CF836217
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF836217 vs. ExPASy Swiss-Prot
Match: NDK3_ARATH (Nucleoside diphosphate kinase III, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=NDPK3 PE=1 SV=1) HSP 1 Score: 345.895 bits (886), Expect = 1.484e-94 Identity = 167/206 (81.07%), Postives = 189/206 (91.75%), Query Frame = -3 Query: 170 RAVSAAAAVTFSGKLLYLVSSFGRA-GSSTASRSWLSGAIAIPAAAYTLQEQEVHAAEMERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLVNYTSNAEKWVY 784 RA+ AAAAV+ SGK+ S+F R+ GS AS+SW++G +A+PAAAY +Q+QEV AAEMERTFIAIKPDGVQRGLISEIISRFERKGFKLV IK++VPSK+FAQKHYHDLKERPFFNGLC+FLSSGPVIAMVWEG+GVI YGRKLIGATDPQKSEPGTIRGDLAV VGRNIIHGSDGPETAKDEI LWFKP++LV+YTSN+EKW+Y Sbjct: 30 RAIGAAAAVSASGKIPLYASNFARSSGSGVASKSWITGLLALPAAAYMIQDQEVLAAEMERTFIAIKPDGVQRGLISEIISRFERKGFKLVGIKVIVPSKDFAQKHYHDLKERPFFNGLCDFLSSGPVIAMVWEGDGVIRYGRKLIGATDPQKSEPGTIRGDLAVTVGRNIIHGSDGPETAKDEISLWFKPQELVSYTSNSEKWLY 235
BLAST of CF836217 vs. ExPASy Swiss-Prot
Match: NDK4_ARATH (Nucleoside diphosphate kinase IV, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=NDK4 PE=1 SV=2) HSP 1 Score: 340.887 bits (873), Expect = 4.775e-93 Identity = 163/205 (79.51%), Postives = 184/205 (89.76%), Query Frame = -3 Query: 170 RAVSAAAAVTFSGKLLYLVSSFGRAGSSTASRSWLSGAIAIPAAAYTLQEQEVHAAEMERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLVNYTSNAEKWVY 784 RA+ AA+ V +GK+ S+FG++GS S SW++G +A+PAAA+ LQ+QE AAEMERTFIAIKPDGVQRGLISEII+RFERKG+KLV IK++VPSK FAQKHYHDLKERPFFNGLC FLSSGPV+AMVWEGEGVI YGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEI LWFKPE+LV+YTSNAEKW+Y Sbjct: 30 RAIGAASVVHATGKVPQYASNFGKSGSGFVSNSWITGLLALPAAAFMLQDQEALAAEMERTFIAIKPDGVQRGLISEIITRFERKGYKLVGIKVMVPSKGFAQKHYHDLKERPFFNGLCNFLSSGPVVAMVWEGEGVIRYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEISLWFKPEELVSYTSNAEKWIY 234
BLAST of CF836217 vs. ExPASy Swiss-Prot
Match: NDK4_SPIOL (Nucleoside diphosphate kinase 4, chloroplastic OS=Spinacia oleracea GN=NDK4 PE=1 SV=1) HSP 1 Score: 335.495 bits (859), Expect = 2.006e-91 Identity = 165/205 (80.49%), Postives = 181/205 (88.29%), Query Frame = -3 Query: 170 RAVSAAAAVTFSGKLLYLVSSFGRAGSSTASRSWLSGAIAIPAAAYTLQEQEVHAAEMERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLVNYTSNAEKWVY 784 R V+A AAV+ K YL S G + AS +W+S A+AIPAAAY LQ+QE AAE ERTFIAIKPDGVQRGLISEI++RFERKGFKLVAIK+V+PSK+FAQKHYHDL ERPFFNGLC+FLSSGPV+AMVWEGEGVI YGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPE+LVNYT NAEKW+Y Sbjct: 32 RTVAATAAVSLRVKAPYLASF----GGANASGTWMSTALAIPAAAYLLQDQEACAAEFERTFIAIKPDGVQRGLISEIVARFERKGFKLVAIKVVIPSKDFAQKHYHDLSERPFFNGLCDFLSSGPVVAMVWEGEGVIKYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEELVNYTHNAEKWIY 232
BLAST of CF836217 vs. ExPASy Swiss-Prot
Match: NDK3_SPIOL (Nucleoside diphosphate kinase 3 OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 268.085 bits (684), Expect = 3.934e-71 Identity = 127/150 (84.67%), Postives = 139/150 (92.67%), Query Frame = -3 Query: 170 AEMERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLVNYTSNAEKWVY 619 AE ERTFIAIKPDGVQRGLISEI++RFERKGF LVAIK+V+PS+ FAQKHY DLK++PF+ GL + SSGPV+AMVWEGEGVI YGRKLIGATDPQKSEPGTIRGDLAVV GRNIIHGSDGPETAKDEIKLWFKPE+LVNYT NAEKW+Y Sbjct: 1 AEFERTFIAIKPDGVQRGLISEIVARFERKGFSLVAIKVVIPSRPFAQKHYADLKDKPFYVGLVAYWSSGPVVAMVWEGEGVIKYGRKLIGATDPQKSEPGTIRGDLAVVNGRNIIHGSDGPETAKDEIKLWFKPEELVNYTHNAEKWIY 150
BLAST of CF836217 vs. ExPASy Swiss-Prot
Match: NDK_PROMA (Nucleoside diphosphate kinase OS=Prochlorococcus marinus GN=ndk PE=3 SV=2) HSP 1 Score: 209.534 bits (532), Expect = 1.660e-53 Identity = 98/149 (65.77%), Postives = 119/149 (79.87%), Query Frame = -3 Query: 167 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLVNYTSNAEKWVYE 613 +ERTF+AIKPDGVQRGL+ EI+ RFERKGFKLV +K ++PSKE A+KHY KERPFF GL F++SGPV+AMVWEG+GVI RKLIGAT P ++EPGTIRGDL + +GRN+IHGSDGPETA EI LWF +L N+ + +KW E Sbjct: 3 VERTFLAIKPDGVQRGLVGEILGRFERKGFKLVGLKQLIPSKELAEKHYGVHKERPFFTGLVGFITSGPVVAMVWEGDGVILSARKLIGATKPLEAEPGTIRGDLGINIGRNVIHGSDGPETASFEIDLWFNSSELNNWNPSDQKWRVE 151
BLAST of CF836217 vs. ExPASy Swiss-Prot
Match: NDK_PROM3 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9303) GN=ndk PE=3 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.660e-53 Identity = 98/150 (65.33%), Postives = 122/150 (81.33%), Query Frame = -3 Query: 164 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLVNYTSNAEKWVYES 613 +ERTF+AIKPDGVQRGL+ EI+ RFERKGFKLV +K + PS+E A +HY +ERPFF GL +F++SGPV+AMVWEG+GVI RKLIGAT P ++EPGTIRGDLAV +GRN+IHGSDGP+TA+ EI LWF PE+L +T + + W ES Sbjct: 3 VERTFVAIKPDGVQRGLVGEILGRFERKGFKLVGLKQLAPSRELAGEHYGVHRERPFFAGLVDFITSGPVVAMVWEGDGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGSDGPDTAQFEINLWFSPEELNAWTPSDQSWRVES 152
BLAST of CF836217 vs. ExPASy Swiss-Prot
Match: NDK_SYNS3 (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain CC9311) GN=ndk PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 4.831e-53 Identity = 96/148 (64.86%), Postives = 121/148 (81.76%), Query Frame = -3 Query: 167 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLVNYTSNAEKWVYE 610 ER+FIAIKPDGVQRGL+ EI+ RFERKGFKLV +K + PS+E A++HY KERPFF GL +F++SGPV+AMVWEG+GVIT RK+IGAT P ++EPGTIRGDLA+ +GRN+IHGSD PETA+ EI LWF P +L ++T + + W E Sbjct: 4 ERSFIAIKPDGVQRGLVGEILGRFERKGFKLVGLKQLTPSRELAEQHYGVHKERPFFGGLVDFITSGPVVAMVWEGDGVITSARKMIGATKPLEAEPGTIRGDLAINIGRNVIHGSDAPETAEFEIGLWFNPSELSDWTPSDQTWRVE 151
BLAST of CF836217 vs. ExPASy Swiss-Prot
Match: NDK_PROMS (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain AS9601) GN=ndk PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 6.309e-53 Identity = 99/149 (66.44%), Postives = 119/149 (79.87%), Query Frame = -3 Query: 164 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLVNYTSNAEKWVYES 610 ERTFIAIKPDGVQRG +SEI+ RFE+KGFKLV +K ++PSKE AQ HY +ERPFF L +F+SSGPV+AMVWEGEGVI RKLIGAT P ++EPGTIRGDLA+ +GRNIIHGSDG +TAK EI LWF E+L + ++ KW E+ Sbjct: 4 ERTFIAIKPDGVQRGYVSEILGRFEKKGFKLVGLKQLIPSKELAQNHYGVHRERPFFGDLVDFISSGPVVAMVWEGEGVILSARKLIGATKPLEAEPGTIRGDLAIDIGRNIIHGSDGEDTAKFEINLWFNEEELCEWETSDSKWRSEN 152
BLAST of CF836217 vs. ExPASy Swiss-Prot
Match: NDK_PROMM (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9313) GN=ndk PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 6.309e-53 Identity = 99/150 (66.00%), Postives = 120/150 (80.00%), Query Frame = -3 Query: 164 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLVNYTSNAEKWVYES 613 MERTF+AIKPDGVQRGL+ EI+ RFERKGFKLV +K V PS++ A +HY +ERPFF GL +F++SGPVIAMVWEG+GVI RKLIGAT P +EPGTIRGDLAV +GRN+IHGSDGP+TA+ EI LWF E+L +T + + W ES Sbjct: 3 MERTFVAIKPDGVQRGLVGEILGRFERKGFKLVGLKQVTPSRDLAGEHYGVHRERPFFAGLVDFITSGPVIAMVWEGDGVIASARKLIGATKPLDAEPGTIRGDLAVNIGRNVIHGSDGPDTAQFEINLWFSAEELNAWTPSDQSWRIES 152
BLAST of CF836217 vs. ExPASy Swiss-Prot
Match: NDK_PROMT (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain NATL2A) GN=ndk PE=3 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 1.406e-52 Identity = 98/149 (65.77%), Postives = 121/149 (81.21%), Query Frame = -3 Query: 167 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLVNYTSNAEKWVYE 613 +ERTF+AIKPDGVQRGLI+EI+ RFE KGFKLV +K + PSKE A+KHY K+RPFF+GL +F++SGPVIAMVWEGEGVI RKLIGAT P ++EPGTIRGDLAV +GRN+IHGSDG +TA EI LWF+ +LV++ + + W E Sbjct: 3 LERTFVAIKPDGVQRGLIAEILGRFETKGFKLVGLKQLTPSKELAEKHYGVHKDRPFFSGLVDFITSGPVIAMVWEGEGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGSDGSDTAVFEINLWFQENELVDWNPSDQAWRVE 151 The following BLAST results are available for this feature:
BLAST of CF836217 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836217 ID=CF836217; Name=CF836217; organism=Citrus sinensis; type=EST; length=786bpback to top |