRRD RTAN+  A+ +LP+PF+ L  L  +FTNVGLN N DLVALSGAHTF
Sbjct:   19 SHSNAQLSSTFYSTTCPNVSAIVRTVVQQALQNDARIGGSLIRLHFHDCFVDGCDGSLLLDN--NGTTIVSEKDALPNTNSTRGFDVVDNIKTAVENACPGVVSCVDILALASESSVSLAGGPSWNVLLGRRDRRTANQGGANTSLPSPFENLTNLTQKFTNVGLNVN-DLVALSGAHTF 195          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER1A_ARMRU (Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2)

HSP 1 Score: 226.483 bits (576), Expect = 8.922e-59
Identity = 115/180 (63.89%), Postives = 132/180 (73.33%), Query Frame = 2
Query:   92 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTF 631
            S S AQLTP FY+ +CPN SNI+   + N   SD RI AS++RLHFHDCFVNGCD SILLDN    TS  +EK +  N NSARGF V+D MKAA+ESACP  VSCAD+L IA++QSV L+GGPSW VPLGRRD   A   LA+ NLP PF TL  LK  F NVGLN ++DLVALSG HTF
Sbjct:   26 SLSDAQLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNT---TSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTF 202          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER1B_ARMRU (Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 4.428e-58
Identity = 114/180 (63.33%), Postives = 133/180 (73.89%), Query Frame = 2
Query:   92 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTF 631
            S S AQLTP FY+T+CPN SNI+  ++ N   SD RITAS++RLHFHDCFVNGCD SILLDN    TS  +EK ++ N NSARGF  VD +KAA+E ACP  VSCAD+L IA++QSVNL+GGPSW VPLGRRD   A   LA+ NLP PF TL  LK  F  VGL+  +DLVALSG HTF
Sbjct:   24 SLSDAQLTPTFYDTSCPNVSNIVRDIIINELRSDPRITASILRLHFHDCFVNGCDASILLDNT---TSFLTEKDALGNANSARGFPTVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDAFAKVGLDRPSDLVALSGGHTF 200          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 7.553e-58
Identity = 114/180 (63.33%), Postives = 131/180 (72.78%), Query Frame = 2
Query:   92 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTF 631
            S S AQLTP FY+ +CPN SNI+  ++ N   SD  I AS++RLHFHDCFVNGCD SILLDN    TS  +EK +  N NSARGF VVD +KAA+E ACP  VSCAD+L IA++QSVNL+GGPSW VPLGRRD R A   LA+ NLP P  TL  LK  F NVGLN  +DLVALSG HTF
Sbjct:    5 SFSNAQLTPTFYDNSCPNVSNIVRDIIINELRSDPSIAASILRLHFHDCFVNGCDASILLDNT---TSFRTEKDAFGNANSARGFPVVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSRQAFLDLANANLPAPSFTLPELKAAFANVGLNRPSDLVALSGGHTF 181          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 2.870e-57
Identity = 114/179 (63.69%), Postives = 138/179 (77.09%), Query Frame = 2
Query:   95 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTF 631
            +S AQL   FY+ TCPNAS I+   +Q A  SD RI  SLIRLHFHDCFVNGCDGS+LLD+ +   SI SEK + AN NS RGF VVD++K ALE+ACPGIVSC+DILA+ASE SV+L+GGPSWTV LGRRDG TAN S A+ +LP+PF+ L+ +  +F  VGL   TD+V+LSGAHTF
Sbjct:   28 TSSAQLNATFYSGTCPNASAIVRSTIQQALQSDARIGGSLIRLHFHDCFVNGCDGSLLLDDTS---SIQSEKNAPANANSTRGFNVVDSIKTALENACPGIVSCSDILALASEASVSLAGGPSWTVLLGRRDGLTANLSGANSSLPSPFEGLNNITSKFVAVGLK-TTDVVSLSGAHTF 202          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER33_ARATH (Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=1 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 3.748e-57
Identity = 112/180 (62.22%), Postives = 131/180 (72.78%), Query Frame = 2
Query:   92 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTF 631
            S S AQLTP FY+T+CP  +NI+   + N   SD RI  S++RLHFHDCFVNGCD SILLDN    TS  +EK ++ N NSARGF V+D MKAA+E ACP  VSCAD+L IA++QSV L+GGPSW VPLGRRD   A   LA+ NLP PF TL  LK  F NVGL+  +DLVALSGAHTF
Sbjct:   27 SFSDAQLTPTFYDTSCPTVTNIVRDTIVNELRSDPRIAGSILRLHFHDCFVNGCDASILLDNT---TSFRTEKDALGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGGPSWKVPLGRRDSLQAFLDLANANLPAPFFTLPQLKANFKNVGLDRPSDLVALSGAHTF 203          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER34_ARATH (Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=1 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.424e-56
Identity = 112/180 (62.22%), Postives = 130/180 (72.22%), Query Frame = 2
Query:   92 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTF 631
            S S AQLTP FY+ +CPN +NI+   + N   SD RI AS++RLHFHDCFVNGCD SILLDN    TS  +EK +  N NSARGF V+D MKAA+E ACP  VSCAD+L IA++QSV L+GGPSW VPLGRRD   A   LA+ NLP PF TL  LK  F NVGL+  +DLVALSG HTF
Sbjct:   26 SLSAAQLTPTFYDRSCPNVTNIVRETIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNT---TSFRTEKDAFGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLELANANLPAPFFTLPQLKASFRNVGLDRPSDLVALSGGHTF 202          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER32_ARATH (Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=1 SV=3)

HSP 1 Score: 218.779 bits (556), Expect = 1.860e-56
Identity = 112/180 (62.22%), Postives = 131/180 (72.78%), Query Frame = 2
Query:   92 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTF 631
            S S AQLTP FY+ TCP+   I+   + N   SD RI AS++RLHFHDCFVNGCD SILLDN    TS  +EK +  N NSARGF V+D MKAA+E+ACP  VSCADIL IA++Q+VNL+GGPSW VPLGRRD   A  +LA+ NLP PF TL  LK  F NVGL+  +DLVALSG HTF
Sbjct:   25 SISSAQLTPTFYDNTCPSVFTIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNT---TSFRTEKDAAPNANSARGFPVIDRMKAAVETACPRTVSCADILTIAAQQAVNLAGGPSWRVPLGRRDSLQAFFALANTNLPAPFFTLPQLKASFQNVGLDRPSDLVALSGGHTF 201          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER53_ARATH (Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.206e-55
Identity = 112/179 (62.57%), Postives = 136/179 (75.98%), Query Frame = 2
Query:   95 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTF 631
            +S AQL   FY+ TCPNAS I+   +Q A  SD RI ASLIRLHFHDCFVNGCD SILLD+     SI SEK +  N NSARGF VVD +K ALE+ACPG+VSC+D+LA+ASE SV+L+GGPSWTV LGRRD  TAN + A+ ++P+P ++L  +  +F+ VGLN N DLVALSGAHTF
Sbjct:   27 TSSAQLNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTG---SIQSEKNAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVLLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTN-DLVALSGAHTF 201          
BLAST of CF836145 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.575e-55
Identity = 110/180 (61.11%), Postives = 130/180 (72.22%), Query Frame = 2
Query:   92 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTF 631
            S S AQL+P FY+ TCP   +I    + NA  SD RI AS++RLHFHDCFVNGCD SILLDN    TS  +EK +  N NSARGF+V+D MKAA+E ACP  VSCAD+LAIA+++SV L+GGPSW VP GRRD       LA+ NLP PF TL+ LK RF NVGL+  +DLVALSG HTF
Sbjct:   18 SLSHAQLSPSFYDKTCPQVFDIATTTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNT---TSFRTEKDAFGNANSARGFDVIDKMKAAVEKACPKTVSCADLLAIAAQESVVLAGGPSWRVPNGRRDSLRGFMDLANDNLPAPFFTLNQLKDRFKNVGLDRASDLVALSGGHTF 194          
The following BLAST results are available for this feature:
BLAST of CF836145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER15_IPOBA1.798e-5965.00Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1[more]
PER1A_ARMRU8.922e-5963.89Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE... [more]
PER1B_ARMRU4.428e-5863.33Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE... [more]
PER1C_ARMRU7.553e-5863.33Peroxidase C1C (Fragment) OS=Armoracia rusticana G... [more]
PER54_ARATH2.870e-5763.69Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]
PER33_ARATH3.748e-5762.22Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=... [more]
PER34_ARATH1.424e-5662.22Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=... [more]
PER32_ARATH1.860e-5662.22Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=... [more]
PER53_ARATH1.206e-5562.57Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=... [more]
PER37_ARATH1.575e-5561.11Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02H20_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02H20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836145 ID=CF836145; Name=CF836145; organism=Citrus sinensis; type=EST; length=632bp
CAACACTCACTACATTTCTCTTCAAAGGAAAATGTCTCCTCTTCGTTATC
TTCTTGCAGCAGCTGTCCTTTTCGCGTTTGTGCTTGACGAATCATCATCT
CAAGCTCAGCTTACGCCAGATTTTTACAACACCACATGCCCTAATGCATC
AAACATCATTCTGGGTGTTCTTCAGAATGCTTTCAATTCCGATATCCGAA
TCACTGCCAGCCTCATCAGGCTTCATTTTCATGACTGCTTTGTCAACGGC
TGTGATGGGTCAATCTTGCTGGACAACGTTGCCAATGATACGAGCATAGA
CAGCGAGAAATTTTCGATGGCAAATAATAATTCAGCAAGAGGTTTCGAAG
TTGTTGATGCCATGAAAGCAGCCCTTGAGAGTGCCTGTCCTGGCATTGTT
TCCTGTGCTGATATTCTTGCCATTGCTTCTGAACAATCCGTCAATTTGTC
AGGTGGTCCTTCATGGACAGTTCCACTGGGAAGAAGAGACGGCAGGACAG
CGAACAGGAGCCTTGCAGATCAGAATCTTCCAACACCATTTCAGACTCTT
GATTTGCTCAAAGGCAGATTTACAAATGTCGGTCTCAACGACAATACTGA
TCTGGTTGCACTCTCCGGCGCTCACACTTTTG
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