CF836254 | Citrus Genome Database

Overview


Name	CF836254
Unique Name	CF836254
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	821

Libraries


Library Name	Type
Washington Navel Orange Shoot Meristem cDNA Library	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig7970	contig	Csv1_Contig7970:198..1018.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

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BLAST of CF836254 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 228.794 bits (582), Expect = 2.862e-59
Identity = 113/182 (62.09%), Postives = 137/182 (75.27%), Query Frame = -2

Query:  269 VASGNSEGDALYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFENNPRLEGP 814
            +AS N EGDAL+ LR +L DP+NVLQSWDPTLVNPCTWFH+TCN +N V R+DLGN+ LSG LVPELG L++LQYLELY NNI G IP  LGNL +L+SLDLY N+ SG IP SL KL  L FLRLN+N LTG IP  L  I++L+V+D+S+N L G++P +G F      +F NN  L GP
Sbjct:   23 LASANLEGDALHTLRVTLVDPNNVLQSWDPTLVNPCTWFHVTCNNENSVIRVDLGNAELSGHLVPELGVLKNLQYLELYSNNITGPIPSNLGNLTNLVSLDLYLNSFSGPIPESLGKLSKLRFLRLNNNSLTGSIPMSLTNITTLQVLDLSNNRLSGSVPDNGSFSLFTPISFANNLDLCGP 204

[Close]

BLAST of CF836254 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 4.882e-59
Identity = 110/182 (60.44%), Postives = 141/182 (77.47%), Query Frame = -2

Query:  269 VASGNSEGDALYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFENNPRLEGP 814
            +AS N EGDAL++LR +L DP+NVLQSWDPTLVNPCTWFH+TCN +N V R+DLGN++LSG+LVP+LG+L++LQYLELY NNI G +P +LGNL +L+SLDLY N+ +G IP SL KL  L FLRLN+N LTG IP  L  I +L+V+D+S+N L G++P +G F      +F NN  L GP
Sbjct:   26 LASSNMEGDALHSLRANLVDPNNVLQSWDPTLVNPCTWFHVTCNNENSVIRVDLGNADLSGQLVPQLGQLKNLQYLELYSNNITGPVPSDLGNLTNLVSLDLYLNSFTGPIPDSLGKLFKLRFLRLNNNSLTGPIPMSLTNIMTLQVLDLSNNRLSGSVPDNGSFSLFTPISFANNLDLCGP 207

[Close]

BLAST of CF836254 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 227.254 bits (578), Expect = 8.327e-59
Identity = 109/173 (63.01%), Postives = 136/173 (78.61%), Query Frame = -2

Query:  290 SGNSEGDALYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFEN 808
            SGN+EGDAL AL+ SL+DP+ VLQSWD TLV PCTWFH+TCN DN VTR+DLGN+NLSG+LV +LG+L +LQYLELY NNI GTIP +LGNL  L+SLDLY NN+SG IP +L +LK L FLRLN+N L+G+IPR L  + +L+V+D+S+N L G IP +G F      +F N
Sbjct:   24 SGNAEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCNSDNSVTRVDLGNANLSGQLVMQLGQLPNLQYLELYSNNITGTIPEQLGNLTELVSLDLYLNNLSGPIPSTLGRLKKLRFLRLNNNSLSGEIPRSLTAVLTLQVLDLSNNPLTGDIPVNGSFSLFTPISFAN 196

[Close]

BLAST of CF836254 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 213.001 bits (541), Expect = 1.625e-54
Identity = 110/184 (59.78%), Postives = 135/184 (73.37%), Query Frame = -2

Query:  266 SGNSEGDALYALRRSLSDPD---NVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFENNPRLEGPE 808
            +GN+EGDAL  L+ SLS  D   NVLQSWD TLV PCTWFH+TCN +N+VTR+DLGN+ LSG+LVPELG+L +LQYLELY NNI G IP ELG+L  L+SLDLY N+ISG IP SL KL  L FLRLN+N L+G+IP  L  +  L+V+D+S+N L G IP +G F      +F NN   + PE
Sbjct:   28 AGNAEGDALTQLKNSLSSGDPANNVLQSWDATLVTPCTWFHVTCNPENKVTRVDLGNAKLSGKLVPELGQLLNLQYLELYSNNITGEIPEELGDLVELVSLDLYANSISGPIPSSLGKLGKLRFLRLNNNSLSGEIPMTLTSV-QLQVLDISNNRLSGDIPVNGSFSLFTPISFANNSLTDLPE 210

[Close]

BLAST of CF836254 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 7.066e-50
Identity = 105/190 (55.26%), Postives = 132/190 (69.47%), Query Frame = -2

Query:  269 VAVASGNSEGDALYALRRSLSDPD---NVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFENN---PRLEGP 820
            V+  +G ++ DAL ALR SLS  D   N+LQSW+ T V PC+WFH+TCN +N VTRLDLG++NLSG LVP+L +L +LQYLEL+ NNI G IP ELG+L  L+SLDL+ NNISG IP SL KL  L FLRL +N L+G+IPR L  +  L V+D+S+N L G IP +G F      +F NN   PR   P
Sbjct:   19 VSRVTGKTQVDALIALRSSLSSGDHTNNILQSWNATHVTPCSWFHVTCNTENSVTRLDLGSANLSGELVPQLAQLPNLQYLELFNNNITGEIPEELGDLMELVSLDLFANNISGPIPSSLGKLGKLRFLRLYNNSLSGEIPRSLTAL-PLDVLDISNNRLSGDIPVNGSFSQFTSMSFANNKLRPRPASP 207

[Close]

BLAST of CF836254 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.523e-33
Identity = 79/174 (45.40%), Postives = 104/174 (59.77%), Query Frame = -2

Query:  287 SGNSEGDALYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFENN 808
            S +++GDAL+ALR SL    N L  W+   VNPCTW  + C+  N VT L L + N SG L   +G LE+L+ L L  N I G IP + GNL SL SLDL +N ++G+IP ++  LK L FL L+ N+L G IP  L G+ +L  + + SN L G IP S     IP  NF +N
Sbjct:   26 SPDAQGDALFALRISLRALPNQLSDWNQNQVNPCTWSQVICDDKNFVTSLTLSDMNFSGTLSSRVGILENLKTLTLKGNGITGEIPEDFGNLTSLTSLDLEDNQLTGRIPSTIGNLKKLQFLTLSRNKLNGTIPESLTGLPNLLNLLLDSNSLSGQIPQS--LFEIPKYNFTSN 197

[Close]

BLAST of CF836254 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.173e-28
Identity = 66/156 (42.31%), Postives = 95/156 (60.90%), Query Frame = -2

Query:  335 NSEGDALYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 802
            N E +AL  ++  L DP  V ++WD   V+PC+W  I+C+ DN V  L   + +LSG L   +G L +L+ + L  NNI G IP E+ +L  L +LDL NN  SG+IP S+ +L +L +LRLN+N L+G  P  L  I  L  +D+S N+L G +P
Sbjct:   32 NPEVEALINIKNELHDPHGVFKNWDEFSVDPCSWTMISCSSDNLVIGLGAPSQSLSGTLSGSIGNLTNLRQVSLQNNNISGKIPPEICSLPKLQTLDLSNNRFSGEIPGSVNQLSNLQYLRLNNNSLSGPFPASLSQIPHLSFLDLSYNNLRGPVP 187

[Close]

BLAST of CF836254 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 7.602e-28
Identity = 65/156 (41.67%), Postives = 90/156 (57.69%), Query Frame = -2

Query:  335 NSEGDALYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 802
            N E  AL +++  + D   VL  WD   V+PCTW  + C+ +  V  L++ +  LSG L   +G+L HL  L L  N + G IP ELG L  L +LDL  N  SG+IP SL  L  L +LRL+ N L+GQ+P  + G+S L  +D+S N+L G  P
Sbjct:   37 NYEVAALMSVKNKMKDEKEVLSGWDINSVDPCTWNMVGCSSEGFVVSLEMASKGLSGILSTSIGELTHLHTLLLQNNQLTGPIPSELGQLSELETLDLSGNRFSGEIPASLGFLTHLNYLRLSRNLLSGQVPHLVAGLSGLSFLDLSFNNLSGPTP 192

[Close]

BLAST of CF836254 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 2.212e-27
Identity = 68/179 (37.99%), Postives = 103/179 (57.54%), Query Frame = -2

Query:  269 NSEGDALYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS-GPFEHIPLNNFENNPRLEGP 802
            +S+G AL +L+R      ++  SWDP    PC+W+ ITC+ DNRV  + + ++ L+   +P+L  L  LQ+L L   N+ G IP   G L  L  LDL +N++SG IP  L +L +L FL LN N+L+G IP ++  + +L+V+ +  N L G+IP+S G    +       N  L GP
Sbjct:   28 SSDGQALLSLKRP---SPSLFSSWDPQDQTPCSWYGITCSADNRVISVSIPDTFLNLSSIPDLSSLSSLQFLNLSSTNLSGPIPPSFGKLTHLRLLDLSSNSLSGPIPSELGRLSTLQFLILNANKLSGSIPSQISNLFALQVLCLQDNLLNGSIPSSFGSLVSLQQFRLGGNTNLGGP 203

HSP 2 Score: 87.4261 bits (215), Expect = 1.030e-16
Identity = 51/112 (45.54%), Postives = 64/112 (57.14%), Query Frame = -2

Query:  335 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 670
            +T L    S LSG +    G L +LQ L LY   I GTIP +LG    L +L L+ N ++G IP  L KL+ +  L L  N L+G IP E+   SSL V DVS+NDL G IP
Sbjct:  214 LTTLGFAASGLSGSIPSTFGNLVNLQTLALYDTEISGTIPPQLGLCSELRNLYLHMNKLTGSIPKELGKLQKITSLLLWGNSLSGVIPPEISNCSSLVVFDVSANDLTGDIP 325

HSP 3 Score: 86.6557 bits (213), Expect = 1.757e-16
Identity = 51/136 (37.50%), Postives = 74/136 (54.41%), Query Frame = -2

Query:  335 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNN------------------------IQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 670
            + RL +G + LSG++  E+G+L++L +L+LY N+                        I G IP +LGNL +L  LDL  N+ +G IP S   L  L  L LN+N LTGQIP+ +  +  L ++D+S N L G IP
Sbjct:  454 LVRLRVGENQLSGQIPKEIGELQNLVFLDLYMNHFSGGLPYEISNITVLELLDVHNNYITGDIPAQLGNLVNLEQLDLSRNSFTGNIPLSFGNLSYLNKLILNNNLLTGQIPKSIKNLQKLTLLDLSYNSLSGEIP 589

HSP 4 Score: 85.1149 bits (209), Expect = 5.111e-16
Identity = 47/115 (40.87%), Postives = 69/115 (60.00%), Query Frame = -2

Query:  332 NRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPT 676
            + +  L L  + L+G +  ELGKL+ +  L L+ N++ G IP E+ N  SL+  D+  N+++G IP  L KL  L  L+L+DN  TGQIP EL   SSL  + +  N L G+IP+
Sbjct:  260 SELRNLYLHMNKLTGSIPKELGKLQKITSLLLWGNSLSGVIPPEISNCSSLVVFDVSANDLTGDIPGDLGKLVWLEQLQLSDNMFTGQIPWELSNCSSLIALQLDKNKLSGSIPS 374

HSP 5 Score: 83.9593 bits (206), Expect = 1.139e-15
Identity = 45/110 (40.91%), Postives = 71/110 (64.55%), Query Frame = -2

Query:  335 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKV-VDVSSNDLCGTIP 661
            LD+ N+ ++G +  +LG L +L+ L+L +N+  G IP+  GNL  L  L L NN ++G+IP S+  L+ L  L L+ N L+G+IP+EL  ++SL + +D+S N   G IP
Sbjct:  505 LDVHNNYITGDIPAQLGNLVNLEQLDLSRNSFTGNIPLSFGNLSYLNKLILNNNLLTGQIPKSIKNLQKLTLLDLSYNSLSGEIPQELGQVTSLTINLDLSYNTFTGNIP 614

HSP 6 Score: 82.4185 bits (202), Expect = 3.313e-15
Identity = 46/112 (41.07%), Postives = 66/112 (58.93%), Query Frame = -2

Query:  329 RLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS 664
            +L L ++  +G++  EL     L  L+L KN + G+IP ++GNLKSL S  L+ N+ISG IP S      LV L L+ N+LTG+IP EL  +  L  + +  N L G +P S
Sbjct:  336 QLQLSDNMFTGQIPWELSNCSSLIALQLDKNKLSGSIPSQIGNLKSLQSFFLWENSISGTIPSSFGNCTDLVALDLSRNKLTGRIPEELFSLKRLSKLLLLGNSLSGGLPKS 447

HSP 7 Score: 81.6481 bits (200), Expect = 5.651e-15
Identity = 49/136 (36.03%), Postives = 69/136 (50.74%), Query Frame = -2

Query:  335 LQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 742
            LQ  D        W    C+    +  L L  + LSG +  ++G L+ LQ   L++N+I GTIP   GN   L++LDL  N ++G+IP  L  LK L  L L  N L+G +P+ +    SL  + V  N L G IP
Sbjct:  337 LQLSDNMFTGQIPWELSNCSS---LIALQLDKNKLSGSIPSQIGNLKSLQSFFLWENSISGTIPSSFGNCTDLVALDLSRNKLTGRIPEELFSLKRLSKLLLLGNSLSGGLPKSVAKCQSLVRLRVGENQLSGQIP 469

HSP 8 Score: 80.8777 bits (198), Expect = 9.639e-15
Identity = 42/115 (36.52%), Postives = 71/115 (61.74%), Query Frame = -2

Query:  329 RVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS 673
            R+++L L  ++LSG L   + K + L  L + +N + G IP E+G L++L+ LDLY N+ SG +P  ++ +  L  L +++N +TG IP +L  + +L+ +D+S N   G IP S
Sbjct:  429 RLSKLLLLGNSLSGGLPKSVAKCQSLVRLRVGENQLSGQIPKEIGELQNLVFLDLYMNHFSGGLPYEISNITVLELLDVHNNYITGDIPAQLGNLVNLEQLDLSRNSFTGNIPLS 543

HSP 9 Score: 78.5666 bits (192), Expect = 4.784e-14
Identity = 41/109 (37.61%), Postives = 67/109 (61.47%), Query Frame = -2

Query:  335 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 661
            LDL  + L+GR+  EL  L+ L  L L  N++ G +P  +   +SL+ L +  N +SG+IP  + +L++LVFL L  N  +G +P E+  I+ L+++DV +N + G IP
Sbjct:  409 LDLSRNKLTGRIPEELFSLKRLSKLLLLGNSLSGGLPKSVAKCQSLVRLRVGENQLSGQIPKEIGELQNLVFLDLYMNHFSGGLPYEISNITVLELLDVHNNYITGDIP 517

HSP 10 Score: 77.7962 bits (190), Expect = 8.160e-14
Identity = 44/108 (40.74%), Postives = 61/108 (56.48%), Query Frame = -2

Query:  335 DLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 658
            D+  ++L+G +  +LGKL  L+ L+L  N   G IP EL N  SLI+L L  N +SG IP  +  LKSL    L +N ++G IP      + L  +D+S N L G IP
Sbjct:  314 DVSANDLTGDIPGDLGKLVWLEQLQLSDNMFTGQIPWELSNCSSLIALQLDKNKLSGSIPSQIGNLKSLQSFFLWENSISGTIPSSFGNCTDLVALDLSRNKLTGRIP 421

HSP 11 Score: 75.8702 bits (185), Expect = 3.101e-13
Identity = 41/115 (35.65%), Postives = 68/115 (59.13%), Query Frame = -2

Query:  329 RVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS 673
            ++T L L  ++LSG + PE+     L   ++  N++ G IP +LG L  L  L L +N  +G+IP  L+   SL+ L+L+ N+L+G IP ++  + SL+   +  N + GTIP+S
Sbjct:  285 KITSLLLWGNSLSGVIPPEISNCSSLVVFDVSANDLTGDIPGDLGKLVWLEQLQLSDNMFTGQIPWELSNCSSLIALQLDKNKLSGSIPSQIGNLKSLQSFFLWENSISGTIPSS 399

HSP 12 Score: 73.9442 bits (180), Expect = 1.178e-12
Identity = 47/129 (36.43%), Postives = 69/129 (53.49%), Query Frame = -2

Query:  296 RLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSL-VFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFE-----HIPLNNF 664
            +LDL  ++ +G +    G L +L  L L  N + G IP  + NL+ L  LDL  N++SG+IP  L ++ SL + L L+ N  TG IP     ++ L+ +D+SSN L G I   G        +I  NNF
Sbjct:  528 QLDLSRNSFTGNIPLSFGNLSYLNKLILNNNLLTGQIPKSIKNLQKLTLLDLSYNSLSGEIPQELGQVTSLTINLDLSYNTFTGNIPETFSDLTQLQSLDLSSNSLHGDIKVLGSLTSLASLNISCNNF 656

[Close]

BLAST of CF836254 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.927e-27
Identity = 77/196 (39.29%), Postives = 107/196 (54.59%), Query Frame = -2

Query:  248 VAVASGNSEGDALYALRRSLSD-PDNVLQSW--DPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS--GPFEHIPLNNFENNPRLEGPELLGLAS 820
            ++V+  NS+G  L +L + L   P  V  +W  + +   PC WF ITC+    V  L+   S +SG+L PE+G+L+ LQ L+L  NN  GTIP  LGN   L +LDL  N  S KIP +L  LK L  L L  N LTG++P  L  I  L+V+ +  N+L G IP S     E + L+ + N      PE +G +S
Sbjct:   24 ISVSCLNSDGLTLLSLLKHLDRVPPQVTSTWKINASEATPCNWFGITCDDSKNVASLNFTRSRVSGQLGPEIGELKSLQILDLSTNNFSGTIPSTLGNCTKLATLDLSENGFSDKIPDTLDSLKRLEVLYLYINFLTGELPESLFRIPKLQVLYLDYNNLTGPIPQSIGDAKELVELSMYANQFSGNIPESIGNSS 219

HSP 2 Score: 83.9593 bits (206), Expect = 1.139e-15
Identity = 50/147 (34.01%), Postives = 78/147 (53.06%), Query Frame = -2

Query:  329 RSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS 769
            R L+   N+L    P  +  C            + R  L  +NLSG L+PE  +   L +L+   NN +G IP  LG+ K+L S++L  N  +G+IPP L  L++L ++ L+ N L G +P +L    SL+  DV  N L G++P++
Sbjct:  462 RILNLGSNLLHGTIPASIGHC----------KTIRRFILRENNLSG-LLPEFSQDHSLSFLDFNSNNFEGPIPGSLGSCKNLSSINLSRNRFTGQIPPQLGNLQNLGYMNLSRNLLEGSLPAQLSNCVSLERFDVGFNSLNGSVPSN 597

HSP 3 Score: 83.1889 bits (204), Expect = 1.942e-15
Identity = 46/114 (40.35%), Postives = 70/114 (61.40%), Query Frame = -2

Query:  329 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS 670
            +T L +GN++L G +       ++L  L+L  N  +G +P  LGN  SL +L + + N+SG IP SL  LK+L  L L++NRL+G IP EL   SSL ++ ++ N L G IP++
Sbjct:  245 LTTLFVGNNSLQGPVRFGSPNCKNLLTLDLSYNEFEGGVPPALGNCSSLDALVIVSGNLSGTIPSSLGMLKNLTILNLSENRLSGSIPAELGNCSSLNLLKLNDNQLVGGIPSA 358

HSP 4 Score: 81.6481 bits (200), Expect = 5.651e-15
Identity = 44/112 (39.29%), Postives = 64/112 (57.14%), Query Frame = -2

Query:  335 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 670
            +T L+L  + LSG +  ELG    L  L+L  N + G IP  LG L+ L SL+L+ N  SG+IP  + K +SL  L +  N LTG++P E+  +  LK+  + +N   G IP
Sbjct:  317 LTILNLSENRLSGSIPAELGNCSSLNLLKLNDNQLVGGIPSALGKLRKLESLELFENRFSGEIPIEIWKSQSLTQLLVYQNNLTGELPVEMTEMKKLKIATLFNNSFYGAIP 428

HSP 5 Score: 80.4925 bits (197), Expect = 1.259e-14
Identity = 45/105 (42.86%), Postives = 63/105 (60.00%), Query Frame = -2

Query:  335 NSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 649
            + NLSG +   LG L++L  L L +N + G+IP ELGN  SL  L L +N + G IP +L KL+ L  L L +NR +G+IP E+    SL  + V  N+L G +P
Sbjct:  300 SGNLSGTIPSSLGMLKNLTILNLSENRLSGSIPAELGNCSSLNLLKLNDNQLVGGIPSALGKLRKLESLELFENRFSGEIPIEIWKSQSLTQLLVYQNNLTGELP 404

HSP 6 Score: 79.7221 bits (195), Expect = 2.147e-14
Identity = 44/109 (40.37%), Postives = 58/109 (53.21%), Query Frame = -2

Query:  335 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 661
            LDL  +   G + P LG    L  L +   N+ GTIP  LG LK+L  L+L  N +SG IP  L    SL  L+LNDN+L G IP  L  +  L+ +++  N   G IP
Sbjct:  272 LDLSYNEFEGGVPPALGNCSSLDALVIVSGNLSGTIPSSLGMLKNLTILNLSENRLSGSIPAELGNCSSLNLLKLNDNQLVGGIPSALGKLRKLESLELFENRFSGEIP 380

HSP 7 Score: 78.5666 bits (192), Expect = 4.784e-14
Identity = 36/114 (31.58%), Postives = 70/114 (61.40%), Query Frame = -2

Query:  329 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS 670
            ++ ++L  +  +G++ P+LG L++L Y+ L +N ++G++P +L N  SL   D+  N+++G +P + +  K L  L L++NR +G IP+ L  +  L  + ++ N   G IP+S
Sbjct:  532 LSSINLSRNRFTGQIPPQLGNLQNLGYMNLSRNLLEGSLPAQLSNCVSLERFDVGFNSLNGSVPSNFSNWKGLTTLVLSENRFSGGIPQFLPELKKLSTLQIARNAFGGEIPSS 645

HSP 8 Score: 77.7962 bits (190), Expect = 8.160e-14
Identity = 43/115 (37.39%), Postives = 66/115 (57.39%), Query Frame = -2

Query:  329 RVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS 673
            ++  L+L  +  SG +  E+ K + L  L +Y+NN+ G +PVE+  +K L    L+NN+  G IPP L    SL  +    N+LTG+IP  L     L+++++ SN L GTIP S
Sbjct:  364 KLESLELFENRFSGEIPIEIWKSQSLTQLLVYQNNLTGELPVEMTEMKKLKIATLFNNSFYGAIPPGLGVNSSLEEVDFIGNKLTGEIPPNLCHGRKLRILNLGSNLLHGTIPAS 478

HSP 9 Score: 77.411 bits (189), Expect = 1.066e-13
Identity = 43/109 (39.45%), Postives = 62/109 (56.88%), Query Frame = -2

Query:  335 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 661
            L L ++ L G +   LGKL  L+ LEL++N   G IP+E+   +SL  L +Y NN++G++P  + ++K L    L +N   G IP  L   SSL+ VD   N L G IP
Sbjct:  344 LKLNDNQLVGGIPSALGKLRKLESLELFENRFSGEIPIEIWKSQSLTQLLVYQNNLTGELPVEMTEMKKLKIATLFNNSFYGAIPPGLGVNSSLEEVDFIGNKLTGEIP 452

HSP 10 Score: 70.0922 bits (170), Expect = 1.701e-11
Identity = 49/134 (36.57%), Postives = 73/134 (54.48%), Query Frame = -2

Query:  278 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLI-SLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS--GPFEHIPLNNFENNPRL 670
            +T L L  +  SG +   L +L+ L  L++ +N   G IP  +G ++ LI  LDL  N ++G+IP  L  L  L  L +++N LTG +   L G++SL  VDVS+N   G IP +  G     P ++F  NP L
Sbjct:  604 LTTLVLSENRFSGGIPQFLPELKKLSTLQIARNAFGGEIPSSIGLIEDLIYDLDLSGNGLTGEIPAKLGDLIKLTRLNISNNNLTGSL-SVLKGLTSLLHVDVSNNQFTGPIPDNLEGQLLSEP-SSFSGNPNL 735

HSP 11 Score: 69.3218 bits (168), Expect = 2.902e-11
Identity = 41/134 (30.60%), Postives = 69/134 (51.49%), Query Frame = -2

Query:  269 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFENNPRLEGP 670
            +T+L +  +NL+G L  E+ +++ L+   L+ N+  G IP  LG   SL  +D   N ++G+IPP+L   + L  L L  N L G IP  +    +++   +  N+L G +P       +   +F +N   EGP
Sbjct:  389 LTQLLVYQNNLTGELPVEMTEMKKLKIATLFNNSFYGAIPPGLGVNSSLEEVDFIGNKLTGEIPPNLCHGRKLRILNLGSNLLHGTIPASIGHCKTIRRFILRENNLSGLLPEFSQDHSLSFLDFNSN-NFEGP 521

The following BLAST results are available for this feature:

BLAST of CF836254 vs. ExPASy Swiss-Prot

BLAST of CF836254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113


Match Name	E-value	Identity	Description
SERK1_ARATH	2.862e-59	62.09	Somatic embryogenesis receptor kinase 1 OS=Arabido...	[more]
SERK2_ARATH	4.882e-59	60.44	Somatic embryogenesis receptor kinase 2 OS=Arabido...	[more]
BAK1_ARATH	8.327e-59	63.01	BRASSINOSTEROID INSENSITIVE 1-associated receptor ...	[more]
SERK4_ARATH	1.625e-54	59.78	Somatic embryogenesis receptor kinase 4 OS=Arabido...	[more]
SERK5_ARATH	7.066e-50	55.26	Somatic embryogenesis receptor kinase 5 OS=Arabido...	[more]
Y5129_ARATH	3.523e-33	45.40	Probable LRR receptor-like serine/threonine-protei...	[more]
Y2239_ARATH	1.173e-28	42.31	Probable LRR receptor-like serine/threonine-protei...	[more]
Y5457_ARATH	7.602e-28	41.67	Probable LRR receptor-like serine/threonine-protei...	[more]
Y1341_ARATH	2.212e-27	37.99	Probable LRR receptor-like serine/threonine-protei...	[more]
PEPR1_ARATH	4.927e-27	39.29	Leucine-rich repeat receptor-like protein kinase P...	[more]

Pages

Properties


Property Name	Value
Genbank description	UCRCS03_02K18_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02K18, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF836254 ID=CF836254; Name=CF836254; organism=Citrus sinensis; type=EST; length=821bp
TTTTTTTTTTTTTTTTACATCTAAAATTCTCATCTTGAAAGTTGAACCTT
TTTTATGAAGATCACAACGACGCTATTACAGATGCATTTAAGCAGTATAA
TACAATTTACATATATGATGGCTTCATTTCACCAATAACACTACGCTTTT
TAGGTAAAGACGCTTTCGATCTTCGCGGACACATCTATTCGAAACCTGAG
TAGAGCTTGAAGCAACAATCAATCGTTTATGAGCAGTTTGTGTCATAACT
TGCAAGTCCCAGCAACTCTGGACCTTCTAATCGAGGGTTATTCTCAAAGT
TGTTGAGTGGGATGTGTTCAAATGGTCCGCTTGTAGGAATTGTTCCACAC
AGATCATTGCTTGAAACATCCACAACTTTGAGACTTGAAATTCCAACAAG
TTCCCTGGGAATTTGTCCAGTTAGCCGATTATCGTTAAGCCGCAAAAAAA
CAAGAGATTTCAATTTAGCCAAGGAAGGAGGGATTTTCCCCGAGATGTTG
TTATTATACAAGTCCAAGCTGATGAGGCTCTTCAAGTTACCGAGCTCGAC
AGGGATAGTTCCTTGGATGTTGTTTTTGTAAAGTTCCAGGTATTGCAAAT
GCTCGAGCTTGCCCAGTTCAGGGACGAGACGGCCGGATAGATTTGAATTA
CCCAAATCCAGTCGAGTAACGCGGTTGTCCTGATTACAGGTTATGTGAAA
CCAAGTGCAGGGATTGACGAGAGTTGGATCCCAGCTCTGAAGCACGTTAT
CGGGATCTGATAAGCTTCTCCTGAGCGCGTACAGCGCGTCCCCTTCCGAG
TTTCCACTCGCCACCGCCACC