CF836165

Overview
NameCF836165
Unique NameCF836165
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length650
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF836165 vs. ExPASy Swiss-Prot
Match: FK125_ARATH (F-box/kelch-repeat protein OR23 OS=Arabidopsis thaliana GN=OR23 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.145e-30
Identity = 59/110 (53.64%), Postives = 82/110 (74.55%), Query Frame = 3 
Query:   24 GRPDVFMLDKFDILRYDMGLNRWLKETTIPEIRPCKKPLGFIVLDGELYVMTVLKGSDLNETRRSQQHKRAGCLFIQIYHPRKKTWRYIFTKPPFPQPLDFGTAIMCTVR 353
            G+P  FMLDK  ILRY+MGLNRW KE+++P+     KP+GF+ L+GEL+VM +L G +L +TR ++Q ++AG L I +Y P+KKTWR + +KPPF   LDF T +MCT+R
Sbjct:  332 GKPVFFMLDKDWILRYEMGLNRWRKESSVPKKAHYDKPVGFVALNGELHVMILLDGYNLMDTRHTRQQRKAGSLMIHMYDPKKKTWRSVVSKPPFNHQLDFRTTVMCTIR 441
The following BLAST results are available for this feature:
BLAST of CF836165 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FK125_ARATH4.145e-3053.64F-box/kelch-repeat protein OR23 OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS03_02I10_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02I10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836165 ID=CF836165; Name=CF836165; organism=Citrus sinensis; type=EST; length=650bp
TCGTAATGGAACATTAAAATCGGGGAAGGCCTGACGTTTTTATGCTTGAC
AAATTTGATATCTTGAGGTACGACATGGGTTTAAACCGATGGTTAAAGGA
GACTACTATACCAGAAATACGTCCTTGCAAGAAACCACTGGGTTTTATTG
TGTTAGATGGGGAGTTATATGTAATGACTGTTTTGAAAGGATCGGATCTA
AATGAAACTCGGCGATCACAGCAGCATAAAAGGGCAGGATGTCTATTCAT
CCAAATCTACCATCCCAGAAAGAAGACATGGAGATATATATTTACAAAGC
CACCATTTCCTCAGCCATTGGATTTTGGTACTGCAATTATGTGCACCGTT
AGGCTTTAGTCTTCTTCTCTTCTGTTTTAGTTGTGTTTTTCTGTAGCTAA
TTAGTAGAGCATACCAATCATATGCAATACATCTGGTTCATTGGGGTTAG
CAGATTAGCTAGCCGGTGTACAGATTAGATTAAAGGATACAGGTATGTCA
CTGTTGAAATCTCATGAGTATGAGTCTCAGACTGTCAGTTGCGGGTGATT
GGGCGTGAGTGCTGTATATTGTATCTGATTTTACCCCAAGAGTCCCCAGA
CCAAGTGAATAAATATGTACGTACTTATCATTATAAAAAAAAAAAAAAAA
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