CF836189

Overview
NameCF836189
Unique NameCF836189
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836189 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 298.13 bits (762), Expect = 2.869e-80
Identity = 147/217 (67.74%), Postives = 177/217 (81.57%), Query Frame = 1
Query:   40 SQTVASSGSTNSGATENSHVIESGNLVISVQVLRKVTQNFAQENELGRGGFGTVYKGELEDGTKIAVKRMEAGVTTTKALDEFQSEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPHGALSRHLFQWEKLQLKPLSWTRRLSIALDVARGMEYLHCLARQTFIHRDLKSSNILLDDDFRAKVSDFGLVKLAPDGEKSVVTRLAGTFGYLAPEYA 690
            S T    G++  G  +N  ++E+GN++IS+QVLR VT NF+ +N LG GGFG VYKGEL DGTKIAVKRME GV   K   EF+SEIAVL+KVRHRHLV+LLGY ++GNE+LLVYEYMP G LSRHLF+W +  LKPL W +RL++ALDVARG+EYLH LA Q+FIHRDLK SNILL DD RAKV+DFGLV+LAP+G+ S+ TR+AGTFGYLAPEYA
Sbjct:  551 SDTYTLPGTSEVG--DNIQMVEAGNMLISIQVLRSVTNNFSSDNILGSGGFGVVYKGELHDGTKIAVKRMENGVIAGKGFAEFKSEIAVLTKVRHRHLVTLLGYCLDGNEKLLVYEYMPQGTLSRHLFEWSEEGLKPLLWKQRLTLALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYA 765          
BLAST of CF836189 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 9.951e-49
Identity = 98/191 (51.31%), Postives = 135/191 (70.68%), Query Frame = 1
Query:  124 SVQVLRKVTQNFAQENELGRGGFGTVYKGELEDG-TKIAVKRMEAGVTTTKALDEFQSEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPHGALSRHLFQWEKLQLKPLSWTRRLSIALDVARGMEYLHCLARQTFIHRDLKSSNILLDDDFRAKVSDFGLVKLAPD--GEKSVVTRLAGTFGYLAPEY 687
            S+  ++  T +F ++  +G GGFG+VYKG ++ G T +AVKR+E  +T+ +   EF +E+ +LSK+RH HLVSL+GY  + NE +LVYEYMPHG L  HLF+ +K    PLSW RRL I +  ARG++YLH  A+ T IHRD+K++NILLD++F AKVSDFGL ++ P    +  V T + GTFGYL PEY
Sbjct:  514 SIYEIKSATNDFEEKLIIGVGGFGSVYKGRIDGGATLVAVKRLE--ITSNQGAKEFDTELEMLSKLRHVHLVSLIGYCDDDNEMVLVYEYMPHGTLKDHLFRRDKASDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVAKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEY 702          
BLAST of CF836189 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.300e-48
Identity = 98/191 (51.31%), Postives = 135/191 (70.68%), Query Frame = 1
Query:  124 SVQVLRKVTQNFAQENELGRGGFGTVYKGELEDG-TKIAVKRMEAGVTTTKALDEFQSEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPHGALSRHLFQWEKLQLKPLSWTRRLSIALDVARGMEYLHCLARQTFIHRDLKSSNILLDDDFRAKVSDFGLVKLAPD--GEKSVVTRLAGTFGYLAPEY 687
            S+  ++  T +F  +  +G GGFG+VYKG+++ G T +AVKR+E  +T+ +   EF++E+ +LSK+RH HLVSL+GY  E NE +LVYEYMPHG L  HLF+ +K    PLSW RRL I +  ARG++YLH  A+ T IHRD+K++NILLD++F  KVSDFGL ++ P    +  V T + GTFGYL PEY
Sbjct:  507 SIFEIKSATNDFEDKLIIGVGGFGSVYKGQIDGGATLVAVKRLE--ITSNQGAKEFETELEMLSKLRHVHLVSLIGYCDEDNEMVLVYEYMPHGTLKDHLFRRDKTSDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVTKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEY 695          
BLAST of CF836189 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 5.460e-47
Identity = 105/219 (47.95%), Postives = 144/219 (65.75%), Query Frame = 1
Query:   40 SQTVASSGSTNSGATENSHVIESGNL--VISVQVLRKVTQNFAQENELGRGGFGTVYKGELEDGTKIAVKRMEAGVTTTKALDEFQSEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPHGALSRHLFQWEKLQLKPLSWTRRLSIALDVARGMEYLHCLARQTFIHRDLKSSNILLDDDFRAKVSDFGLVKLAPDGEKS-VVTRLAGTFGYLAPEY 687
            SQT+  S +++  AT +   + S +L      Q +   T  F + + LG GGFG VYKG LEDGTK+AVKR      + + + EF++EI +LSK+RHRHLVSL+GY  E +E +LVYEYM +G L  HL+  +   L PLSW +RL I +  ARG+ YLH  A Q+ IHRD+K++NILLD++  AKV+DFGL K  P  +++ V T + G+FGYL PEY
Sbjct:  469 SQTLTKSTASHKSATASCISLASTHLGRCFMFQEIMDATNKFDESSLLGVGGFGRVYKGTLEDGTKVAVKR--GNPRSEQGMAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGAD---LPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDENLVAKVADFGLSKTGPSLDQTHVSTAVKGSFGYLDPEY 682          
BLAST of CF836189 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 9.314e-47
Identity = 100/212 (47.17%), Postives = 136/212 (64.15%), Query Frame = 1
Query:   55 SSGSTNSGATENSHVIESGNLVISVQVLRKVTQNFAQENELGRGGFGTVYKGELEDGTKIAVKRMEAGVTTTKALDEFQSEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPHGALSRHLFQWEKLQLKPLSWTRRLSIALDVARGMEYLHCLARQTFIHRDLKSSNILLDDDFRAKVSDFGLVKLAPDGEKS-VVTRLAGTFGYLAPEY 687
            S GS  S  T  + +  + N  I    ++  T NF +   +G GGFG VYKGEL DGTK+AVKR      + + L EF++EI +LS+ RHRHLVSL+GY  E NE +L+YEYM +G +  HL+      L  L+W +RL I +  ARG+ YLH    +  IHRD+KS+NILLD++F AKV+DFGL K  P+ +++ V T + G+FGYL PEY
Sbjct:  451 SMGSKYSNGTTLTSITTNANYRIPFAAVKDATNNFDESRNIGVGGFGKVYKGELNDGTKVAVKR--GNPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILIYEYMENGTVKSHLYG---SGLPSLTWKQRLEICIGAARGLHYLHTGDSKPVIHRDVKSANILLDENFMAKVADFGLSKTGPELDQTHVSTAVKGSFGYLDPEY 657          
BLAST of CF836189 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.037e-46
Identity = 101/215 (46.98%), Postives = 143/215 (66.51%), Query Frame = 1
Query:   49 VASSGSTNSG-ATENSHVIESGNLVISVQVLRKVTQNFAQENELGRGGFGTVYKGELEDGTKIAVKRMEAGVTTTKALDEFQSEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPHGALSRHLFQWEKLQLKPLSWTRRLSIALDVARGMEYLHCLARQTFIHRDLKSSNILLDDDFRAKVSDFGLVKLAPDGEKS-VVTRLAGTFGYLAPEY 687
            ++S+G+T+S   T  + +  + +  I +  +++ T +F +   +G GGFG VYKGEL DGTK+AVKR  A   + + L EF++EI +LS+ RHRHLVSL+GY  E NE +LVYEYM +G L  HL+    L L   SW +RL I +  ARG+ YLH    +  IHRD+KS+NILLD++  AKV+DFGL K  P+ +++ V T + G+FGYL PEY
Sbjct:  445 LSSNGTTSSSNGTTLASIASNSSYRIPLVAVKEATNSFDENRAIGVGGFGKVYKGELHDGTKVAVKR--ANPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILVYEYMENGTLKSHLYGSGLLSL---SWKQRLEICIGSARGLHYLHTGDAKPVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEY 654          
BLAST of CF836189 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.345e-45
Identity = 96/199 (48.24%), Postives = 133/199 (66.83%), Query Frame = 1
Query:  106 SGNLVISVQVLRKVTQNFAQENELGRGGFGTVYKGELEDGTKIAVKRMEAGVTTTKALDEFQSEIAVLSKVRHRHLVSLLGYSI----EGNERLLVYEYMPHGALSRHLFQWEKLQLKPLSWTRRLSIALDVARGMEYLHCLARQTFIHRDLKSSNILLDDDFRAKVSDFGLVKLAPDGEKSVVTRLAGTFGYLAPEYA 690
            +G++   ++ L K T NF+Q+N +GRGGFG VYKG L DG+ IAVK++        A  EF++E+ ++S ++HR+LV L G S+      ++R LVY+YM +G L  HLF   +    PLSW +R SI LDVA+G+ YLH   +    HRD+K +NILLD D RA+V+DFGL K + +GE  + TR+AGT GYLAPEYA
Sbjct:  278 TGSIWFKIEELEKATNNFSQKNFIGRGGFGFVYKGVLPDGSVIAVKKVIESEFQGDA--EFRNEVEIISNLKHRNLVPLRGCSMVDDDSESQRYLVYDYMSNGNLDDHLFPRGETTKMPLSWPQRKSIILDVAKGLAYLHYGVKPAIYHRDIKGTNILLDVDMRARVADFGLAKQSREGESHLTTRVAGTHGYLAPEYA 474          
BLAST of CF836189 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.756e-45
Identity = 106/212 (50.00%), Postives = 137/212 (64.62%), Query Frame = 1
Query:   61 GSTNSGATENSHVIESG--NLVISVQVLRKVTQNFAQENELGRGGFGTVYKGELEDGTKIAVKRMEAGVTTTKALDEFQSEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPHGALSRHLFQWEKLQLKPLSWTRRLSIALDVARGMEYLHCLARQTFIHRDLKSSNILLDDDFRAKVSDFGLVKLAP-DGEKSVVTRLAGTFGYLAPEY 687
            GS+NS  TE + V  SG   L IS   L+  T NF +   +G GGFG V++G L+D TK+AVKR   G  + + L EF SEI +LSK+RHRHLVSL+GY  E +E +LVYEYM  G L  HL+        PLSW +RL + +  ARG+ YLH  + Q  IHRD+KS+NILLD+++ AKV+DFGL +  P   E  V T + G+FGYL PEY
Sbjct:  456 GSSNSRTTERT-VSSSGYHTLRISFAELQSGTNNFDRSLVIGVGGFGMVFRGSLKDNTKVAVKRGSPG--SRQGLPEFLSEITILSKIRHRHLVSLVGYCEEQSEMILVYEYMDKGPLKSHLYGSTN---PPLSWKQRLEVCIGAARGLHYLHTGSSQGIIHRDIKSTNILLDNNYVAKVADFGLSRSGPCIDETHVSTGVKGSFGYLDPEY 661          
BLAST of CF836189 vs. ExPASy Swiss-Prot
Match: ANX1_ARATH (Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana GN=ANX1 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.294e-45
Identity = 104/224 (46.43%), Postives = 145/224 (64.73%), Query Frame = 1
Query:   40 SQTVASSGSTNSGATEN-SHVIESGNLV------ISVQVLRKVTQNFAQENELGRGGFGTVYKGELEDGTKIAVKRMEAGVTTTKALDEFQSEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPHGALSRHLFQWEKLQLKPLSWTRRLSIALDVARGMEYLHCLARQTFIHRDLKSSNILLDDDFRAKVSDFGLVKLAPD-GEKSVVTRLAGTFGYLAPEY 687
            + T + + ST SG + N SH+    NL        S+  ++  TQNF   N +G GGFG VYKG ++  TK+AVK+  +   + + L+EF++EI +LS++RH+HLVSL+GY  EG E  LVY+YM  G L  HL+  +K QL   +W RRL IA+  ARG+ YLH  A+ T IHRD+K++NIL+D+++ AKVSDFGL K  P+     V T + G+FGYL PEY
Sbjct:  474 NSTTSGTKSTISGKSNNGSHL---SNLAAGLCRRFSLPEIKHGTQNFDDSNVIGVGGFGKVYKGVIDGTTKVAVKK--SNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYCDEGGEMCLVYDYMAFGTLREHLYNTKKPQL---TWKRRLEIAIGAARGLHYLHTGAKYTIIHRDVKTTNILVDENWVAKVSDFGLSKTGPNMNGGHVTTVVKGSFGYLDPEY 689          
BLAST of CF836189 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.996e-45
Identity = 95/209 (45.45%), Postives = 138/209 (66.03%), Query Frame = 1
Query:   73 SGATENSHVIESGNLVISVQVLRKVTQNFAQENELGRGGFGTVYKGELEDGTKIAVKRMEAGVTTTKALDEFQSEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPHGALSRHLFQWEKLQLKPLSWTRRLSIALDVARGMEYLHCLARQTFIHRDLKSSNILLDDDFRAKVSDFGLVKLAPDGEKSV---VTRLAGTFGYLAPEYA 690
            SG+        + +L++  + L+  T NF+ ENELGRGGFG+VYKG    G +IAVKR+     + +  +EF++EI +L+K++HR+LV L+G+ I+G ERLLVYE++ + +L + +F  EK QL  L W  R  +   +ARG+ YLH  +R   IHRDLK+SNILLD +   K++DFGL KL   G+       +R+AGT+GY+APEYA
Sbjct:  329 SGSIAEDEFSNTESLLVHFETLKTATDNFSSENELGRGGFGSVYKGVFPQGQEIAVKRLSGN--SGQGDNEFKNEILLLAKLQHRNLVRLIGFCIQGEERLLVYEFIKNASLDQFIFDTEKRQL--LDWVVRYKMIGGIARGLLYLHEDSRFRIIHRDLKASNILLDQEMNPKIADFGLAKLFDSGQTMTHRFTSRIAGTYGYMAPEYA 533          
The following BLAST results are available for this feature:
BLAST of CF836189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TMK1_ARATH2.869e-8067.74Probable receptor protein kinase TMK1 OS=Arabidops... [more]
Y5389_ARATH9.951e-4951.31Probable receptor-like protein kinase At5g38990 OS... [more]
Y5900_ARATH1.300e-4851.31Putative receptor-like protein kinase At5g39000 OS... [more]
THE1_ARATH5.460e-4747.95Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
HERK_ARATH9.314e-4747.17Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]
Y5597_ARATH6.037e-4646.98Probable receptor-like protein kinase At5g59700 OS... [more]
Y1105_ARATH1.345e-4548.24Probable receptor-like protein kinase At1g11050 OS... [more]
Y5241_ARATH1.756e-4550.00Probable receptor-like protein kinase At5g24010 OS... [more]
ANX1_ARATH2.294e-4546.43Receptor-like protein kinase ANXUR1 OS=Arabidopsis... [more]
CRK29_ARATH2.996e-4545.45Cysteine-rich receptor-like protein kinase 29 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02J02_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02J02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836189 ID=CF836189; Name=CF836189; organism=Citrus sinensis; type=EST; length=691bp
TAAGATTGCTCCTTTAATGACACCGCAAGAAGTTTATCCAGTCAAACTGT
GGCTAGTTCTGGGAGTACTAATAGTGGGGCAACAGAGAACTCTCATGTGA
TTGAGTCGGGGAATCTGGTCATATCTGTTCAAGTTCTTCGTAAAGTTACT
CAAAATTTTGCACAGGAAAATGAGCTTGGCCGAGGTGGCTTTGGAACTGT
TTATAAGGGTGAACTGGAAGATGGAACAAAAATTGCAGTCAAGAGAATGG
AGGCTGGCGTGACAACCACCAAAGCACTGGATGAATTTCAATCTGAAATA
GCTGTTCTTTCTAAGGTCCGGCACAGACATCTGGTCTCTCTTTTGGGTTA
TTCTATTGAAGGCAATGAGAGGCTTCTGGTATATGAGTACATGCCTCATG
GTGCTCTAAGCAGACATCTTTTCCAATGGGAGAAGCTGCAGTTGAAGCCT
CTATCTTGGACGAGGAGGCTCAGCATTGCATTGGACGTTGCTAGAGGAAT
GGAGTATCTTCATTGTCTTGCTCGCCAGACCTTTATACATCGAGATCTCA
AATCTTCCAACATTCTTTTGGATGATGACTTTCGGGCAAAAGTTTCAGAT
TTTGGATTGGTGAAACTTGCTCCAGATGGCGAGAAGTCTGTCGTTACTAG
GCTTGCTGGGACATTTGGGTACCTTGCACCGGAATATGCTG
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