CF836272
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836272 vs. ExPASy Swiss-Prot
Match: CAPZB_ARATH (Probable F-actin-capping protein subunit beta OS=Arabidopsis thaliana GN=At1g71790 PE=2 SV=1) HSP 1 Score: 251.521 bits (641), Expect = 2.974e-66 Identity = 120/150 (80.00%), Postives = 136/150 (90.67%), Query Frame = 2 Query: 2 YEGAFSSVYMWEDDNEGFVACFLIKKDGSKTAQGRRRHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQMNMDLSVSEGHLCNMGKMIEEMEGKLRNSLDQVYFGKTKEMVCTLRPPSEVI-MRLPDS 448 YEG SSVYMWEDDNEGFVACFLIKKDGSK+ GRR LEEGAWDAIHVI+V EEE +A+YCLTST+MLSLTTD ESSG F LSGSIRRQM M+L+V++GHLCNMG+MIEE+EGKLRNSLDQVYFGKT+EMVCTLRPP+E++ MRLPD+ Sbjct: 107 YEGGISSVYMWEDDNEGFVACFLIKKDGSKSGHGRRGCLEEGAWDAIHVIQVGSEEEEMAQYCLTSTIMLSLTTDDESSGKFGLSGSIRRQMKMELAVADGHLCNMGRMIEELEGKLRNSLDQVYFGKTREMVCTLRPPAEIVQMRLPDT 256
BLAST of CF836272 vs. ExPASy Swiss-Prot
Match: CAPZB_DROME (F-actin-capping protein subunit beta OS=Drosophila melanogaster GN=cpb PE=1 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.704e-29 Identity = 73/142 (51.41%), Postives = 95/142 (66.90%), Query Frame = 2 Query: 2 YEGAFSSVYMWEDDNEGFVACFLIKK--DGSKTAQGRRRHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQMNMDLSVSEG--HLCNMGKMIEEMEGKLRNSLDQVYFGKTKEMVCTLR 412 YEG SSVY+W+ D+ GF A LIKK DGSK +G WD+IHV+EV + G A Y LTST ML L T+ + SGT +L GS+ RQ D +VSE H+ N+GKM+EEME K+RN+L+++YFGKTK++V LR Sbjct: 112 YEGGVSSVYLWDLDH-GFAAVILIKKAGDGSKMIRG--------CWDSIHVVEVQEKTTGRTAHYKLTSTAMLWLQTNKQGSGTMNLGGSLTRQQEQDANVSESSPHIANIGKMVEEMENKIRNTLNEIYFGKTKDIVNGLR 244
BLAST of CF836272 vs. ExPASy Swiss-Prot
Match: CAPZB_CHICK (F-actin-capping protein subunit beta isoforms 1 and 2 OS=Gallus gallus GN=CAPZB PE=1 SV=3) HSP 1 Score: 121.709 bits (304), Expect = 3.554e-27 Identity = 68/142 (47.89%), Postives = 95/142 (66.90%), Query Frame = 2 Query: 2 YEGAFSSVYMWEDDNEGFVACFLIKK--DGSKTAQGRRRHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQMNMDLSVSEG--HLCNMGKMIEEMEGKLRNSLDQVYFGKTKEMVCTLR 412 +EG SSVY+W+ D+ GF LIKK DGSK +G WD+IHV+EV + G A Y LTSTVML L T+ SGT +L GS+ RQM D +VS+ H+ N+G+++E+ME K+R++L+++YFGKTK++V LR Sbjct: 112 FEGGVSSVYLWDLDH-GFAGVILIKKAGDGSKKIKG--------CWDSIHVVEVQEKSSGRTAHYKLTSTVMLWLQTNKTGSGTMNLGGSLTRQMEKDETVSDSSPHIANIGRLVEDMENKIRSTLNEIYFGKTKDIVNGLR 244
BLAST of CF836272 vs. ExPASy Swiss-Prot
Match: CAPZB_RAT (F-actin-capping protein subunit beta OS=Rattus norvegicus GN=Capzb PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.641e-27 Identity = 68/142 (47.89%), Postives = 95/142 (66.90%), Query Frame = 2 Query: 2 YEGAFSSVYMWEDDNEGFVACFLIKK--DGSKTAQGRRRHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQMNMDLSVSE--GHLCNMGKMIEEMEGKLRNSLDQVYFGKTKEMVCTLR 412 +EG SSVY+W+ D+ GF LIKK DGSK +G WD+IHV+EV + G A Y LTSTVML L T+ SGT +L GS+ RQM D +VS+ H+ N+G+++E+ME K+R++L+++YFGKTK++V LR Sbjct: 112 FEGGVSSVYLWDLDH-GFAGVILIKKAGDGSKKIKG--------CWDSIHVVEVQEKSSGRTAHYKLTSTVMLWLQTNKSGSGTMNLGGSLTRQMEKDETVSDCSPHIANIGRLVEDMENKIRSTLNEIYFGKTKDIVNGLR 244
BLAST of CF836272 vs. ExPASy Swiss-Prot
Match: CAPZB_PONAB (F-actin-capping protein subunit beta OS=Pongo abelii GN=CAPZB PE=2 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 4.641e-27 Identity = 68/142 (47.89%), Postives = 95/142 (66.90%), Query Frame = 2 Query: 2 YEGAFSSVYMWEDDNEGFVACFLIKK--DGSKTAQGRRRHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQMNMDLSVSE--GHLCNMGKMIEEMEGKLRNSLDQVYFGKTKEMVCTLR 412 +EG SSVY+W+ D+ GF LIKK DGSK +G WD+IHV+EV + G A Y LTSTVML L T+ SGT +L GS+ RQM D +VS+ H+ N+G+++E+ME K+R++L+++YFGKTK++V LR Sbjct: 112 FEGGVSSVYLWDLDH-GFAGVILIKKAGDGSKKIKG--------CWDSIHVVEVQEKSSGRTAHYKLTSTVMLWLQTNKSGSGTMNLGGSLTRQMEKDETVSDCSPHIANIGRLVEDMENKIRSTLNEIYFGKTKDIVNGLR 244
BLAST of CF836272 vs. ExPASy Swiss-Prot
Match: CAPZB_PIG (F-actin-capping protein subunit beta OS=Sus scrofa GN=CAPZB PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.641e-27 Identity = 68/142 (47.89%), Postives = 95/142 (66.90%), Query Frame = 2 Query: 2 YEGAFSSVYMWEDDNEGFVACFLIKK--DGSKTAQGRRRHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQMNMDLSVSE--GHLCNMGKMIEEMEGKLRNSLDQVYFGKTKEMVCTLR 412 +EG SSVY+W+ D+ GF LIKK DGSK +G WD+IHV+EV + G A Y LTSTVML L T+ SGT +L GS+ RQM D +VS+ H+ N+G+++E+ME K+R++L+++YFGKTK++V LR Sbjct: 112 FEGGVSSVYLWDLDH-GFAGVILIKKAGDGSKKIKG--------CWDSIHVVEVQEKSSGRTAHYKLTSTVMLWLQTNKSGSGTMNLGGSLTRQMEKDETVSDCSPHIANIGRLVEDMENKIRSTLNEIYFGKTKDIVNGLR 244
BLAST of CF836272 vs. ExPASy Swiss-Prot
Match: CAPZB_MOUSE (F-actin-capping protein subunit beta OS=Mus musculus GN=Capzb PE=1 SV=3) HSP 1 Score: 121.324 bits (303), Expect = 4.641e-27 Identity = 68/142 (47.89%), Postives = 95/142 (66.90%), Query Frame = 2 Query: 2 YEGAFSSVYMWEDDNEGFVACFLIKK--DGSKTAQGRRRHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQMNMDLSVSE--GHLCNMGKMIEEMEGKLRNSLDQVYFGKTKEMVCTLR 412 +EG SSVY+W+ D+ GF LIKK DGSK +G WD+IHV+EV + G A Y LTSTVML L T+ SGT +L GS+ RQM D +VS+ H+ N+G+++E+ME K+R++L+++YFGKTK++V LR Sbjct: 112 FEGGVSSVYLWDLDH-GFAGVILIKKAGDGSKKIKG--------CWDSIHVVEVQEKSSGRTAHYKLTSTVMLWLQTNKSGSGTMNLGGSLTRQMEKDETVSDCSPHIANIGRLVEDMENKIRSTLNEIYFGKTKDIVNGLR 244
BLAST of CF836272 vs. ExPASy Swiss-Prot
Match: CAPZB_HUMAN (F-actin-capping protein subunit beta OS=Homo sapiens GN=CAPZB PE=1 SV=4) HSP 1 Score: 121.324 bits (303), Expect = 4.641e-27 Identity = 68/142 (47.89%), Postives = 95/142 (66.90%), Query Frame = 2 Query: 2 YEGAFSSVYMWEDDNEGFVACFLIKK--DGSKTAQGRRRHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQMNMDLSVSE--GHLCNMGKMIEEMEGKLRNSLDQVYFGKTKEMVCTLR 412 +EG SSVY+W+ D+ GF LIKK DGSK +G WD+IHV+EV + G A Y LTSTVML L T+ SGT +L GS+ RQM D +VS+ H+ N+G+++E+ME K+R++L+++YFGKTK++V LR Sbjct: 112 FEGGVSSVYLWDLDH-GFAGVILIKKAGDGSKKIKG--------CWDSIHVVEVQEKSSGRTAHYKLTSTVMLWLQTNKSGSGTMNLGGSLTRQMEKDETVSDCSPHIANIGRLVEDMENKIRSTLNEIYFGKTKDIVNGLR 244
BLAST of CF836272 vs. ExPASy Swiss-Prot
Match: CAPZB_BOVIN (F-actin-capping protein subunit beta OS=Bos taurus GN=CAPZB PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.641e-27 Identity = 68/142 (47.89%), Postives = 95/142 (66.90%), Query Frame = 2 Query: 2 YEGAFSSVYMWEDDNEGFVACFLIKK--DGSKTAQGRRRHLEEGAWDAIHVIEVAPEEEG-IARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQMNMDLSVSE--GHLCNMGKMIEEMEGKLRNSLDQVYFGKTKEMVCTLR 412 +EG SSVY+W+ D+ GF LIKK DGSK +G WD+IHV+EV + G A Y LTSTVML L T+ SGT +L GS+ RQM D +VS+ H+ N+G+++E+ME K+R++L+++YFGKTK++V LR Sbjct: 141 FEGGVSSVYLWDLDH-GFAGVILIKKAGDGSKKIKG--------CWDSIHVVEVQEKSSGRTAHYKLTSTVMLWLQTNKSGSGTMNLGGSLTRQMEKDETVSDCSPHIANIGRLVEDMENKIRSTLNEIYFGKTKDIVNGLR 273
BLAST of CF836272 vs. ExPASy Swiss-Prot
Match: CAPZB_DICDI (F-actin-capping protein subunit beta OS=Dictyostelium discoideum GN=acpA PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.303e-26 Identity = 70/142 (49.30%), Postives = 95/142 (66.90%), Query Frame = 2 Query: 2 YEGAFSSVYMWE-DDNEGFVACFLIKK--DGSKTAQGRRRHLEEGAWDAIHVIEVAPEEEGIARYCLTSTVMLSLTTDHESSGTFSLSGSIRRQMNMDLSVSE--GHLCNMGKMIEEMEGKLRNSLDQVYFGKTKEMVCTLR 412 +EG SSVY W+ DDN F A L+KK D SK Q R G WD+IHV+EV ++ A Y LTSTVMLS+ TD++++G +L+GS+ RQ + + +E H N+GKM+E+ME KLR +L+ +YFGKTKE+V TLR Sbjct: 112 FEGGVSSVYCWDLDDN--FAAVVLMKKTQDQSKKGQPMR-----GTWDSIHVVEVKLGKKDKAVYKLTSTVMLSIETDNDNTGKVNLAGSLTRQDEKEYTFNEVDTHCVNIGKMVEDMESKLRQTLETIYFGKTKEVVNTLR 246 The following BLAST results are available for this feature:
BLAST of CF836272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836272 ID=CF836272; Name=CF836272; organism=Citrus sinensis; type=EST; length=680bpback to top |