CF836270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF836270 vs. ExPASy Swiss-Prot
Match: TM165_RAT (Transmembrane protein 165 OS=Rattus norvegicus GN=Tmem165 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.811e-18 Identity = 42/69 (60.87%), Postives = 53/69 (76.81%), Query Frame = -1 Query: 9 TFLAEWGDRSQIATIDLATHKNAVGVAVVSTIGHTICTSLAVVGGSMLASKISQRTVATIGGLIFRSFS 215 TFLAEWGDRSQ+ TI LA ++ GVAV T+GH +CT LAV+GG M+A KIS RTV IGG++F +F+ Sbjct: 243 TFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFLAFA 311
BLAST of CF836270 vs. ExPASy Swiss-Prot
Match: TM165_MOUSE (Transmembrane protein 165 OS=Mus musculus GN=Tmem165 PE=2 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 2.811e-18 Identity = 42/69 (60.87%), Postives = 53/69 (76.81%), Query Frame = -1 Query: 9 TFLAEWGDRSQIATIDLATHKNAVGVAVVSTIGHTICTSLAVVGGSMLASKISQRTVATIGGLIFRSFS 215 TFLAEWGDRSQ+ TI LA ++ GVAV T+GH +CT LAV+GG M+A KIS RTV IGG++F +F+ Sbjct: 243 TFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFLAFA 311
BLAST of CF836270 vs. ExPASy Swiss-Prot
Match: TM165_HUMAN (Transmembrane protein 165 OS=Homo sapiens GN=TMEM165 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.811e-18 Identity = 42/69 (60.87%), Postives = 53/69 (76.81%), Query Frame = -1 Query: 9 TFLAEWGDRSQIATIDLATHKNAVGVAVVSTIGHTICTSLAVVGGSMLASKISQRTVATIGGLIFRSFS 215 TFLAEWGDRSQ+ TI LA ++ GVAV T+GH +CT LAV+GG M+A KIS RTV IGG++F +F+ Sbjct: 244 TFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFLAFA 312
BLAST of CF836270 vs. ExPASy Swiss-Prot
Match: Y615_SYNY3 (UPF0016 membrane protein sll0615 OS=Synechocystis sp. (strain PCC 6803) GN=sll0615 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.436e-16 Identity = 39/69 (56.52%), Postives = 52/69 (75.36%), Query Frame = -1 Query: 9 TFLAEWGDRSQIATIDLATHKNAVGVAVVSTIGHTICTSLAVVGGSMLASKISQRTVATIGGLIFRSFS 215 TF+AEWGDR+QIATI LA NA GV+ + +GHTIC +AV+GG +A +IS++TV IGGL+F F+ Sbjct: 129 TFVAEWGDRTQIATIALAASNNAWGVSAGAILGHTICAVIAVMGGKFVAGRISEKTVTLIGGLLFYLFA 197
BLAST of CF836270 vs. ExPASy Swiss-Prot
Match: YD68_SCHPO (UPF0016 membrane protein C17G8.08c OS=Schizosaccharomyces pombe GN=SPAC17G8.08c PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.644e-13 Identity = 33/68 (48.53%), Postives = 47/68 (69.12%), Query Frame = -1 Query: 12 TFLAEWGDRSQIATIDLATHKNAVGVAVVSTIGHTICTSLAVVGGSMLASKISQRTVATIGGLIFRSF 215 TF++EWGDRSQIATI +A N GV + + +GH CT+LAV+ G +++KI V IGG++F +F Sbjct: 210 TFVSEWGDRSQIATIAMAASDNVYGVFMGANVGHACCTALAVISGKYISTKIKVHKVMFIGGILFIAF 277 The following BLAST results are available for this feature:
BLAST of CF836270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF836270 ID=CF836270; Name=CF836270; organism=Citrus sinensis; type=EST; length=215bpback to top |